RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 A6NJY4 79 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 TMCO5BA8MYB1 307 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 STK25O00506 426 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 PPFIA3O75145 1194 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 BBOX1O75936 387 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 MSL3P1P0C860 447 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 RBP3P10745 1247 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 ATP2B1P20020 1258 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 STIP1P31948 543 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 TRAPPC10P48553 1259 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 SH3BGRP55822 239 aaPredicted RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 SESN3P58005 492 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 CCT2P78371 535 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 EIF2B5Q13144 721 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 BRD3Q15059 726 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 TAF11Q15544 211 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 SEPT7Q16181 437 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 ENOX2Q16206 610 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 DDB1Q16531 1140 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 AMHR2Q16671 573 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 FAM161AQ3B820 660 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 SH3D19Q5HYK7 790 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 RC3H1Q5TC82 1133 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 MFSD4BQ5TF39 518 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 ZNF746Q6NUN9 644 aaPredicted RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 PDXDC1Q6P996 788 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 DAAM2Q86T65 1068 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 JAZF1Q86VZ6 243 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 PARP9Q8IXQ6 854 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 CHPFQ8IZ52 775 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 SAMD14Q8IZD0 417 aaPredicted RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 STK11IPQ8N1F8 1099 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 STAG2Q8N3U4 1231 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 SLC43A3Q8NBI5 491 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 NGDNQ8NEJ9 315 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 TBC1D22AQ8WUA7 517 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 HDAC7Q8WUI4 952 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 C17orf50Q8WW18 174 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 ATRIPQ8WXE1 791 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 GLMNQ92990 594 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 ERP27Q96DN0 273 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 PAWRQ96IZ0 340 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 MPHOSPH6Q99547 160 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 APBA2Q99767 749 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 DHX36Q9H2U1 1008 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 PIF1Q9H611 641 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 TRPV5Q9NQA5 729 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 IFT57Q9NWB7 429 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 DCAF16Q9NXF7 216 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 PCSK1NQ9UHG2 260 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 USP25Q9UHP3 1055 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 XPO7Q9UIA9 1087 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 FBXO2Q9UK22 296 aaPredicted RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 ZHX1Q9UKY1 873 aaPredicted RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 DIS3Q9Y2L1 958 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 KIF3AQ9Y496 699 aa2.35□□□□□ -2.03
CFTR-207ENST00000546407 DDX49Q9Y6V7 483 aaKnown RBP2.35□□□□□ -2.03
CFTR-207ENST00000546407 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 SHTN1A0MZ66 631 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 FAM170AA1A519 330 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TMEM88BA6NKF7 163 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ESPNB1AK53 854 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 SCAMP3O14828 347 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 CAND2O75155 1236 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 E2F6O75461 281 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TCEA3O75764 348 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 PDGFRBP09619 1106 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 U2AF1L5P0DN76 240 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 HSPA5P11021 654 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 SKILP12757 684 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 VCAM1P19320 739 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 GUCY2CP25092 1073 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 HOXD10P28358 340 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZNF76P36508 570 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 GNALP38405 381 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TSPAN7P41732 249 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 USP5P45974 858 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 U2AF1Q01081 240 aaKnown RBP eCLIP2.34□□□□□ -2.03
CFTR-207ENST00000546407 COX10Q12887 443 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TRAF1Q13077 416 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 SIM2Q14190 667 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 HLTFQ14527 1009 aaKnown RBP eCLIP2.34□□□□□ -2.03
CFTR-207ENST00000546407 KRT72Q14CN4 511 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZSCAN26Q16670 478 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 LONRF1Q17RB8 773 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 MAP9Q49MG5 647 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 CCDC93Q567U6 631 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 NOM1Q5C9Z4 860 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 ODR4Q5SWX8 454 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 JAKMIP3Q5VZ66 844 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 CPLX2Q6PUV4 134 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 CADPS2Q86UW7 1296 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TAX1BP1Q86VP1 789 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TTC30AQ86WT1 665 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 RELL1Q8IUW5 271 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 MIER1Q8N108 512 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 STAG1Q8WVM7 1258 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZFPM2Q8WW38 1151 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 DHX38Q92620 1227 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms