RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-206ENST00000544964 BCS1LQ9Y276 419 aa16.7■□□□□ 0.26
ACTN1-206ENST00000544964 COL15A1P39059 1388 aa16.69■□□□□ 0.26
ACTN1-206ENST00000544964 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
ACTN1-206ENST00000544964 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
ACTN1-206ENST00000544964 ANP32CO43423 234 aa16.67■□□□□ 0.26
ACTN1-206ENST00000544964 SBF1O95248 1867 aa16.67■□□□□ 0.26
ACTN1-206ENST00000544964 KIF3CO14782 793 aa16.66■□□□□ 0.26
ACTN1-206ENST00000544964 TM4SF1P30408 202 aa16.66■□□□□ 0.26
ACTN1-206ENST00000544964 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
ACTN1-206ENST00000544964 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
ACTN1-206ENST00000544964 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
ACTN1-206ENST00000544964 FCHSD2O94868 740 aa16.65■□□□□ 0.26
ACTN1-206ENST00000544964 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
ACTN1-206ENST00000544964 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
ACTN1-206ENST00000544964 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
ACTN1-206ENST00000544964 CEMIPQ8WUJ3 1361 aa16.64■□□□□ 0.26
ACTN1-206ENST00000544964 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
ACTN1-206ENST00000544964 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
ACTN1-206ENST00000544964 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
ACTN1-206ENST00000544964 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
ACTN1-206ENST00000544964 COL11A2P13942 1736 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-206ENST00000544964 ZPR1O75312 459 aa16.63■□□□□ 0.25
ACTN1-206ENST00000544964 CHRNA5P30532 468 aa16.63■□□□□ 0.25
ACTN1-206ENST00000544964 NFIXQ14938 502 aa16.63■□□□□ 0.25
ACTN1-206ENST00000544964 PIM2Q9P1W9 311 aa16.63■□□□□ 0.25
ACTN1-206ENST00000544964 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
ACTN1-206ENST00000544964 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
ACTN1-206ENST00000544964 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
ACTN1-206ENST00000544964 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
ACTN1-206ENST00000544964 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
ACTN1-206ENST00000544964 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-206ENST00000544964 CFAP53Q96M91 514 aa16.61■□□□□ 0.25
ACTN1-206ENST00000544964 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
ACTN1-206ENST00000544964 HSPA6P17066 643 aa16.6■□□□□ 0.25
ACTN1-206ENST00000544964 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
ACTN1-206ENST00000544964 DALRD3Q5D0E6 543 aaKnown RBP16.6■□□□□ 0.25
ACTN1-206ENST00000544964 ZNF790Q6PG37 636 aa16.6■□□□□ 0.25
ACTN1-206ENST00000544964 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
ACTN1-206ENST00000544964 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
ACTN1-206ENST00000544964 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
ACTN1-206ENST00000544964 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
ACTN1-206ENST00000544964 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
ACTN1-206ENST00000544964 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
ACTN1-206ENST00000544964 TEFQ10587 303 aa16.59■□□□□ 0.25
ACTN1-206ENST00000544964 C9orf131Q5VYM1 1079 aa16.59■□□□□ 0.25
ACTN1-206ENST00000544964 NMRK2Q9NPI5 230 aa16.58■□□□□ 0.24
ACTN1-206ENST00000544964 CCDC88AQ3V6T2 1871 aa16.57■□□□□ 0.24
ACTN1-206ENST00000544964 STARD3NLO95772 234 aa16.57■□□□□ 0.24
ACTN1-206ENST00000544964 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
ACTN1-206ENST00000544964 SERPINB2P05120 415 aa16.56■□□□□ 0.24
ACTN1-206ENST00000544964 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
ACTN1-206ENST00000544964 KCNQ3O43525 872 aa16.55■□□□□ 0.24
ACTN1-206ENST00000544964 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
ACTN1-206ENST00000544964 LAMB4A4D0S4 1761 aa16.55■□□□□ 0.24
ACTN1-206ENST00000544964 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
ACTN1-206ENST00000544964 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
ACTN1-206ENST00000544964 WDR90Q96KV7 1748 aa16.54■□□□□ 0.24
ACTN1-206ENST00000544964 RASSF7Q02833 373 aa16.54■□□□□ 0.24
ACTN1-206ENST00000544964 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
ACTN1-206ENST00000544964 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
ACTN1-206ENST00000544964 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
ACTN1-206ENST00000544964 A0A087WZG4 1122 aa16.53■□□□□ 0.24
ACTN1-206ENST00000544964 A1BGP04217 495 aa16.53■□□□□ 0.24
ACTN1-206ENST00000544964 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-206ENST00000544964 PRELPP51888 382 aa16.53■□□□□ 0.24
ACTN1-206ENST00000544964 NUDCQ9Y266 331 aa16.53■□□□□ 0.24
ACTN1-206ENST00000544964 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
ACTN1-206ENST00000544964 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
ACTN1-206ENST00000544964 TOMM70O94826 608 aa16.52■□□□□ 0.24
ACTN1-206ENST00000544964 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-206ENST00000544964 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.24
ACTN1-206ENST00000544964 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
ACTN1-206ENST00000544964 MIER1Q8N108 512 aa16.52■□□□□ 0.24
ACTN1-206ENST00000544964 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-206ENST00000544964 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
ACTN1-206ENST00000544964 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.23
ACTN1-206ENST00000544964 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
ACTN1-206ENST00000544964 CAMTA2O94983 1202 aa16.51■□□□□ 0.23
ACTN1-206ENST00000544964 C2CD5Q86YS7 1000 aa16.51■□□□□ 0.23
ACTN1-206ENST00000544964 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
ACTN1-206ENST00000544964 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-206ENST00000544964 ZC3H4Q9UPT8 1303 aaKnown RBP16.5■□□□□ 0.23
ACTN1-206ENST00000544964 PRR5LQ6MZQ0 368 aa16.5■□□□□ 0.23
ACTN1-206ENST00000544964 MCM10Q7L590 875 aa16.5■□□□□ 0.23
ACTN1-206ENST00000544964 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
ACTN1-206ENST00000544964 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
ACTN1-206ENST00000544964 NFKBIEO00221 500 aa16.49■□□□□ 0.23
ACTN1-206ENST00000544964 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-206ENST00000544964 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
ACTN1-206ENST00000544964 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
ACTN1-206ENST00000544964 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
ACTN1-206ENST00000544964 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
ACTN1-206ENST00000544964 RBM46Q8TBY0 533 aaKnown RBP16.48■□□□□ 0.23
ACTN1-206ENST00000544964 H0YIN7 160 aa16.47■□□□□ 0.23
ACTN1-206ENST00000544964 LMNB1P20700 586 aa16.47■□□□□ 0.23
ACTN1-206ENST00000544964 APLP1P51693 650 aa16.47■□□□□ 0.23
ACTN1-206ENST00000544964 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
ACTN1-206ENST00000544964 DZIP3Q86Y13 1208 aaKnown RBP16.47■□□□□ 0.23
ACTN1-206ENST00000544964 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms