RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
BPTF-208ENST00000544778 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
BPTF-208ENST00000544778 SYCE3A1L190 88 aa23.2■■□□□ 1.3
BPTF-208ENST00000544778 ADAMTS2O95450 1211 aa23.2■■□□□ 1.3
BPTF-208ENST00000544778 CETN1Q12798 172 aa23.19■■□□□ 1.3
BPTF-208ENST00000544778 FERMT3Q86UX7 667 aa23.19■■□□□ 1.3
BPTF-208ENST00000544778 ZSCAN12O43309 604 aa23.19■■□□□ 1.3
BPTF-208ENST00000544778 NOP2P46087 812 aaKnown RBP23.19■■□□□ 1.3
BPTF-208ENST00000544778 URI1O94763 535 aaPredicted RBP23.19■■□□□ 1.3
BPTF-208ENST00000544778 PAFAH1B1P43034 410 aa23.19■■□□□ 1.3
BPTF-208ENST00000544778 PTPN14Q15678 1187 aa23.19■■□□□ 1.3
BPTF-208ENST00000544778 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 PPP1R14CQ8TAE6 165 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 MCM3P25205 808 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 C8orf76Q96K31 380 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 SLC5A1P13866 664 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 SLC12A5Q9H2X9 1139 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 RTEL1-TNFRSF6BF6WH68 1400 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 FSD2A1L4K1 749 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 SFPQP23246 707 aaKnown RBP eCLIP23.18■■□□□ 1.3
BPTF-208ENST00000544778 MAP3K12Q12852 859 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 CCDC144CPQ8IYA2 1237 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 A0A087WZG4 1122 aa23.18■■□□□ 1.3
BPTF-208ENST00000544778 MTIF2P46199 727 aaKnown RBP23.18■■□□□ 1.3
BPTF-208ENST00000544778 ATF7IPQ6VMQ6 1270 aa23.17■■□□□ 1.3
BPTF-208ENST00000544778 SLF2Q8IX21 1173 aa23.17■■□□□ 1.3
BPTF-208ENST00000544778 C6orf229H3BNL8 230 aa23.17■■□□□ 1.3
BPTF-208ENST00000544778 ANKLE2Q86XL3 938 aa23.17■■□□□ 1.3
BPTF-208ENST00000544778 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
BPTF-208ENST00000544778 CCDC194A0A1B0GVG4 234 aa23.17■■□□□ 1.3
BPTF-208ENST00000544778 SYNCQ9H7C4 482 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 ZNF213O14771 459 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 HMGB2P26583 209 aaKnown RBP23.16■■□□□ 1.3
BPTF-208ENST00000544778 PRPF40BQ6NWY9 871 aaKnown RBP23.16■■□□□ 1.3
BPTF-208ENST00000544778 SPATA24Q86W54 205 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 OTUD6BQ8N6M0 293 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 CATIPQ7Z7H3 387 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 CALML4Q96GE6 196 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 CCDC175P0C221 793 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
BPTF-208ENST00000544778 CNNM3Q8NE01 707 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 MVPQ14764 893 aaKnown RBP23.15■■□□□ 1.3
BPTF-208ENST00000544778 IFIT5Q13325 482 aaKnown RBP23.15■■□□□ 1.3
BPTF-208ENST00000544778 RGS22Q8NE09 1264 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 CUX1P39880 1505 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 CCDC40Q4G0X9 1142 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 APBB1IPQ7Z5R6 666 aaPredicted RBP23.15■■□□□ 1.3
BPTF-208ENST00000544778 PDCL2Q8N4E4 241 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 IKBKGQ9Y6K9 419 aa23.15■■□□□ 1.3
BPTF-208ENST00000544778 PDE3AQ14432 1141 aa23.14■■□□□ 1.3
BPTF-208ENST00000544778 ANO10Q9NW15 660 aa23.14■■□□□ 1.3
BPTF-208ENST00000544778 POLR3GO15318 223 aaPredicted RBP23.14■■□□□ 1.29
BPTF-208ENST00000544778 CKAP2LQ8IYA6 745 aa23.14■■□□□ 1.29
BPTF-208ENST00000544778 IFIT3O14879 490 aaKnown RBP23.14■■□□□ 1.29
BPTF-208ENST00000544778 ECM2O94769 699 aaPredicted RBP23.14■■□□□ 1.29
BPTF-208ENST00000544778 ZWINTO95229 277 aa23.14■■□□□ 1.29
BPTF-208ENST00000544778 RAB3IL1Q8TBN0 382 aa23.14■■□□□ 1.29
BPTF-208ENST00000544778 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
BPTF-208ENST00000544778 YEATS4O95619 227 aa23.13■■□□□ 1.29
BPTF-208ENST00000544778 MPHOSPH6Q99547 160 aaKnown RBP23.13■■□□□ 1.29
BPTF-208ENST00000544778 TRMT112Q9UI30 125 aaKnown RBP23.13■■□□□ 1.29
BPTF-208ENST00000544778 KIF20AO95235 890 aa23.12■■□□□ 1.29
BPTF-208ENST00000544778 PODXL2Q9NZ53 605 aa23.12■■□□□ 1.29
BPTF-208ENST00000544778 ALS2CR12Q96Q35 445 aa23.12■■□□□ 1.29
BPTF-208ENST00000544778 CCT2P78371 535 aaKnown RBP23.12■■□□□ 1.29
BPTF-208ENST00000544778 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.296e-7■■■□□ 14.7
BPTF-208ENST00000544778 SCAPERQ9BY12 1400 aa23.12■■□□□ 1.29
BPTF-208ENST00000544778 ACTN2P35609 894 aa23.11■■□□□ 1.29
BPTF-208ENST00000544778 MAATS1Q7Z4T9 603 aa23.11■■□□□ 1.29
BPTF-208ENST00000544778 TRMT1Q9NXH9 659 aaKnown RBP23.11■■□□□ 1.29
BPTF-208ENST00000544778 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
BPTF-208ENST00000544778 BMS1Q14692 1282 aaKnown RBP23.11■■□□□ 1.29
BPTF-208ENST00000544778 MICALCLQ6ZW33 695 aa23.11■■□□□ 1.29
BPTF-208ENST00000544778 GOLGA8AA7E2F4 631 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 GOLGA8BA8MQT2 603 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 LRSAM1Q6UWE0 723 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 A0A1W2PRG0 241 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 KIF1BPQ96EK5 621 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 UTP14AQ9BVJ6 771 aaKnown RBP23.1■■□□□ 1.29
BPTF-208ENST00000544778 PAIP2Q9BPZ3 127 aaKnown RBP23.1■■□□□ 1.29
BPTF-208ENST00000544778 NAA15Q9BXJ9 866 aaKnown RBP23.1■■□□□ 1.29
BPTF-208ENST00000544778 TTC21AQ8NDW8 1320 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 LRRC45Q96CN5 670 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 KIF18AQ8NI77 898 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 CLIP2Q9UDT6 1046 aa23.1■■□□□ 1.29
BPTF-208ENST00000544778 STXBP4Q6ZWJ1 553 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 CCDC174Q6PII3 467 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 AMPD3Q01432 767 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 ISM2Q6H9L7 571 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 IDEP14735 1019 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 AFAP1Q8N556 730 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 CTR9Q6PD62 1173 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 CABP5Q9NP86 173 aa23.09■■□□□ 1.29
BPTF-208ENST00000544778 SREK1Q8WXA9 508 aaKnown RBP23.08■■□□□ 1.29
BPTF-208ENST00000544778 TCP11L1Q9NUJ3 509 aa23.08■■□□□ 1.29
BPTF-208ENST00000544778 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.29
BPTF-208ENST00000544778 MYO1BO43795 1136 aa23.08■■□□□ 1.28
BPTF-208ENST00000544778 CCDC8Q9H0W5 538 aaPredicted RBP23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms