RNA–Protein interactions for RNA: ENST00000545247.6

TSG101-210, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-210ENST00000545247 IL17REQ8NFR9 667 aa25.67■■□□□ 1.7
TSG101-210ENST00000545247 COL15A1P39059 1388 aa25.67■■□□□ 1.7
TSG101-210ENST00000545247 VSIG10Q8N0Z9 540 aa25.66■■□□□ 1.7
TSG101-210ENST00000545247 CHRNA5P30532 468 aa25.65■■□□□ 1.7
TSG101-210ENST00000545247 PIM2Q9P1W9 311 aa25.65■■□□□ 1.7
TSG101-210ENST00000545247 NARFQ9UHQ1 456 aa25.65■■□□□ 1.7
TSG101-210ENST00000545247 GNAT3A8MTJ3 354 aa25.64■■□□□ 1.7
TSG101-210ENST00000545247 TTC5Q8N0Z6 440 aa25.64■■□□□ 1.7
TSG101-210ENST00000545247 GAS2L2Q8NHY3 880 aa25.64■■□□□ 1.7
TSG101-210ENST00000545247 KIF3CO14782 793 aa25.63■■□□□ 1.69
TSG101-210ENST00000545247 CANXP27824 592 aaKnown RBP25.63■■□□□ 1.69
TSG101-210ENST00000545247 NFIXQ14938 502 aa25.63■■□□□ 1.69
TSG101-210ENST00000545247 BCL2L12Q9HB09 334 aa25.63■■□□□ 1.69
TSG101-210ENST00000545247 TEFQ10587 303 aa25.62■■□□□ 1.69
TSG101-210ENST00000545247 ZNF496Q96IT1 587 aaPredicted RBP25.62■■□□□ 1.69
TSG101-210ENST00000545247 PHACTR3Q96KR7 559 aa25.62■■□□□ 1.69
TSG101-210ENST00000545247 NRXN2Q9P2S2 1712 aa25.61■■□□□ 1.69
TSG101-210ENST00000545247 DALRD3Q5D0E6 543 aaKnown RBP25.61■■□□□ 1.69
TSG101-210ENST00000545247 CEP350Q5VT06 3117 aa25.6■■□□□ 1.69
TSG101-210ENST00000545247 PRKAR2BP31323 418 aa25.6■■□□□ 1.69
TSG101-210ENST00000545247 ZNF790Q6PG37 636 aa25.6■■□□□ 1.69
TSG101-210ENST00000545247 STARD3NLO95772 234 aa25.59■■□□□ 1.69
TSG101-210ENST00000545247 CFAP53Q96M91 514 aa25.59■■□□□ 1.69
TSG101-210ENST00000545247 RSPH6AQ9H0K4 717 aa25.59■■□□□ 1.69
TSG101-210ENST00000545247 HEG1Q9ULI3 1381 aa25.58■■□□□ 1.69
TSG101-210ENST00000545247 SBF1O95248 1867 aa25.57■■□□□ 1.68
TSG101-210ENST00000545247 EIF5P55010 431 aaKnown RBP25.57■■□□□ 1.68
TSG101-210ENST00000545247 C9orf131Q5VYM1 1079 aa25.57■■□□□ 1.68
TSG101-210ENST00000545247 CEMIPQ8WUJ3 1361 aa25.56■■□□□ 1.68
TSG101-210ENST00000545247 SERPINB2P05120 415 aa25.56■■□□□ 1.68
TSG101-210ENST00000545247 HSPA6P17066 643 aa25.56■■□□□ 1.68
TSG101-210ENST00000545247 PPP2R1AP30153 589 aa25.56■■□□□ 1.68
TSG101-210ENST00000545247 DLEC1Q9Y238 1755 aa25.55■■□□□ 1.68
TSG101-210ENST00000545247 KCNQ3O43525 872 aa25.55■■□□□ 1.68
TSG101-210ENST00000545247 BICDL1Q6ZP65 573 aa25.55■■□□□ 1.68
TSG101-210ENST00000545247 SCN7AQ01118 1682 aa25.53■■□□□ 1.68
TSG101-210ENST00000545247 TEX13AQ9BXU3 409 aaPredicted RBP25.53■■□□□ 1.68
TSG101-210ENST00000545247 NMRK2Q9NPI5 230 aa25.53■■□□□ 1.68
TSG101-210ENST00000545247 NUDCQ9Y266 331 aa25.53■■□□□ 1.68
TSG101-210ENST00000545247 ZNF330Q9Y3S2 320 aaPredicted RBP25.53■■□□□ 1.68
TSG101-210ENST00000545247 CARMIL3Q8ND23 1372 aa25.53■■□□□ 1.68
TSG101-210ENST00000545247 A0A087WZG4 1122 aa25.52■■□□□ 1.68
TSG101-210ENST00000545247 U2AF1L5P0DN76 240 aaPredicted RBP25.52■■□□□ 1.68
TSG101-210ENST00000545247 U2AF1Q01081 240 aaKnown RBP eCLIP25.52■■□□□ 1.68
TSG101-210ENST00000545247 FMNL2Q96PY5 1086 aa25.52■■□□□ 1.68
TSG101-210ENST00000545247 BTBD11A6QL63 1104 aa25.51■■□□□ 1.67
TSG101-210ENST00000545247 A1BGP04217 495 aa25.51■■□□□ 1.67
TSG101-210ENST00000545247 TBC1D9BQ66K14 1250 aa25.51■■□□□ 1.67
TSG101-210ENST00000545247 RNF181Q9P0P0 153 aa25.51■■□□□ 1.67
TSG101-210ENST00000545247 TBC1D2BQ9UPU7 963 aa25.51■■□□□ 1.67
TSG101-210ENST00000545247 ANKRD31Q8N7Z5 1873 aa25.51■■□□□ 1.67
TSG101-210ENST00000545247 MCM10Q7L590 875 aa25.49■■□□□ 1.67
TSG101-210ENST00000545247 IL6STP40189 918 aaPredicted RBP25.48■■□□□ 1.67
TSG101-210ENST00000545247 C2CD5Q86YS7 1000 aa25.48■■□□□ 1.67
TSG101-210ENST00000545247 CCDC88AQ3V6T2 1871 aa25.47■■□□□ 1.67
TSG101-210ENST00000545247 RASSF7Q02833 373 aa25.47■■□□□ 1.67
TSG101-210ENST00000545247 PRAMEF22A3QJZ6 481 aa25.46■■□□□ 1.67
TSG101-210ENST00000545247 TOMM70O94826 608 aa25.46■■□□□ 1.67
TSG101-210ENST00000545247 DCTN1Q14203 1278 aa25.46■■□□□ 1.67
TSG101-210ENST00000545247 USP16Q9Y5T5 823 aa25.46■■□□□ 1.67
TSG101-210ENST00000545247 PIP4K2AP48426 406 aaPredicted RBP25.45■■□□□ 1.66
TSG101-210ENST00000545247 CCDC24Q8N4L8 307 aa25.45■■□□□ 1.66
TSG101-210ENST00000545247 TTLL6Q8N841 843 aa25.45■■□□□ 1.66
TSG101-210ENST00000545247 RTF1Q92541 710 aaKnown RBP25.45■■□□□ 1.66
TSG101-210ENST00000545247 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
TSG101-210ENST00000545247 H0YIN7 160 aa25.44■■□□□ 1.66
TSG101-210ENST00000545247 COL11A2P13942 1736 aaPredicted RBP25.43■■□□□ 1.66
TSG101-210ENST00000545247 CAMTA2O94983 1202 aa25.43■■□□□ 1.66
TSG101-210ENST00000545247 PRELPP51888 382 aa25.43■■□□□ 1.66
TSG101-210ENST00000545247 DLG5Q8TDM6 1919 aa25.42■■□□□ 1.66
TSG101-210ENST00000545247 PRR5LQ6MZQ0 368 aa25.42■■□□□ 1.66
TSG101-210ENST00000545247 NPM2Q86SE8 214 aaKnown RBP25.42■■□□□ 1.66
TSG101-210ENST00000545247 DZIP3Q86Y13 1208 aaKnown RBP25.41■■□□□ 1.66
TSG101-210ENST00000545247 KDM2BQ8NHM5 1336 aa25.4■■□□□ 1.66
TSG101-210ENST00000545247 ZNF622Q969S3 477 aaKnown RBP eCLIP25.4■■□□□ 1.66
TSG101-210ENST00000545247 BRIP1Q9BX63 1249 aa25.4■■□□□ 1.66
TSG101-210ENST00000545247 TNRC6CQ9HCJ0 1690 aaKnown RBP25.39■■□□□ 1.66
TSG101-210ENST00000545247 CACNA1SQ13698 1873 aa25.39■■□□□ 1.66
TSG101-210ENST00000545247 SETDB2Q96T68 719 aa25.39■■□□□ 1.66
TSG101-210ENST00000545247 RRAGCQ9HB90 399 aa25.39■■□□□ 1.66
TSG101-210ENST00000545247 SNRPA1P09661 255 aaKnown RBP25.38■■□□□ 1.65
TSG101-210ENST00000545247 LMNB1P20700 586 aa25.38■■□□□ 1.65
TSG101-210ENST00000545247 PDE6BP35913 854 aa25.38■■□□□ 1.65
TSG101-210ENST00000545247 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
TSG101-210ENST00000545247 TIAM2Q8IVF5 1701 aa25.37■■□□□ 1.65
TSG101-210ENST00000545247 NFKBIEO00221 500 aa25.37■■□□□ 1.65
TSG101-210ENST00000545247 HTATSF1O43719 755 aaKnown RBP25.37■■□□□ 1.65
TSG101-210ENST00000545247 APLP1P51693 650 aa25.37■■□□□ 1.65
TSG101-210ENST00000545247 RBM46Q8TBY0 533 aaKnown RBP25.37■■□□□ 1.65
TSG101-210ENST00000545247 CNBD1Q8NA66 436 aa25.36■■□□□ 1.65
TSG101-210ENST00000545247 MIS18AQ9NYP9 233 aa25.36■■□□□ 1.65
TSG101-210ENST00000545247 ZNF219Q9P2Y4 722 aaPredicted RBP25.36■■□□□ 1.65
TSG101-210ENST00000545247 FER1L6Q2WGJ9 1857 aa25.35■■□□□ 1.65
TSG101-210ENST00000545247 NBPF26B4DH59 902 aa25.35■■□□□ 1.65
TSG101-210ENST00000545247 NBPF10Q6P3W6 841 aaKnown RBP25.35■■□□□ 1.65
TSG101-210ENST00000545247 NBPF15Q8N660 670 aa25.35■■□□□ 1.65
TSG101-210ENST00000545247 SLX4Q8IY92 1834 aa25.35■■□□□ 1.65
TSG101-210ENST00000545247 NPHP1O15259 732 aa25.34■■□□□ 1.65
TSG101-210ENST00000545247 C21orf2O43822 256 aa25.34■■□□□ 1.65
TSG101-210ENST00000545247 TAF7Q15545 349 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms