RNA–Protein interactions for RNA: ENST00000546911.5

LINC02396-201, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 3

Gene LINC02396, Length 300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-201ENST00000546911 TM4SF1P30408 202 aa12.97□□□□□ -0.33
LINC02396-201ENST00000546911 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
LINC02396-201ENST00000546911 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
LINC02396-201ENST00000546911 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
LINC02396-201ENST00000546911 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
LINC02396-201ENST00000546911 TGFB2P61812 414 aa12.96□□□□□ -0.33
LINC02396-201ENST00000546911 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
LINC02396-201ENST00000546911 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
LINC02396-201ENST00000546911 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
LINC02396-201ENST00000546911 A1BGP04217 495 aa12.95□□□□□ -0.34
LINC02396-201ENST00000546911 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
LINC02396-201ENST00000546911 TJP1Q07157 1748 aa12.95□□□□□ -0.34
LINC02396-201ENST00000546911 CICQ96RK0 1608 aaPredicted RBP12.95□□□□□ -0.34
LINC02396-201ENST00000546911 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
LINC02396-201ENST00000546911 IL6STP40189 918 aaPredicted RBP12.94□□□□□ -0.34
LINC02396-201ENST00000546911 DDR1Q08345 913 aa12.94□□□□□ -0.34
LINC02396-201ENST00000546911 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
LINC02396-201ENST00000546911 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
LINC02396-201ENST00000546911 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
LINC02396-201ENST00000546911 A0A087WZG4 1122 aa12.93□□□□□ -0.34
LINC02396-201ENST00000546911 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
LINC02396-201ENST00000546911 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
LINC02396-201ENST00000546911 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
LINC02396-201ENST00000546911 COL15A1P39059 1388 aa12.93□□□□□ -0.34
LINC02396-201ENST00000546911 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
LINC02396-201ENST00000546911 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
LINC02396-201ENST00000546911 KCNA3P22001 575 aa12.92□□□□□ -0.34
LINC02396-201ENST00000546911 RIPK4P57078 832 aa12.92□□□□□ -0.34
LINC02396-201ENST00000546911 NFIXQ14938 502 aa12.92□□□□□ -0.34
LINC02396-201ENST00000546911 DPEP1P16444 411 aa12.91□□□□□ -0.34
LINC02396-201ENST00000546911 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
LINC02396-201ENST00000546911 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
LINC02396-201ENST00000546911 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
LINC02396-201ENST00000546911 WWC3Q9ULE0 1092 aa12.91□□□□□ -0.34
LINC02396-201ENST00000546911 ADAMTS8Q9UP79 889 aa12.91□□□□□ -0.34
LINC02396-201ENST00000546911 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
LINC02396-201ENST00000546911 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
LINC02396-201ENST00000546911 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
LINC02396-201ENST00000546911 SERPINB2P05120 415 aa12.9□□□□□ -0.34
LINC02396-201ENST00000546911 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
LINC02396-201ENST00000546911 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
LINC02396-201ENST00000546911 GIGYF1O75420 1035 aaPredicted RBP12.89□□□□□ -0.35
LINC02396-201ENST00000546911 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC02396-201ENST00000546911 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
LINC02396-201ENST00000546911 RUNDC1Q96C34 613 aa12.89□□□□□ -0.35
LINC02396-201ENST00000546911 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
LINC02396-201ENST00000546911 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
LINC02396-201ENST00000546911 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 NBPF10Q6P3W6 841 aaKnown RBP12.88□□□□□ -0.35
LINC02396-201ENST00000546911 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 NBPF15Q8N660 670 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
LINC02396-201ENST00000546911 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
LINC02396-201ENST00000546911 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
LINC02396-201ENST00000546911 DZIP3Q86Y13 1208 aaKnown RBP12.87□□□□□ -0.35
LINC02396-201ENST00000546911 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
LINC02396-201ENST00000546911 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
LINC02396-201ENST00000546911 BCS1LQ9Y276 419 aa12.87□□□□□ -0.35
LINC02396-201ENST00000546911 CHD4Q14839 1912 aa12.87□□□□□ -0.35
LINC02396-201ENST00000546911 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
LINC02396-201ENST00000546911 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
LINC02396-201ENST00000546911 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
LINC02396-201ENST00000546911 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
LINC02396-201ENST00000546911 CHRNA5P30532 468 aa12.85□□□□□ -0.35
LINC02396-201ENST00000546911 SETDB2Q96T68 719 aa12.85□□□□□ -0.35
LINC02396-201ENST00000546911 TSPYL4Q9UJ04 414 aa12.85□□□□□ -0.35
LINC02396-201ENST00000546911 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
LINC02396-201ENST00000546911 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
LINC02396-201ENST00000546911 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
LINC02396-201ENST00000546911 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
LINC02396-201ENST00000546911 CHL1O00533 1208 aa12.83□□□□□ -0.36
LINC02396-201ENST00000546911 RGL2O15211 777 aa12.83□□□□□ -0.36
LINC02396-201ENST00000546911 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
LINC02396-201ENST00000546911 DLG5Q8TDM6 1919 aa12.83□□□□□ -0.36
LINC02396-201ENST00000546911 H0YIN7 160 aa12.82□□□□□ -0.36
LINC02396-201ENST00000546911 CCDC184Q52MB2 194 aa12.82□□□□□ -0.36
LINC02396-201ENST00000546911 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
LINC02396-201ENST00000546911 ZNF652Q9Y2D9 606 aa12.82□□□□□ -0.36
LINC02396-201ENST00000546911 APAF1O14727 1248 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 HLFQ16534 295 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
LINC02396-201ENST00000546911 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
LINC02396-201ENST00000546911 ERVV-1B6SEH8 477 aa12.8□□□□□ -0.36
LINC02396-201ENST00000546911 MYL6BP14649 208 aa12.8□□□□□ -0.36
LINC02396-201ENST00000546911 PDE6BP35913 854 aa12.8□□□□□ -0.36
LINC02396-201ENST00000546911 PDIA6Q15084 440 aa12.8□□□□□ -0.36
LINC02396-201ENST00000546911 TTLL7Q6ZT98 887 aa12.8□□□□□ -0.36
LINC02396-201ENST00000546911 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
LINC02396-201ENST00000546911 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
LINC02396-201ENST00000546911 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
LINC02396-201ENST00000546911 CNBD1Q8NA66 436 aa12.79□□□□□ -0.36
LINC02396-201ENST00000546911 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms