RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 DBF4Q9UBU7 674 aaPredicted RBP22.22■■□□□ 1.15
TNFAIP1-202ENST00000544907 HDAC5Q9UQL6 1122 aa22.22■■□□□ 1.15
TNFAIP1-202ENST00000544907 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
TNFAIP1-202ENST00000544907 EPB41L2O43491 1005 aaKnown RBP22.2■■□□□ 1.15
TNFAIP1-202ENST00000544907 POLA2Q14181 598 aa22.2■■□□□ 1.15
TNFAIP1-202ENST00000544907 HSP90AB1P08238 724 aaKnown RBP22.2■■□□□ 1.14
TNFAIP1-202ENST00000544907 MCM4P33991 863 aa22.2■■□□□ 1.14
TNFAIP1-202ENST00000544907 DNAAF4Q8WXU2 420 aa22.2■■□□□ 1.14
TNFAIP1-202ENST00000544907 LRRFIP2Q9Y608 721 aaKnown RBP22.2■■□□□ 1.14
TNFAIP1-202ENST00000544907 PNMA6EA0A0J9YXQ4 647 aa22.19■■□□□ 1.14
TNFAIP1-202ENST00000544907 BEND3Q5T5X7 828 aa22.19■■□□□ 1.14
TNFAIP1-202ENST00000544907 PHAXQ9H814 394 aaKnown RBP22.19■■□□□ 1.14
TNFAIP1-202ENST00000544907 SIPA1L3O60292 1781 aaPredicted RBP22.19■■□□□ 1.14
TNFAIP1-202ENST00000544907 ERC2O15083 957 aa22.18■■□□□ 1.14
TNFAIP1-202ENST00000544907 ADAMTS2O95450 1211 aa22.18■■□□□ 1.14
TNFAIP1-202ENST00000544907 NECTIN2Q92692 538 aa22.18■■□□□ 1.14
TNFAIP1-202ENST00000544907 CHPF2Q9P2E5 772 aa22.18■■□□□ 1.14
TNFAIP1-202ENST00000544907 GIGYF1O75420 1035 aaPredicted RBP22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 ALDH1L1O75891 902 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 MX1P20591 662 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 MEX3CQ5U5Q3 659 aaKnown RBP22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 MPRIPQ6WCQ1 1025 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 AXIN2Q9Y2T1 843 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 PTMSP20962 102 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 HSP90AB4PQ58FF6 505 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 EXOC6BQ9Y2D4 811 aa22.17■■□□□ 1.14
TNFAIP1-202ENST00000544907 ZBTB7CA1YPR0 619 aa22.16■■□□□ 1.14
TNFAIP1-202ENST00000544907 ZC3H6P61129 1189 aaKnown RBP22.16■■□□□ 1.14
TNFAIP1-202ENST00000544907 MTX1Q13505 466 aa22.16■■□□□ 1.14
TNFAIP1-202ENST00000544907 BCL11AQ9H165 835 aa22.15■■□□□ 1.14
TNFAIP1-202ENST00000544907 HYPKQ9NX55 129 aa22.15■■□□□ 1.14
TNFAIP1-202ENST00000544907 CPDO75976 1380 aa22.15■■□□□ 1.14
TNFAIP1-202ENST00000544907 TUBGCP6Q96RT7 1819 aa22.14■■□□□ 1.14
TNFAIP1-202ENST00000544907 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.14
TNFAIP1-202ENST00000544907 IL17RAQ96F46 866 aa22.14■■□□□ 1.14
TNFAIP1-202ENST00000544907 PRDM11Q9NQV5 511 aa22.14■■□□□ 1.14
TNFAIP1-202ENST00000544907 ADCY9O60503 1353 aa22.14■■□□□ 1.14
TNFAIP1-202ENST00000544907 PI4KAP2A4QPH2 592 aa22.14■■□□□ 1.13
TNFAIP1-202ENST00000544907 APBB1O00213 710 aa22.14■■□□□ 1.13
TNFAIP1-202ENST00000544907 PI4KAP1Q8N8J0 262 aa22.14■■□□□ 1.13
TNFAIP1-202ENST00000544907 COL14A1Q05707 1796 aaKnown RBP22.13■■□□□ 1.13
TNFAIP1-202ENST00000544907 KCNQ3O43525 872 aa22.13■■□□□ 1.13
TNFAIP1-202ENST00000544907 RAB3GAP1Q15042 981 aa22.13■■□□□ 1.13
TNFAIP1-202ENST00000544907 COL18A1P39060 1754 aa22.12■■□□□ 1.13
TNFAIP1-202ENST00000544907 PLCH1Q4KWH8 1693 aa22.12■■□□□ 1.13
TNFAIP1-202ENST00000544907 KSR2Q6VAB6 950 aa22.12■■□□□ 1.13
TNFAIP1-202ENST00000544907 RAPGEF4Q8WZA2 1011 aa22.12■■□□□ 1.13
TNFAIP1-202ENST00000544907 CLEC17AQ6ZS10 378 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 PPP1R42Q7Z4L9 355 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 KIF1BPQ96EK5 621 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 C8orf37Q96NL8 207 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 SPG7Q9UQ90 795 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 SPRYD3Q8NCJ5 442 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 GBP4Q96PP9 640 aa22.11■■□□□ 1.13
TNFAIP1-202ENST00000544907 MRC1P22897 1456 aa22.1■■□□□ 1.13
TNFAIP1-202ENST00000544907 ST18O60284 1047 aa22.1■■□□□ 1.13
TNFAIP1-202ENST00000544907 ANAPC15P60006 121 aa22.1■■□□□ 1.13
TNFAIP1-202ENST00000544907 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
TNFAIP1-202ENST00000544907 UTYO14607 1347 aa22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 USP42Q9H9J4 1324 aaKnown RBP22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 CD2BP2O95400 341 aaKnown RBP22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 DDX58O95786 925 aaKnown RBP22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 HSP90AA1P07900 732 aaKnown RBP22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 CHRNA2Q15822 529 aa22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 ESYT1Q9BSJ8 1104 aa22.09■■□□□ 1.13
TNFAIP1-202ENST00000544907 NWD2Q9ULI1 1742 aa22.08■■□□□ 1.13
TNFAIP1-202ENST00000544907 CWC22Q9HCG8 908 aaKnown RBP22.08■■□□□ 1.13
TNFAIP1-202ENST00000544907 MCM2P49736 904 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 RHPN1Q8TCX5 695 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 NGLY1Q96IV0 654 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 SLC52A2Q9HAB3 445 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 SRGAP3O43295 1099 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 NBPF7P0C2Y1 421 aaPredicted RBP22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 RBM42Q9BTD8 480 aaKnown RBP22.07■■□□□ 1.12
TNFAIP1-202ENST00000544907 SURF6O75683 361 aaKnown RBP22.06■■□□□ 1.12
TNFAIP1-202ENST00000544907 PHKG2P15735 406 aa22.06■■□□□ 1.12
TNFAIP1-202ENST00000544907 MCCP23508 829 aa22.06■■□□□ 1.12
TNFAIP1-202ENST00000544907 CHMLP26374 656 aa22.06■■□□□ 1.12
TNFAIP1-202ENST00000544907 ZNF790Q6PG37 636 aa22.06■■□□□ 1.12
TNFAIP1-202ENST00000544907 IFNL2Q8IZJ0 200 aa22.06■■□□□ 1.12
TNFAIP1-202ENST00000544907 KDM6AO15550 1401 aaPredicted RBP22.05■■□□□ 1.12
TNFAIP1-202ENST00000544907 L1TD1Q5T7N2 865 aaKnown RBP22.05■■□□□ 1.12
TNFAIP1-202ENST00000544907 ERC1Q8IUD2 1116 aa22.05■■□□□ 1.12
TNFAIP1-202ENST00000544907 SLIT2O94813 1529 aa22.05■■□□□ 1.12
TNFAIP1-202ENST00000544907 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
TNFAIP1-202ENST00000544907 TTC41PQ6P2S7 1318 aa22.05■■□□□ 1.12
TNFAIP1-202ENST00000544907 SKOR2Q2VWA4 1001 aaPredicted RBP22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 TNPO1Q92973 898 aaKnown RBP22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 ISY1Q9ULR0 285 aaKnown RBP22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 MAP3K2Q9Y2U5 619 aa22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 NUCB2P80303 420 aa22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
TNFAIP1-202ENST00000544907 AFF2P51816 1311 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms