RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 CABLES1Q8TDN4 633 aa5.94□□□□□ -1.46
MDM1-215ENST00000545964 GJD4Q96KN9 370 aaPredicted RBP5.94□□□□□ -1.46
MDM1-215ENST00000545964 PRDM9Q9NQV7 894 aa5.94□□□□□ -1.46
MDM1-215ENST00000545964 CCDC9Q9Y3X0 531 aaKnown RBP5.94□□□□□ -1.46
MDM1-215ENST00000545964 DNMT3AQ9Y6K1 912 aaPredicted RBP5.94□□□□□ -1.46
MDM1-215ENST00000545964 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 CLTCL1P53675 1640 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 NRXN3Q9Y4C0 1643 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 PLEKHG3A1L390 1219 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 DDX11L8A8MPP1 907 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 DXOO77932 396 aaKnown RBP5.93□□□□□ -1.46
MDM1-215ENST00000545964 VEGFBP49765 207 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 HIC1Q14526 733 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 CFAP70Q5T0N1 1121 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 UNC5CLQ8IV45 518 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 USB1Q9BQ65 265 aaKnown RBP5.93□□□□□ -1.46
MDM1-215ENST00000545964 POGKQ9P215 609 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 SHPRHQ149N8 1683 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 NEXMIFQ5QGS0 1516 aa5.93□□□□□ -1.46
MDM1-215ENST00000545964 LRPPRCP42704 1394 aaKnown RBP5.93□□□□□ -1.46
MDM1-215ENST00000545964 HFM1A2PYH4 1435 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 RGS12O14924 1447 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 RRBP1Q9P2E9 1410 aaKnown RBP5.92□□□□□ -1.46
MDM1-215ENST00000545964 CDK12Q9NYV4 1490 aaPredicted RBP5.92□□□□□ -1.46
MDM1-215ENST00000545964 SPHKAPQ2M3C7 1700 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 XRN1Q8IZH2 1706 aaKnown RBP5.92□□□□□ -1.46
MDM1-215ENST00000545964 TESPA1A2RU30 521 aaPredicted RBP5.92□□□□□ -1.46
MDM1-215ENST00000545964 KANK3Q6NY19 840 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 CCDC125Q86Z20 511 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 CCDC24Q8N4L8 307 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 EHBP1Q8NDI1 1231 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 PMFBP1Q8TBY8 1022 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 C14orf93Q9H972 538 aaKnown RBP5.92□□□□□ -1.46
MDM1-215ENST00000545964 PLEKHH1Q9ULM0 1364 aa5.92□□□□□ -1.46
MDM1-215ENST00000545964 CCDC144AA2RUR9 1427 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 BMP1P13497 986 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 GSK3AP49840 483 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 SF3B2Q13435 895 aaKnown RBP5.91□□□□□ -1.46
MDM1-215ENST00000545964 FAM161AQ3B820 660 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 SEPT12Q8IYM1 358 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 SIRT1Q96EB6 747 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 ZFP42Q96MM3 310 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 PRAM1Q96QH2 718 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 HIRIP3Q9BW71 556 aaPredicted RBP5.91□□□□□ -1.46
MDM1-215ENST00000545964 TRAK1Q9UPV9 953 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 SPATA31A3Q5VYP0 1347 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
MDM1-215ENST00000545964 ABCC11Q96J66 1382 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 ANKRD30BQ9BXX2 1392 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 PTCH1Q13635 1447 aa5.91□□□□□ -1.46
MDM1-215ENST00000545964 KIF1BO60333 1816 aa5.9□□□□□ -1.46
MDM1-215ENST00000545964 FAM83GA6ND36 823 aa5.9□□□□□ -1.46
MDM1-215ENST00000545964 RNF19BQ6ZMZ0 732 aa5.9□□□□□ -1.46
MDM1-215ENST00000545964 DEFB132Q7Z7B7 95 aa5.9□□□□□ -1.46
MDM1-215ENST00000545964 ATRNO75882 1429 aa5.9□□□□□ -1.47
MDM1-215ENST00000545964 BCL9LQ86UU0 1499 aa5.9□□□□□ -1.47
MDM1-215ENST00000545964 NHSL1Q5SYE7 1610 aa5.89□□□□□ -1.47
MDM1-215ENST00000545964 NALCNQ8IZF0 1738 aa5.89□□□□□ -1.47
MDM1-215ENST00000545964 RBM26Q5T8P6 1007 aaKnown RBP5.89□□□□□ -1.47
MDM1-215ENST00000545964 MRPL14Q6P1L8 145 aaKnown RBP5.89□□□□□ -1.47
MDM1-215ENST00000545964 KRT27Q7Z3Y8 459 aa5.89□□□□□ -1.47
MDM1-215ENST00000545964 NGDNQ8NEJ9 315 aaKnown RBP5.89□□□□□ -1.47
MDM1-215ENST00000545964 DCAF11Q8TEB1 546 aa5.89□□□□□ -1.47
MDM1-215ENST00000545964 MINK1Q8N4C8 1332 aaPredicted RBP5.89□□□□□ -1.47
MDM1-215ENST00000545964 YTHDC2Q9H6S0 1430 aaKnown RBP5.89□□□□□ -1.47
MDM1-215ENST00000545964 SIAH2O43255 324 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 SKOR1P84550 965 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 VPS72Q15906 364 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 SMYD5Q6GMV2 418 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 MPNDQ8N594 471 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 BTG4Q9NY30 223 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 ADAMTS8Q9UP79 889 aa5.88□□□□□ -1.47
MDM1-215ENST00000545964 USP46P62068 366 aa5.87□□□□□ -1.47
MDM1-215ENST00000545964 FAM182BQ5T319 152 aa5.87□□□□□ -1.47
MDM1-215ENST00000545964 NUTM2GQ5VZR2 741 aa5.87□□□□□ -1.47
MDM1-215ENST00000545964 SPATA31E1Q6ZUB1 1445 aa5.87□□□□□ -1.47
MDM1-215ENST00000545964 PXDNQ92626 1479 aa5.87□□□□□ -1.47
MDM1-215ENST00000545964 MYOM2P54296 1465 aa5.86□□□□□ -1.47
MDM1-215ENST00000545964 RALGAPBQ86X10 1494 aa5.86□□□□□ -1.47
MDM1-215ENST00000545964 ACIN1Q9UKV3 1341 aaKnown RBP5.86□□□□□ -1.47
MDM1-215ENST00000545964 WASLO00401 505 aaPredicted RBP5.86□□□□□ -1.47
MDM1-215ENST00000545964 EVA1CP58658 441 aa5.86□□□□□ -1.47
MDM1-215ENST00000545964 GPAT2Q6NUI2 795 aa5.86□□□□□ -1.47
MDM1-215ENST00000545964 SCARF2Q96GP6 870 aaPredicted RBP5.86□□□□□ -1.47
MDM1-215ENST00000545964 GPRASP1Q5JY77 1395 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 MAN1A2O60476 641 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 BAG6P46379 1132 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 ZC3H6P61129 1189 aaKnown RBP5.85□□□□□ -1.47
MDM1-215ENST00000545964 CHRNA2Q15822 529 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 XP32Q5T750 250 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 NUDT16Q96DE0 195 aaKnown RBP5.85□□□□□ -1.47
MDM1-215ENST00000545964 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 STRN4Q9NRL3 753 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
MDM1-215ENST00000545964 TECPR2O15040 1411 aa5.84□□□□□ -1.47
MDM1-215ENST00000545964 PIK3C2GO75747 1445 aa5.84□□□□□ -1.47
MDM1-215ENST00000545964 BLMP54132 1417 aaPredicted RBP5.84□□□□□ -1.47
MDM1-215ENST00000545964 SBNO1A3KN83 1393 aa5.84□□□□□ -1.47
MDM1-215ENST00000545964 ARHGEF10O15013 1369 aa5.84□□□□□ -1.47
MDM1-215ENST00000545964 UPP2O95045 317 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms