RNA–Protein interactions for RNA: ENST00000545484.1

CCND1-206, Transcript of cyclin D1, humanhuman

TSL 5

Gene CCND1, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-206ENST00000545484 PNNQ9H307 717 aaKnown RBP28.53■■■□□ 2.16
CCND1-206ENST00000545484 UTRNP46939 3433 aa28.53■■■□□ 2.16
CCND1-206ENST00000545484 COL15A1P39059 1388 aa28.52■■■□□ 2.16
CCND1-206ENST00000545484 KCNQ3O43525 872 aa28.52■■■□□ 2.16
CCND1-206ENST00000545484 CANXP27824 592 aaKnown RBP28.51■■■□□ 2.15
CCND1-206ENST00000545484 ZPR1O75312 459 aa28.5■■■□□ 2.15
CCND1-206ENST00000545484 YBX3P16989 372 aaKnown RBP eCLIP28.5■■■□□ 2.15
CCND1-206ENST00000545484 FKBP8Q14318 412 aa28.5■■■□□ 2.15
CCND1-206ENST00000545484 PARP3Q9Y6F1 533 aa28.5■■■□□ 2.15
CCND1-206ENST00000545484 TEX13AQ9BXU3 409 aaPredicted RBP28.49■■■□□ 2.15
CCND1-206ENST00000545484 NFE2L2Q16236 605 aa28.48■■■□□ 2.15
CCND1-206ENST00000545484 USPL1Q5W0Q7 1092 aa28.48■■■□□ 2.15
CCND1-206ENST00000545484 C10orf71Q711Q0 1435 aa28.47■■■□□ 2.15
CCND1-206ENST00000545484 N4BP2Q86UW6 1770 aaPredicted RBP28.47■■■□□ 2.15
CCND1-206ENST00000545484 KIAA1551Q9HCM1 1747 aa28.46■■■□□ 2.15
CCND1-206ENST00000545484 GOLGB1Q14789 3259 aaKnown RBP28.46■■■□□ 2.15
CCND1-206ENST00000545484 WWC3Q9ULE0 1092 aa28.46■■■□□ 2.15
CCND1-206ENST00000545484 NARFQ9UHQ1 456 aa28.45■■■□□ 2.14
CCND1-206ENST00000545484 TAF7Q15545 349 aaPredicted RBP28.44■■■□□ 2.14
CCND1-206ENST00000545484 PRKRIP1Q9H875 184 aaPredicted RBP28.44■■■□□ 2.14
CCND1-206ENST00000545484 ZNF330Q9Y3S2 320 aaPredicted RBP28.44■■■□□ 2.14
CCND1-206ENST00000545484 KDM3BQ7LBC6 1761 aa28.44■■■□□ 2.14
CCND1-206ENST00000545484 PXDNLA1KZ92 1463 aa28.43■■■□□ 2.14
CCND1-206ENST00000545484 GRIN3BO60391 1043 aa28.43■■■□□ 2.14
CCND1-206ENST00000545484 DDR1Q08345 913 aa28.43■■■□□ 2.14
CCND1-206ENST00000545484 EIF5P55010 431 aaKnown RBP28.42■■■□□ 2.14
CCND1-206ENST00000545484 THUMPD2Q9BTF0 503 aaKnown RBP28.42■■■□□ 2.14
CCND1-206ENST00000545484 SCN7AQ01118 1682 aa28.42■■■□□ 2.14
CCND1-206ENST00000545484 A1BGP04217 495 aa28.41■■■□□ 2.14
CCND1-206ENST00000545484 MIS18AQ9NYP9 233 aa28.41■■■□□ 2.14
CCND1-206ENST00000545484 PRAMEF22A3QJZ6 481 aa28.4■■■□□ 2.14
CCND1-206ENST00000545484 SNRPA1P09661 255 aaKnown RBP28.4■■■□□ 2.14
CCND1-206ENST00000545484 WDR43Q15061 677 aaKnown RBP eCLIP28.4■■■□□ 2.14
CCND1-206ENST00000545484 USP16Q9Y5T5 823 aa28.4■■■□□ 2.14
CCND1-206ENST00000545484 LAMB4A4D0S4 1761 aa28.39■■■□□ 2.14
CCND1-206ENST00000545484 AFDNP55196 1824 aaKnown RBP28.39■■■□□ 2.14
CCND1-206ENST00000545484 A0A087WZG4 1122 aa28.39■■■□□ 2.14
CCND1-206ENST00000545484 POLRMTO00411 1230 aaKnown RBP28.38■■■□□ 2.13
CCND1-206ENST00000545484 TM4SF1P30408 202 aa28.38■■■□□ 2.13
CCND1-206ENST00000545484 IL6STP40189 918 aaPredicted RBP28.38■■■□□ 2.13
CCND1-206ENST00000545484 TGFB2P61812 414 aa28.38■■■□□ 2.13
CCND1-206ENST00000545484 BCL2L12Q9HB09 334 aa28.38■■■□□ 2.13
CCND1-206ENST00000545484 NFIXQ14938 502 aa28.37■■■□□ 2.13
CCND1-206ENST00000545484 NPM2Q86SE8 214 aaKnown RBP28.37■■■□□ 2.13
CCND1-206ENST00000545484 CCDC146Q8IYE0 955 aa28.37■■■□□ 2.13
CCND1-206ENST00000545484 PNISRQ8TF01 805 aaKnown RBP28.37■■■□□ 2.13
CCND1-206ENST00000545484 BRCA1P38398 1863 aaKnown RBP28.36■■■□□ 2.13
CCND1-206ENST00000545484 A0A0G2JLW4 131 aa28.36■■■□□ 2.13
CCND1-206ENST00000545484 RIPK4P57078 832 aa28.36■■■□□ 2.13
CCND1-206ENST00000545484 BCORQ6W2J9 1755 aa28.35■■■□□ 2.13
CCND1-206ENST00000545484 PIP4K2AP48426 406 aaPredicted RBP28.35■■■□□ 2.13
CCND1-206ENST00000545484 NRXN2Q9P2S2 1712 aa28.35■■■□□ 2.13
CCND1-206ENST00000545484 TBC1D2BQ9UPU7 963 aa28.34■■■□□ 2.13
CCND1-206ENST00000545484 DPEP1P16444 411 aa28.33■■■□□ 2.13
CCND1-206ENST00000545484 TMPOP42166 694 aaKnown RBP28.33■■■□□ 2.13
CCND1-206ENST00000545484 ZNF784Q8NCA9 323 aaPredicted RBP28.33■■■□□ 2.13
CCND1-206ENST00000545484 BICDL1Q6ZP65 573 aa28.32■■■□□ 2.12
CCND1-206ENST00000545484 RRP7AQ9Y3A4 280 aaKnown RBP28.32■■■□□ 2.12
CCND1-206ENST00000545484 LMOD3Q0VAK6 560 aa28.31■■■□□ 2.12
CCND1-206ENST00000545484 RUNDC1Q96C34 613 aa28.3■■■□□ 2.12
CCND1-206ENST00000545484 ADAMTS8Q9UP79 889 aa28.3■■■□□ 2.12
CCND1-206ENST00000545484 NEUROD2Q15784 382 aa28.29■■■□□ 2.12
CCND1-206ENST00000545484 DZIP3Q86Y13 1208 aaKnown RBP28.29■■■□□ 2.12
CCND1-206ENST00000545484 BCS1LQ9Y276 419 aa28.29■■■□□ 2.12
CCND1-206ENST00000545484 ZNF316A6NFI3 1004 aaPredicted RBP28.28■■■□□ 2.12
CCND1-206ENST00000545484 SERPINB2P05120 415 aa28.28■■■□□ 2.12
CCND1-206ENST00000545484 EIF4A1P60842 406 aaKnown RBP28.28■■■□□ 2.12
CCND1-206ENST00000545484 TBC1D9BQ66K14 1250 aa28.28■■■□□ 2.12
CCND1-206ENST00000545484 CAMTA2O94983 1202 aa28.27■■■□□ 2.12
CCND1-206ENST00000545484 TSPYL4Q9UJ04 414 aa28.27■■■□□ 2.12
CCND1-206ENST00000545484 NBPF26B4DH59 902 aa28.26■■■□□ 2.11
CCND1-206ENST00000545484 GIGYF1O75420 1035 aaPredicted RBP28.26■■■□□ 2.11
CCND1-206ENST00000545484 NBPF10Q6P3W6 841 aaKnown RBP28.26■■■□□ 2.11
CCND1-206ENST00000545484 NBPF15Q8N660 670 aa28.26■■■□□ 2.11
CCND1-206ENST00000545484 ARFGEF1Q9Y6D6 1849 aa28.26■■■□□ 2.11
CCND1-206ENST00000545484 KCNA3P22001 575 aa28.25■■■□□ 2.11
CCND1-206ENST00000545484 CHRNA5P30532 468 aa28.25■■■□□ 2.11
CCND1-206ENST00000545484 CARMIL3Q8ND23 1372 aa28.24■■■□□ 2.11
CCND1-206ENST00000545484 DLEC1Q9Y238 1755 aa28.24■■■□□ 2.11
CCND1-206ENST00000545484 PIM2Q9P1W9 311 aa28.23■■■□□ 2.11
CCND1-206ENST00000545484 ANKRD31Q8N7Z5 1873 aa28.21■■■□□ 2.11
CCND1-206ENST00000545484 SETDB2Q96T68 719 aa28.21■■■□□ 2.11
CCND1-206ENST00000545484 ZNF652Q9Y2D9 606 aa28.2■■■□□ 2.1
CCND1-206ENST00000545484 DALRD3Q5D0E6 543 aaKnown RBP28.19■■■□□ 2.1
CCND1-206ENST00000545484 BABAM1Q9NWV8 329 aa28.19■■■□□ 2.1
CCND1-206ENST00000545484 TRIM35Q9UPQ4 493 aa28.19■■■□□ 2.1
CCND1-206ENST00000545484 NPHP1O15259 732 aa28.18■■■□□ 2.1
CCND1-206ENST00000545484 CLEC4GQ6UXB4 293 aa28.17■■■□□ 2.1
CCND1-206ENST00000545484 ARHGAP27Q6ZUM4 889 aa28.17■■■□□ 2.1
CCND1-206ENST00000545484 NGEFQ8N5V2 710 aa28.17■■■□□ 2.1
CCND1-206ENST00000545484 PRR5LQ6MZQ0 368 aa28.16■■■□□ 2.1
CCND1-206ENST00000545484 CNBD1Q8NA66 436 aa28.16■■■□□ 2.1
CCND1-206ENST00000545484 LAS1LQ9Y4W2 734 aaKnown RBP28.16■■■□□ 2.1
CCND1-206ENST00000545484 ATP10DQ9P241 1426 aa28.16■■■□□ 2.1
CCND1-206ENST00000545484 ADCY9O60503 1353 aa28.15■■■□□ 2.1
CCND1-206ENST00000545484 MYL6BP14649 208 aa28.15■■■□□ 2.1
CCND1-206ENST00000545484 C2CD5Q86YS7 1000 aa28.15■■■□□ 2.1
CCND1-206ENST00000545484 CCDC24Q8N4L8 307 aa28.15■■■□□ 2.1
CCND1-206ENST00000545484 COL11A2P13942 1736 aaPredicted RBP28.15■■■□□ 2.1
CCND1-206ENST00000545484 CCDC184Q52MB2 194 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms