RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
LMO3-231ENST00000544754 SLC4A9Q96Q91 983 aa15.99■□□□□ 0.15
LMO3-231ENST00000544754 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
LMO3-231ENST00000544754 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
LMO3-231ENST00000544754 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
LMO3-231ENST00000544754 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
LMO3-231ENST00000544754 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
LMO3-231ENST00000544754 TNS1Q9HBL0 1735 aaKnown RBP15.98■□□□□ 0.15
LMO3-231ENST00000544754 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
LMO3-231ENST00000544754 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
LMO3-231ENST00000544754 TAF1LQ8IZX4 1826 aa15.97■□□□□ 0.15
LMO3-231ENST00000544754 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
LMO3-231ENST00000544754 ZKSCAN2Q63HK3 967 aa15.97■□□□□ 0.15
LMO3-231ENST00000544754 G2E3Q7L622 706 aa15.97■□□□□ 0.15
LMO3-231ENST00000544754 TNNQ9UQP3 1299 aa15.97■□□□□ 0.15
LMO3-231ENST00000544754 LOC102724428A0A0B4J2F2 783 aa15.96■□□□□ 0.15
LMO3-231ENST00000544754 TRIM37O94972 964 aa15.96■□□□□ 0.15
LMO3-231ENST00000544754 NEFLP07196 543 aa15.96■□□□□ 0.15
LMO3-231ENST00000544754 SIK1P57059 783 aa15.96■□□□□ 0.15
LMO3-231ENST00000544754 PDIA6Q15084 440 aa15.96■□□□□ 0.15
LMO3-231ENST00000544754 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
LMO3-231ENST00000544754 DBF4Q9UBU7 674 aaPredicted RBP15.96■□□□□ 0.15
LMO3-231ENST00000544754 RREB1Q92766 1687 aa15.95■□□□□ 0.14
LMO3-231ENST00000544754 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
LMO3-231ENST00000544754 ANXA1P04083 346 aa15.95■□□□□ 0.14
LMO3-231ENST00000544754 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
LMO3-231ENST00000544754 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
LMO3-231ENST00000544754 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
LMO3-231ENST00000544754 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
LMO3-231ENST00000544754 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
LMO3-231ENST00000544754 TRIM27P14373 513 aa15.94■□□□□ 0.14
LMO3-231ENST00000544754 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
LMO3-231ENST00000544754 ATF7IPQ6VMQ6 1270 aa15.94■□□□□ 0.14
LMO3-231ENST00000544754 ARHGAP45Q92619 1136 aa15.94■□□□□ 0.14
LMO3-231ENST00000544754 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
LMO3-231ENST00000544754 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
LMO3-231ENST00000544754 A1BGP04217 495 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
LMO3-231ENST00000544754 PIP4K2AP48426 406 aaPredicted RBP15.93■□□□□ 0.14
LMO3-231ENST00000544754 FLIIQ13045 1269 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 ITPK1Q13572 414 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 CLUAP1Q96AJ1 413 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
LMO3-231ENST00000544754 HYPKQ9NX55 129 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 PTPRCP08575 1304 aa15.93■□□□□ 0.14
LMO3-231ENST00000544754 NBPF26B4DH59 902 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 STARD3NLO95772 234 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 MYL6BP14649 208 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 FKBP8Q14318 412 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 NBPF14Q5TI25 921 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 NBPF10Q6P3W6 841 aaKnown RBP15.92■□□□□ 0.14
LMO3-231ENST00000544754 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 NBPF15Q8N660 670 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
LMO3-231ENST00000544754 API5Q9BZZ5 524 aaKnown RBP15.92■□□□□ 0.14
LMO3-231ENST00000544754 RLBP1P12271 317 aa15.91■□□□□ 0.14
LMO3-231ENST00000544754 DZIP1LQ8IYY4 767 aaKnown RBP15.91■□□□□ 0.14
LMO3-231ENST00000544754 RGPD3A6NKT7 1758 aaPredicted RBP15.9■□□□□ 0.14
LMO3-231ENST00000544754 RGPD4Q7Z3J3 1758 aa15.9■□□□□ 0.14
LMO3-231ENST00000544754 MS4A1P11836 297 aa15.9■□□□□ 0.14
LMO3-231ENST00000544754 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
LMO3-231ENST00000544754 ABCC4O15439 1325 aa15.9■□□□□ 0.14
LMO3-231ENST00000544754 ARFGEF2Q9Y6D5 1785 aa15.9■□□□□ 0.14
LMO3-231ENST00000544754 NUP188Q5SRE5 1749 aa15.89■□□□□ 0.13
LMO3-231ENST00000544754 KCNQ4P56696 695 aa15.89■□□□□ 0.13
LMO3-231ENST00000544754 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
LMO3-231ENST00000544754 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
LMO3-231ENST00000544754 CCNL1Q9UK58 526 aaPredicted RBP15.89■□□□□ 0.13
LMO3-231ENST00000544754 GTF3C3Q9Y5Q9 886 aa15.89■□□□□ 0.13
LMO3-231ENST00000544754 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
LMO3-231ENST00000544754 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
LMO3-231ENST00000544754 XAGE3Q8WTP9 111 aa15.88■□□□□ 0.13
LMO3-231ENST00000544754 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
LMO3-231ENST00000544754 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
LMO3-231ENST00000544754 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
LMO3-231ENST00000544754 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
LMO3-231ENST00000544754 ADCY9O60503 1353 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 PXDNLA1KZ92 1463 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 F6X3S4 739 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 APBA3O96018 575 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
LMO3-231ENST00000544754 INTS5Q6P9B9 1019 aaKnown RBP15.87■□□□□ 0.13
LMO3-231ENST00000544754 COPS6Q7L5N1 327 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 EXOC6Q8TAG9 804 aa15.87■□□□□ 0.13
LMO3-231ENST00000544754 PLSCR1O15162 318 aa15.86■□□□□ 0.13
LMO3-231ENST00000544754 CNTNAP4Q9C0A0 1308 aa15.86■□□□□ 0.13
LMO3-231ENST00000544754 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
LMO3-231ENST00000544754 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
LMO3-231ENST00000544754 MVPQ14764 893 aaKnown RBP15.85■□□□□ 0.13
LMO3-231ENST00000544754 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
LMO3-231ENST00000544754 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
LMO3-231ENST00000544754 LRRC4BQ9NT99 713 aa15.85■□□□□ 0.13
LMO3-231ENST00000544754 AFDNP55196 1824 aaKnown RBP15.84■□□□□ 0.13
LMO3-231ENST00000544754 IL6STP40189 918 aaPredicted RBP15.84■□□□□ 0.13
LMO3-231ENST00000544754 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
LMO3-231ENST00000544754 INTS3Q68E01 1043 aaKnown RBP15.84■□□□□ 0.13
LMO3-231ENST00000544754 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
LMO3-231ENST00000544754 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms