RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
DDB1-225ENST00000545930 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
DDB1-225ENST00000545930 ZCRB1Q8TBF4 217 aaKnown RBP12.72□□□□□ -0.37
DDB1-225ENST00000545930 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
DDB1-225ENST00000545930 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
DDB1-225ENST00000545930 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
DDB1-225ENST00000545930 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.37
DDB1-225ENST00000545930 PHACTR3Q96KR7 559 aa12.71□□□□□ -0.37
DDB1-225ENST00000545930 GNAT3A8MTJ3 354 aa12.7□□□□□ -0.38
DDB1-225ENST00000545930 LSM11P83369 360 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDB1-225ENST00000545930 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
DDB1-225ENST00000545930 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
DDB1-225ENST00000545930 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
DDB1-225ENST00000545930 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 FOXK1P85037 733 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 DDB1Q16531 1140 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
DDB1-225ENST00000545930 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
DDB1-225ENST00000545930 ATRNO75882 1429 aa12.69□□□□□ -0.38
DDB1-225ENST00000545930 RBM6P78332 1123 aaKnown RBP12.68□□□□□ -0.38
DDB1-225ENST00000545930 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
DDB1-225ENST00000545930 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
DDB1-225ENST00000545930 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
DDB1-225ENST00000545930 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
DDB1-225ENST00000545930 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
DDB1-225ENST00000545930 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
DDB1-225ENST00000545930 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
DDB1-225ENST00000545930 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
DDB1-225ENST00000545930 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
DDB1-225ENST00000545930 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
DDB1-225ENST00000545930 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
DDB1-225ENST00000545930 DISP2A7MBM2 1401 aa12.66□□□□□ -0.38
DDB1-225ENST00000545930 A0A0G2JS52 829 aa12.66□□□□□ -0.38
DDB1-225ENST00000545930 PHKG2P15735 406 aa12.66□□□□□ -0.38
DDB1-225ENST00000545930 RXRBP28702 533 aa12.66□□□□□ -0.38
DDB1-225ENST00000545930 MYT1Q01538 1121 aa12.66□□□□□ -0.38
DDB1-225ENST00000545930 MEGF6O75095 1541 aa12.66□□□□□ -0.38
DDB1-225ENST00000545930 IL16Q14005 1332 aa12.65□□□□□ -0.38
DDB1-225ENST00000545930 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
DDB1-225ENST00000545930 DCAF5Q96JK2 942 aa12.65□□□□□ -0.38
DDB1-225ENST00000545930 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
DDB1-225ENST00000545930 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
DDB1-225ENST00000545930 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
DDB1-225ENST00000545930 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
DDB1-225ENST00000545930 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
DDB1-225ENST00000545930 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
DDB1-225ENST00000545930 TBC1D12O60347 775 aa12.63□□□□□ -0.39
DDB1-225ENST00000545930 GNAI1P63096 354 aa12.63□□□□□ -0.39
DDB1-225ENST00000545930 TEFQ10587 303 aa12.63□□□□□ -0.39
DDB1-225ENST00000545930 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
DDB1-225ENST00000545930 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 E9PSI1 815 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 CYP27B1O15528 508 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
DDB1-225ENST00000545930 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
DDB1-225ENST00000545930 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
DDB1-225ENST00000545930 MPRIPQ6WCQ1 1025 aa12.61□□□□□ -0.39
DDB1-225ENST00000545930 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
DDB1-225ENST00000545930 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
DDB1-225ENST00000545930 GLI3P10071 1580 aa12.6□□□□□ -0.39
DDB1-225ENST00000545930 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
DDB1-225ENST00000545930 CENPBP07199 599 aaPredicted RBP12.6□□□□□ -0.39
DDB1-225ENST00000545930 CABP4P57796 275 aa12.6□□□□□ -0.39
DDB1-225ENST00000545930 MCM10Q7L590 875 aa12.6□□□□□ -0.39
DDB1-225ENST00000545930 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
DDB1-225ENST00000545930 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
DDB1-225ENST00000545930 DCTN1Q14203 1278 aa12.59□□□□□ -0.39
DDB1-225ENST00000545930 SLC52A2Q9HAB3 445 aa12.59□□□□□ -0.39
DDB1-225ENST00000545930 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
DDB1-225ENST00000545930 CHL1O00533 1208 aa12.58□□□□□ -0.4
DDB1-225ENST00000545930 SLFN5Q08AF3 891 aa12.58□□□□□ -0.4
DDB1-225ENST00000545930 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
DDB1-225ENST00000545930 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.4
DDB1-225ENST00000545930 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
DDB1-225ENST00000545930 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
DDB1-225ENST00000545930 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
DDB1-225ENST00000545930 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
DDB1-225ENST00000545930 SCN11AQ9UI33 1791 aa12.57□□□□□ -0.4
DDB1-225ENST00000545930 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
DDB1-225ENST00000545930 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
DDB1-225ENST00000545930 POTEAQ6S8J7 498 aa12.57□□□□□ -0.4
DDB1-225ENST00000545930 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
DDB1-225ENST00000545930 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
DDB1-225ENST00000545930 VIRMAQ69YN4 1812 aaKnown RBP12.56□□□□□ -0.4
DDB1-225ENST00000545930 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
DDB1-225ENST00000545930 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
DDB1-225ENST00000545930 DSG2Q14126 1118 aa12.56□□□□□ -0.4
DDB1-225ENST00000545930 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
DDB1-225ENST00000545930 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
DDB1-225ENST00000545930 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
DDB1-225ENST00000545930 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
DDB1-225ENST00000545930 BCL9O00512 1426 aa12.55□□□□□ -0.4
DDB1-225ENST00000545930 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms