RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TMEM229AB2RXF0 380 aa9.99□□□□□ -0.81
CCDC38-204ENST00000546816 EPXP11678 715 aa9.99□□□□□ -0.81
CCDC38-204ENST00000546816 MTFR1Q15390 333 aa9.99□□□□□ -0.81
CCDC38-204ENST00000546816 BTBD6Q96KE9 485 aa9.99□□□□□ -0.81
CCDC38-204ENST00000546816 SUV39H2Q9H5I1 410 aa9.99□□□□□ -0.81
CCDC38-204ENST00000546816 IQSEC3Q9UPP2 1182 aaPredicted RBP9.99□□□□□ -0.81
CCDC38-204ENST00000546816 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
CCDC38-204ENST00000546816 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
CCDC38-204ENST00000546816 ATXN7O15265 892 aaPredicted RBP9.97□□□□□ -0.81
CCDC38-204ENST00000546816 SOX11P35716 441 aa9.97□□□□□ -0.81
CCDC38-204ENST00000546816 AIDAQ96BJ3 306 aa9.97□□□□□ -0.81
CCDC38-204ENST00000546816 USP3Q9Y6I4 520 aa9.97□□□□□ -0.81
CCDC38-204ENST00000546816 A0A1W2PNR3 127 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 AMPD1P23109 780 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 BAG6P46379 1132 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 DGKGP49619 791 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 TNP2Q05952 138 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 FAM182BQ5T319 152 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 SERTAD1Q9UHV2 236 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 KLF15Q9UIH9 416 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 PCDHGA11Q9Y5H2 935 aa9.96□□□□□ -0.82
CCDC38-204ENST00000546816 A6NJY4 79 aa9.95□□□□□ -0.82
CCDC38-204ENST00000546816 NEURL1BA8MQ27 555 aa9.95□□□□□ -0.82
CCDC38-204ENST00000546816 GNB5O14775 395 aa9.95□□□□□ -0.82
CCDC38-204ENST00000546816 MAPTP10636 758 aaKnown RBP9.95□□□□□ -0.82
CCDC38-204ENST00000546816 MCM6Q14566 821 aa9.94□□□□□ -0.82
CCDC38-204ENST00000546816 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
CCDC38-204ENST00000546816 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
CCDC38-204ENST00000546816 ZDHHC3Q9NYG2 299 aa9.94□□□□□ -0.82
CCDC38-204ENST00000546816 DCDC2BA2VCK2 349 aa9.93□□□□□ -0.82
CCDC38-204ENST00000546816 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
CCDC38-204ENST00000546816 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
CCDC38-204ENST00000546816 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
CCDC38-204ENST00000546816 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-204ENST00000546816 PIK3R2O00459 728 aa9.92□□□□□ -0.82
CCDC38-204ENST00000546816 CD33P20138 364 aa9.92□□□□□ -0.82
CCDC38-204ENST00000546816 ARSJQ5FYB0 599 aaPredicted RBP9.92□□□□□ -0.82
CCDC38-204ENST00000546816 FAM157BP0CG42 384 aa9.91□□□□□ -0.82
CCDC38-204ENST00000546816 ADH6P28332 368 aa9.91□□□□□ -0.82
CCDC38-204ENST00000546816 CHSY3Q70JA7 882 aa9.91□□□□□ -0.82
CCDC38-204ENST00000546816 FCHSD1Q86WN1 690 aa9.91□□□□□ -0.82
CCDC38-204ENST00000546816 KHNYNO15037 678 aaKnown RBP9.9□□□□□ -0.82
CCDC38-204ENST00000546816 TATP17735 454 aaPredicted RBP9.9□□□□□ -0.82
CCDC38-204ENST00000546816 XP32Q5T750 250 aa9.9□□□□□ -0.82
CCDC38-204ENST00000546816 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
CCDC38-204ENST00000546816 CABP1Q9NZU7 370 aa9.9□□□□□ -0.82
CCDC38-204ENST00000546816 ALG2Q9H553 416 aa9.89□□□□□ -0.83
CCDC38-204ENST00000546816 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
CCDC38-204ENST00000546816 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
CCDC38-204ENST00000546816 FURINP09958 794 aa9.88□□□□□ -0.83
CCDC38-204ENST00000546816 EML3Q32P44 896 aa9.88□□□□□ -0.83
CCDC38-204ENST00000546816 CD163Q86VB7 1156 aa9.88□□□□□ -0.83
CCDC38-204ENST00000546816 STRN4Q9NRL3 753 aa9.88□□□□□ -0.83
CCDC38-204ENST00000546816 BACH1O14867 736 aa9.87□□□□□ -0.83
CCDC38-204ENST00000546816 EFSO43281 561 aa9.87□□□□□ -0.83
CCDC38-204ENST00000546816 LZTS3O60299 673 aaPredicted RBP9.87□□□□□ -0.83
CCDC38-204ENST00000546816 ZNF468Q5VIY5 522 aaPredicted RBP9.87□□□□□ -0.83
CCDC38-204ENST00000546816 NFATC2IPQ8NCF5 419 aa9.87□□□□□ -0.83
CCDC38-204ENST00000546816 ZDHHC1Q8WTX9 485 aa9.87□□□□□ -0.83
CCDC38-204ENST00000546816 NOP53Q9NZM5 478 aaKnown RBP9.87□□□□□ -0.83
CCDC38-204ENST00000546816 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
CCDC38-204ENST00000546816 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
CCDC38-204ENST00000546816 PARP3Q9Y6F1 533 aa9.87□□□□□ -0.83
CCDC38-204ENST00000546816 SKIP12755 728 aa9.86□□□□□ -0.83
CCDC38-204ENST00000546816 TXLNAP40222 546 aa9.86□□□□□ -0.83
CCDC38-204ENST00000546816 PCBP4P57723 403 aaKnown RBP9.86□□□□□ -0.83
CCDC38-204ENST00000546816 GTF2IP78347 998 aa9.86□□□□□ -0.83
CCDC38-204ENST00000546816 LAMC2Q13753 1193 aa9.86□□□□□ -0.83
CCDC38-204ENST00000546816 ZNF358Q9NW07 568 aa9.86□□□□□ -0.83
CCDC38-204ENST00000546816 CHRNA4P43681 627 aa9.85□□□□□ -0.83
CCDC38-204ENST00000546816 EPHA4P54764 986 aa9.85□□□□□ -0.83
CCDC38-204ENST00000546816 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC38-204ENST00000546816 MARK1Q9P0L2 795 aa9.85□□□□□ -0.83
CCDC38-204ENST00000546816 GJA3Q9Y6H8 435 aa9.85□□□□□ -0.83
CCDC38-204ENST00000546816 TEAD4Q15561 434 aa9.84□□□□□ -0.83
CCDC38-204ENST00000546816 C7orf43Q8WVR3 580 aa9.84□□□□□ -0.83
CCDC38-204ENST00000546816 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
CCDC38-204ENST00000546816 MDFIQ99750 246 aa9.84□□□□□ -0.83
CCDC38-204ENST00000546816 EML1O00423 815 aa9.83□□□□□ -0.84
CCDC38-204ENST00000546816 NCOA4Q13772 614 aa9.83□□□□□ -0.84
CCDC38-204ENST00000546816 BICDL1Q6ZP65 573 aa9.83□□□□□ -0.84
CCDC38-204ENST00000546816 L3MBTL2Q969R5 705 aa9.83□□□□□ -0.84
CCDC38-204ENST00000546816 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
CCDC38-204ENST00000546816 NOS2P35228 1153 aa9.81□□□□□ -0.84
CCDC38-204ENST00000546816 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-204ENST00000546816 ELOA3DA6NLF2 546 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-204ENST00000546816 ELOA3BQ3SY89 546 aa9.8□□□□□ -0.84
CCDC38-204ENST00000546816 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
CCDC38-204ENST00000546816 ELOA3Q8NG57 546 aa9.8□□□□□ -0.84
CCDC38-204ENST00000546816 GPC6Q9Y625 555 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-204ENST00000546816 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
CCDC38-204ENST00000546816 PSME1Q06323 249 aa9.79□□□□□ -0.84
CCDC38-204ENST00000546816 LRRC69Q6ZNQ3 347 aa9.79□□□□□ -0.84
CCDC38-204ENST00000546816 SYT9Q86SS6 491 aa9.79□□□□□ -0.84
CCDC38-204ENST00000546816 TNS4Q8IZW8 715 aa9.79□□□□□ -0.84
CCDC38-204ENST00000546816 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
CCDC38-204ENST00000546816 TBCELQ5QJ74 424 aa9.78□□□□□ -0.84
CCDC38-204ENST00000546816 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
CCDC38-204ENST00000546816 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms