RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 LMNB1P20700 586 aa17.94■□□□□ 0.46
RAB5B-203ENST00000546810 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
RAB5B-203ENST00000546810 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
RAB5B-203ENST00000546810 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
RAB5B-203ENST00000546810 POLRMTO00411 1230 aaKnown RBP17.92■□□□□ 0.46
RAB5B-203ENST00000546810 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
RAB5B-203ENST00000546810 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
RAB5B-203ENST00000546810 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
RAB5B-203ENST00000546810 ANP32CO43423 234 aa17.9■□□□□ 0.46
RAB5B-203ENST00000546810 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
RAB5B-203ENST00000546810 TM4SF1P30408 202 aa17.9■□□□□ 0.46
RAB5B-203ENST00000546810 PRKRIP1Q9H875 184 aaPredicted RBP17.9■□□□□ 0.46
RAB5B-203ENST00000546810 CREBZFQ9NS37 354 aa17.9■□□□□ 0.46
RAB5B-203ENST00000546810 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
RAB5B-203ENST00000546810 POTECB2RU33 542 aa17.89■□□□□ 0.45
RAB5B-203ENST00000546810 FOXN1O15353 648 aa17.89■□□□□ 0.45
RAB5B-203ENST00000546810 PRDM10Q9NQV6 1147 aa17.89■□□□□ 0.45
RAB5B-203ENST00000546810 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
RAB5B-203ENST00000546810 MYH14Q7Z406 1995 aaKnown RBP17.88■□□□□ 0.45
RAB5B-203ENST00000546810 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
RAB5B-203ENST00000546810 IL13P35225 146 aa17.88■□□□□ 0.45
RAB5B-203ENST00000546810 CABP4P57796 275 aa17.88■□□□□ 0.45
RAB5B-203ENST00000546810 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
RAB5B-203ENST00000546810 TTLL6Q8N841 843 aa17.86■□□□□ 0.45
RAB5B-203ENST00000546810 ZPR1O75312 459 aa17.85■□□□□ 0.45
RAB5B-203ENST00000546810 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
RAB5B-203ENST00000546810 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
RAB5B-203ENST00000546810 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
RAB5B-203ENST00000546810 NFKBIEO00221 500 aa17.84■□□□□ 0.45
RAB5B-203ENST00000546810 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
RAB5B-203ENST00000546810 CTCFP49711 727 aaPredicted RBP17.84■□□□□ 0.45
RAB5B-203ENST00000546810 AIDAQ96BJ3 306 aa17.84■□□□□ 0.45
RAB5B-203ENST00000546810 CNTNAP1P78357 1384 aa17.83■□□□□ 0.45
RAB5B-203ENST00000546810 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.44
RAB5B-203ENST00000546810 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.44
RAB5B-203ENST00000546810 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.44
RAB5B-203ENST00000546810 NFIXQ14938 502 aa17.82■□□□□ 0.44
RAB5B-203ENST00000546810 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
RAB5B-203ENST00000546810 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
RAB5B-203ENST00000546810 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
RAB5B-203ENST00000546810 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
RAB5B-203ENST00000546810 SERPINB2P05120 415 aa17.8■□□□□ 0.44
RAB5B-203ENST00000546810 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
RAB5B-203ENST00000546810 AMOTQ4VCS5 1084 aa17.8■□□□□ 0.44
RAB5B-203ENST00000546810 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
RAB5B-203ENST00000546810 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
RAB5B-203ENST00000546810 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
RAB5B-203ENST00000546810 H0YIN7 160 aa17.79■□□□□ 0.44
RAB5B-203ENST00000546810 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
RAB5B-203ENST00000546810 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
RAB5B-203ENST00000546810 TJP1Q07157 1748 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 HMOX1P09601 288 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
RAB5B-203ENST00000546810 LBX1P52954 281 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
RAB5B-203ENST00000546810 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 NARFQ9UHQ1 456 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 DLEC1Q9Y238 1755 aa17.78■□□□□ 0.44
RAB5B-203ENST00000546810 VEGFBP49765 207 aa17.77■□□□□ 0.44
RAB5B-203ENST00000546810 C1orf141Q5JVX7 400 aa17.77■□□□□ 0.44
RAB5B-203ENST00000546810 ABHD8Q96I13 439 aa17.77■□□□□ 0.44
RAB5B-203ENST00000546810 PASKQ96RG2 1323 aa17.76■□□□□ 0.43
RAB5B-203ENST00000546810 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
RAB5B-203ENST00000546810 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
RAB5B-203ENST00000546810 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
RAB5B-203ENST00000546810 WBP1LQ9NX94 342 aa17.76■□□□□ 0.43
RAB5B-203ENST00000546810 CARMIL3Q8ND23 1372 aa17.76■□□□□ 0.43
RAB5B-203ENST00000546810 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
RAB5B-203ENST00000546810 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
RAB5B-203ENST00000546810 C21orf2O43822 256 aa17.75■□□□□ 0.43
RAB5B-203ENST00000546810 NEFMP07197 916 aa17.75■□□□□ 0.43
RAB5B-203ENST00000546810 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
RAB5B-203ENST00000546810 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
RAB5B-203ENST00000546810 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
RAB5B-203ENST00000546810 COL15A1P39059 1388 aa17.75■□□□□ 0.43
RAB5B-203ENST00000546810 TMEM88BA6NKF7 163 aa17.74■□□□□ 0.43
RAB5B-203ENST00000546810 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
RAB5B-203ENST00000546810 LDHDQ86WU2 507 aa17.74■□□□□ 0.43
RAB5B-203ENST00000546810 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB5B-203ENST00000546810 CYP19A1P11511 503 aaPredicted RBP17.73■□□□□ 0.43
RAB5B-203ENST00000546810 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
RAB5B-203ENST00000546810 HSPA8P11142 646 aaKnown RBP17.72■□□□□ 0.43
RAB5B-203ENST00000546810 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
RAB5B-203ENST00000546810 ZBTB1Q9Y2K1 713 aa17.72■□□□□ 0.43
RAB5B-203ENST00000546810 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
RAB5B-203ENST00000546810 PRKAR2BP31323 418 aa17.71■□□□□ 0.43
RAB5B-203ENST00000546810 BICDL1Q6ZP65 573 aa17.71■□□□□ 0.43
RAB5B-203ENST00000546810 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
RAB5B-203ENST00000546810 PDZRN3Q9UPQ7 1066 aa17.71■□□□□ 0.43
RAB5B-203ENST00000546810 PDE6BP35913 854 aa17.7■□□□□ 0.42
RAB5B-203ENST00000546810 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
RAB5B-203ENST00000546810 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
RAB5B-203ENST00000546810 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
RAB5B-203ENST00000546810 ITGBL1O95965 494 aaPredicted RBP17.69■□□□□ 0.42
RAB5B-203ENST00000546810 GAS2L2Q8NHY3 880 aa17.69■□□□□ 0.42
RAB5B-203ENST00000546810 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
RAB5B-203ENST00000546810 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
RAB5B-203ENST00000546810 L3MBTL3Q96JM7 780 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms