RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CABP4P57796 275 aa14.3□□□□□ -0.12
NPC1L1-204ENST00000546276 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
NPC1L1-204ENST00000546276 GSDMDP57764 484 aa14.3□□□□□ -0.12
NPC1L1-204ENST00000546276 USP48Q86UV5 1035 aa14.3□□□□□ -0.12
NPC1L1-204ENST00000546276 BLMP54132 1417 aaPredicted RBP14.3□□□□□ -0.12
NPC1L1-204ENST00000546276 STIM1Q13586 685 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 CCDC8Q9H0W5 538 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 STX1AQ16623 288 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 LARP1Q6PKG0 1096 aaKnown RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 DCTPP1Q9H773 170 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 TRMT1Q9NXH9 659 aaKnown RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 URI1O94763 535 aaPredicted RBP14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 WASF1Q92558 559 aa14.29□□□□□ -0.12
NPC1L1-204ENST00000546276 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 ARHGAP29Q52LW3 1261 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 PPP1R42Q7Z4L9 355 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 CNPY2Q9Y2B0 182 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 C16orf71Q8IYS4 520 aaPredicted RBP14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 FSIP1Q8NA03 581 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 C8orf76Q96K31 380 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 PAXBP1Q9Y5B6 917 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 ATP10BO94823 1461 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 EPB41L2O43491 1005 aaKnown RBP14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 WDR62O43379 1518 aa14.28□□□□□ -0.12
NPC1L1-204ENST00000546276 THEMISQ8N1K5 641 aaPredicted RBP14.27□□□□□ -0.12
NPC1L1-204ENST00000546276 C8orf58Q8NAV2 365 aa14.27□□□□□ -0.12
NPC1L1-204ENST00000546276 MTMR7Q9Y216 660 aa14.27□□□□□ -0.12
NPC1L1-204ENST00000546276 SHANK2Q9UPX8 1470 aa14.27□□□□□ -0.12
NPC1L1-204ENST00000546276 DNMT1P26358 1616 aaKnown RBP14.27□□□□□ -0.12
NPC1L1-204ENST00000546276 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.13
NPC1L1-204ENST00000546276 RDXP35241 583 aaKnown RBP14.27□□□□□ -0.13
NPC1L1-204ENST00000546276 CCDC102AQ96A19 550 aa14.27□□□□□ -0.13
NPC1L1-204ENST00000546276 TRIM34Q9BYJ4 488 aa14.27□□□□□ -0.13
NPC1L1-204ENST00000546276 TSPYL1Q9H0U9 437 aa14.27□□□□□ -0.13
NPC1L1-204ENST00000546276 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.13
NPC1L1-204ENST00000546276 GBP3Q9H0R5 595 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 ZHX1Q9UKY1 873 aaPredicted RBP14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 PIK3R4Q99570 1358 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 VAMP4O75379 141 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 GUCY1B3Q02153 619 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 PLEKHM2Q8IWE5 1019 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 FAM200AQ8TCP9 573 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 CDK5RAP3Q96JB5 506 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 MYO6Q9UM54 1294 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 CCDC181Q5TID7 509 aa14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
NPC1L1-204ENST00000546276 CEP135Q66GS9 1140 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 IQCEQ6IPM2 695 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 CALCOCO1Q9P1Z2 691 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 SYCP2Q9BX26 1530 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 CASQ1P31415 396 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 F13A1P00488 732 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 FBLN1P23142 703 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 TXLNBQ8N3L3 684 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 USP26Q9BXU7 913 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 TTC12Q9H892 705 aaPredicted RBP14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
NPC1L1-204ENST00000546276 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 UBAC1Q9BSL1 405 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 FAM177BA6PVY3 158 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 KIAA0754O94854 1291 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 SNW1Q13573 536 aaKnown RBP14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 PODXL2Q9NZ53 605 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 CCDC171Q6TFL3 1326 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 TMC6Q7Z403 805 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 TCEAL9Q9UHQ7 104 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 CEP85Q6P2H3 762 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 FANCAO15360 1455 aa14.24□□□□□ -0.13
NPC1L1-204ENST00000546276 TDO2P48775 406 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 MYD88Q99836 296 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 KIF5CO60282 957 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 IFIT1P09914 478 aaKnown RBP14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 CCDC186Q7Z3E2 898 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 TSPYL6Q8N831 410 aa14.23□□□□□ -0.13
NPC1L1-204ENST00000546276 ZSCAN16Q9H4T2 348 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms