RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
PAAF1-215ENST00000544909 APBB1O00213 710 aa15.17■□□□□ 0.02
PAAF1-215ENST00000544909 SSFA2P28290 1259 aa15.17■□□□□ 0.02
PAAF1-215ENST00000544909 RHPN1Q8TCX5 695 aa15.17■□□□□ 0.02
PAAF1-215ENST00000544909 LTV1Q96GA3 475 aaPredicted RBP15.17■□□□□ 0.02
PAAF1-215ENST00000544909 RNMTO43148 476 aaKnown RBP15.17■□□□□ 0.02
PAAF1-215ENST00000544909 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
PAAF1-215ENST00000544909 HYPKQ9NX55 129 aa15.17■□□□□ 0.02
PAAF1-215ENST00000544909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.02
PAAF1-215ENST00000544909 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
PAAF1-215ENST00000544909 ZNF445P59923 1031 aa15.16■□□□□ 0.02
PAAF1-215ENST00000544909 UTYO14607 1347 aa15.16■□□□□ 0.02
PAAF1-215ENST00000544909 ADCY9O60503 1353 aa15.16■□□□□ 0.02
PAAF1-215ENST00000544909 CNTROBQ8N137 903 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 GZF1Q9H116 711 aaPredicted RBP15.15■□□□□ 0.02
PAAF1-215ENST00000544909 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
PAAF1-215ENST00000544909 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 PI4KAP2A4QPH2 592 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 GIGYF1O75420 1035 aaPredicted RBP15.15■□□□□ 0.02
PAAF1-215ENST00000544909 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
PAAF1-215ENST00000544909 HSPA4P34932 840 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 KSR2Q6VAB6 950 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 PI4KAP1Q8N8J0 262 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 RAD50Q92878 1312 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 C1orf167Q5SNV9 1468 aa15.15■□□□□ 0.02
PAAF1-215ENST00000544909 AK9Q5TCS8 1911 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 RGPD2P0DJD1 1756 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 PXDNQ92626 1479 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 SURF6O75683 361 aaKnown RBP15.14■□□□□ 0.01
PAAF1-215ENST00000544909 DDX58O95786 925 aaKnown RBP15.14■□□□□ 0.01
PAAF1-215ENST00000544909 NEK4P51957 841 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 USHBP1Q8N6Y0 703 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 GPATCH3Q96I76 525 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
PAAF1-215ENST00000544909 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
PAAF1-215ENST00000544909 MBD3O95983 291 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 TMX3Q96JJ7 454 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 ANO2Q9NQ90 1003 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 MRC1P22897 1456 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 ERBB3P21860 1342 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 SGSM2O43147 1006 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 PDIA4P13667 645 aaKnown RBP15.13■□□□□ 0.01
PAAF1-215ENST00000544909 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 ANKRD24Q8TF21 1146 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 RUFY2Q8WXA3 655 aa15.13■□□□□ 0.01
PAAF1-215ENST00000544909 COL15A1P39059 1388 aa15.12■□□□□ 0.01
PAAF1-215ENST00000544909 C19orf44Q9H6X5 657 aa15.12■□□□□ 0.01
PAAF1-215ENST00000544909 DDX21Q9NR30 783 aaKnown RBP eCLIP15.12■□□□□ 0.01
PAAF1-215ENST00000544909 LMBRD1Q9NUN5 540 aa15.12■□□□□ 0.01
PAAF1-215ENST00000544909 BRD1O95696 1058 aa15.11■□□□□ 0.01
PAAF1-215ENST00000544909 NBPF7P0C2Y1 421 aaPredicted RBP15.11■□□□□ 0.01
PAAF1-215ENST00000544909 CLASRPQ8N2M8 674 aaKnown RBP15.11■□□□□ 0.01
PAAF1-215ENST00000544909 NECTIN2Q92692 538 aa15.11■□□□□ 0.01
PAAF1-215ENST00000544909 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
PAAF1-215ENST00000544909 SCN11AQ9UI33 1791 aa15.11■□□□□ 0.01
PAAF1-215ENST00000544909 HIP1O00291 1037 aa15.1■□□□□ 0.01
PAAF1-215ENST00000544909 EIF2S2P20042 333 aaKnown RBP15.1■□□□□ 0.01
PAAF1-215ENST00000544909 CLCN1P35523 988 aa15.1■□□□□ 0.01
PAAF1-215ENST00000544909 ANP32BQ92688 251 aaKnown RBP15.1■□□□□ 0.01
PAAF1-215ENST00000544909 CCDC173Q0VFZ6 552 aa15.1■□□□□ 0.01
PAAF1-215ENST00000544909 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
PAAF1-215ENST00000544909 MPRIPQ6WCQ1 1025 aa15.08■□□□□ 0.01
PAAF1-215ENST00000544909 TICAM2Q86XR7 235 aa15.08■□□□□ 0.01
PAAF1-215ENST00000544909 LRRC59Q96AG4 307 aaKnown RBP15.08■□□□□ 0.01
PAAF1-215ENST00000544909 PPP1R9BQ96SB3 815 aa15.08■□□□□ 0.01
PAAF1-215ENST00000544909 SNRKQ9NRH2 765 aa15.08■□□□□ 0.01
PAAF1-215ENST00000544909 PARP4Q9UKK3 1724 aaKnown RBP15.08■□□□□ 0.01
PAAF1-215ENST00000544909 ZDHHC9Q9Y397 364 aa15.08■□□□□ 0.01
PAAF1-215ENST00000544909 HS1BP3Q53T59 392 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 MCTP1Q6DN14 999 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 ZGPATQ8N5A5 531 aaKnown RBP15.08■□□□□ 0
PAAF1-215ENST00000544909 KCNB2Q92953 911 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 TM6SF1Q9BZW5 370 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 RTN4Q9NQC3 1192 aaKnown RBP15.08■□□□□ 0
PAAF1-215ENST00000544909 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
PAAF1-215ENST00000544909 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
PAAF1-215ENST00000544909 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
PAAF1-215ENST00000544909 GRM8O00222 908 aa15.07■□□□□ 0
PAAF1-215ENST00000544909 ORAI2Q96SN7 254 aa15.07■□□□□ 0
PAAF1-215ENST00000544909 PANK2Q9BZ23 570 aa15.07■□□□□ 0
PAAF1-215ENST00000544909 IL1RAPL2Q9NP60 686 aa15.07■□□□□ 0
PAAF1-215ENST00000544909 MAP3K2Q9Y2U5 619 aa15.07■□□□□ 0
PAAF1-215ENST00000544909 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
PAAF1-215ENST00000544909 PKD1L3Q7Z443 1732 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
PAAF1-215ENST00000544909 TSHZ3Q63HK5 1081 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
PAAF1-215ENST00000544909 GAS2L3Q86XJ1 694 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 RAPGEF4Q8WZA2 1011 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 EVI5LQ96CN4 794 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 LSG1Q9H089 658 aaKnown RBP15.06■□□□□ 0
PAAF1-215ENST00000544909 PALD1Q9ULE6 856 aa15.06■□□□□ 0
PAAF1-215ENST00000544909 SPG7Q9UQ90 795 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms