RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 ZKSCAN1P17029 563 aaPredicted RBP12.1□□□□□ -0.47
SOD2-216ENST00000546260 LRRC8AQ8IWT6 810 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 ZNF853P0CG23 659 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
SOD2-216ENST00000546260 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
SOD2-216ENST00000546260 EXOC6BQ9Y2D4 811 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
SOD2-216ENST00000546260 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 SHTN1A0MZ66 631 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
SOD2-216ENST00000546260 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
SOD2-216ENST00000546260 PDCP20941 246 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 DNAJC21Q5F1R6 531 aaKnown RBP12.09□□□□□ -0.47
SOD2-216ENST00000546260 LRRCC1Q9C099 1032 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 ADAM21Q9UKJ8 722 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 DENND4BO75064 1496 aaPredicted RBP12.09□□□□□ -0.47
SOD2-216ENST00000546260 LIMCH1Q9UPQ0 1083 aa12.09□□□□□ -0.47
SOD2-216ENST00000546260 RAD50Q92878 1312 aa12.08□□□□□ -0.47
SOD2-216ENST00000546260 BRPF1P55201 1214 aaPredicted RBP12.08□□□□□ -0.48
SOD2-216ENST00000546260 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
SOD2-216ENST00000546260 RNF187Q5TA31 235 aaPredicted RBP12.08□□□□□ -0.48
SOD2-216ENST00000546260 PLCD4Q9BRC7 762 aa12.08□□□□□ -0.48
SOD2-216ENST00000546260 KDM5CP41229 1560 aa12.08□□□□□ -0.48
SOD2-216ENST00000546260 MMS22LQ6ZRQ5 1243 aa12.08□□□□□ -0.48
SOD2-216ENST00000546260 JAKMIP1Q96N16 626 aaKnown RBP12.08□□□□□ -0.48
SOD2-216ENST00000546260 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
SOD2-216ENST00000546260 HMOX1P09601 288 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 NOP2P46087 812 aaKnown RBP12.07□□□□□ -0.48
SOD2-216ENST00000546260 RUFY1Q96T51 708 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 EBAG9O00559 213 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 SATB1Q01826 763 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 AOPEPQ8N6M6 819 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
SOD2-216ENST00000546260 CFAP100Q494V2 611 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 ZSCAN12O43309 604 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 PPP2R3AQ06190 1150 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 ANO10Q9NW15 660 aa12.07□□□□□ -0.48
SOD2-216ENST00000546260 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
SOD2-216ENST00000546260 ME1P48163 572 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
SOD2-216ENST00000546260 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
SOD2-216ENST00000546260 KIF1BPQ96EK5 621 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 GGNBP2Q9H3C7 697 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 PLA2G4AP47712 749 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 STX1AQ16623 288 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 CCDC30Q5VVM6 783 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 PDE11AQ9HCR9 933 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 BIN1O00499 593 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 EXOC4Q96A65 974 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 JPH2Q9BR39 696 aaPredicted RBP12.06□□□□□ -0.48
SOD2-216ENST00000546260 CYP46A1Q9Y6A2 500 aa12.06□□□□□ -0.48
SOD2-216ENST00000546260 AP5Z1O43299 807 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 CCDC144BQ3MJ40 725 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 CCDC144CPQ8IYA2 1237 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 GOLGA1Q92805 767 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 ESYT1Q9BSJ8 1104 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
SOD2-216ENST00000546260 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
SOD2-216ENST00000546260 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 CCDC150Q8NCX0 1101 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 CRACR2AQ9BSW2 395 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 RBM28Q9NW13 759 aaKnown RBP12.05□□□□□ -0.48
SOD2-216ENST00000546260 PALD1Q9ULE6 856 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 KIF14Q15058 1648 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
SOD2-216ENST00000546260 RHOXF2BP0C7M4 288 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 RHOXF2Q9BQY4 288 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 CPA1P15085 419 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
SOD2-216ENST00000546260 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
SOD2-216ENST00000546260 GBP2P32456 591 aaPredicted RBP12.04□□□□□ -0.48
SOD2-216ENST00000546260 ALDH1L2Q3SY69 923 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
SOD2-216ENST00000546260 IL1RAPL2Q9NP60 686 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 COL17A1Q9UMD9 1497 aaPredicted RBP12.04□□□□□ -0.48
SOD2-216ENST00000546260 GNAI1P63096 354 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 PACS2Q86VP3 889 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 GBP3Q9H0R5 595 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 CCDC141Q6ZP82 1450 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 INPP5BP32019 993 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 HDXQ7Z353 690 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 RPAP2Q8IXW5 612 aaPredicted RBP12.04□□□□□ -0.48
SOD2-216ENST00000546260 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms