RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 DALRD3Q5D0E6 543 aaKnown RBP18.75■□□□□ 0.59
SEMA4D-224ENST00000544513 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
SEMA4D-224ENST00000544513 ZBTB1Q9Y2K1 713 aa18.75■□□□□ 0.59
SEMA4D-224ENST00000544513 COL15A1P39059 1388 aa18.74■□□□□ 0.59
SEMA4D-224ENST00000544513 NFIXQ14938 502 aa18.73■□□□□ 0.59
SEMA4D-224ENST00000544513 IL17REQ8NFR9 667 aa18.73■□□□□ 0.59
SEMA4D-224ENST00000544513 BCL2L12Q9HB09 334 aa18.73■□□□□ 0.59
SEMA4D-224ENST00000544513 CHRNA5P30532 468 aa18.72■□□□□ 0.59
SEMA4D-224ENST00000544513 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
SEMA4D-224ENST00000544513 C9orf131Q5VYM1 1079 aa18.71■□□□□ 0.59
SEMA4D-224ENST00000544513 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
SEMA4D-224ENST00000544513 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-224ENST00000544513 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-224ENST00000544513 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
SEMA4D-224ENST00000544513 AFDNP55196 1824 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-224ENST00000544513 SIPA1L3O60292 1781 aaPredicted RBP18.69■□□□□ 0.58
SEMA4D-224ENST00000544513 STARD3NLO95772 234 aa18.69■□□□□ 0.58
SEMA4D-224ENST00000544513 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
SEMA4D-224ENST00000544513 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
SEMA4D-224ENST00000544513 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
SEMA4D-224ENST00000544513 CEMIPQ8WUJ3 1361 aa18.68■□□□□ 0.58
SEMA4D-224ENST00000544513 TOMM70O94826 608 aa18.68■□□□□ 0.58
SEMA4D-224ENST00000544513 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
SEMA4D-224ENST00000544513 NMRK2Q9NPI5 230 aa18.68■□□□□ 0.58
SEMA4D-224ENST00000544513 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
SEMA4D-224ENST00000544513 SERPINB2P05120 415 aa18.67■□□□□ 0.58
SEMA4D-224ENST00000544513 TEFQ10587 303 aa18.67■□□□□ 0.58
SEMA4D-224ENST00000544513 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
SEMA4D-224ENST00000544513 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
SEMA4D-224ENST00000544513 RSPH6AQ9H0K4 717 aa18.66■□□□□ 0.58
SEMA4D-224ENST00000544513 SBF1O95248 1867 aa18.65■□□□□ 0.58
SEMA4D-224ENST00000544513 A0A087WZG4 1122 aa18.65■□□□□ 0.58
SEMA4D-224ENST00000544513 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
SEMA4D-224ENST00000544513 DLEC1Q9Y238 1755 aa18.64■□□□□ 0.57
SEMA4D-224ENST00000544513 RNF181Q9P0P0 153 aa18.64■□□□□ 0.57
SEMA4D-224ENST00000544513 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
SEMA4D-224ENST00000544513 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SEMA4D-224ENST00000544513 APLP1P51693 650 aa18.63■□□□□ 0.57
SEMA4D-224ENST00000544513 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
SEMA4D-224ENST00000544513 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
SEMA4D-224ENST00000544513 TTLL6Q8N841 843 aa18.62■□□□□ 0.57
SEMA4D-224ENST00000544513 RBM46Q8TBY0 533 aaKnown RBP18.62■□□□□ 0.57
SEMA4D-224ENST00000544513 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
SEMA4D-224ENST00000544513 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
SEMA4D-224ENST00000544513 ZC3H4Q9UPT8 1303 aaKnown RBP18.61■□□□□ 0.57
SEMA4D-224ENST00000544513 KCNQ3O43525 872 aa18.61■□□□□ 0.57
SEMA4D-224ENST00000544513 TBC1D9BQ66K14 1250 aa18.61■□□□□ 0.57
SEMA4D-224ENST00000544513 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
SEMA4D-224ENST00000544513 DNAJC5GQ8N7S2 189 aa18.61■□□□□ 0.57
SEMA4D-224ENST00000544513 SCN7AQ01118 1682 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 H0YIN7 160 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 A1BGP04217 495 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 PRELPP51888 382 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
SEMA4D-224ENST00000544513 BICDL1Q6ZP65 573 aa18.59■□□□□ 0.57
SEMA4D-224ENST00000544513 BRIP1Q9BX63 1249 aa18.59■□□□□ 0.57
SEMA4D-224ENST00000544513 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
SEMA4D-224ENST00000544513 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.57
SEMA4D-224ENST00000544513 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
SEMA4D-224ENST00000544513 LMNB1P20700 586 aa18.58■□□□□ 0.56
SEMA4D-224ENST00000544513 RASSF7Q02833 373 aa18.58■□□□□ 0.56
SEMA4D-224ENST00000544513 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
SEMA4D-224ENST00000544513 PCNTO95613 3336 aa18.58■□□□□ 0.56
SEMA4D-224ENST00000544513 NFKBIEO00221 500 aa18.57■□□□□ 0.56
SEMA4D-224ENST00000544513 FSTL1Q12841 308 aa18.57■□□□□ 0.56
SEMA4D-224ENST00000544513 IFFO2Q5TF58 517 aa18.57■□□□□ 0.56
SEMA4D-224ENST00000544513 PRR5LQ6MZQ0 368 aa18.57■□□□□ 0.56
SEMA4D-224ENST00000544513 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-224ENST00000544513 PDE6BP35913 854 aa18.56■□□□□ 0.56
SEMA4D-224ENST00000544513 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
SEMA4D-224ENST00000544513 RRAGCQ9HB90 399 aa18.56■□□□□ 0.56
SEMA4D-224ENST00000544513 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
SEMA4D-224ENST00000544513 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
SEMA4D-224ENST00000544513 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
SEMA4D-224ENST00000544513 C16orf71Q8IYS4 520 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-224ENST00000544513 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-224ENST00000544513 MCM10Q7L590 875 aa18.54■□□□□ 0.56
SEMA4D-224ENST00000544513 SETDB2Q96T68 719 aa18.54■□□□□ 0.56
SEMA4D-224ENST00000544513 PRAMEF22A3QJZ6 481 aa18.53■□□□□ 0.56
SEMA4D-224ENST00000544513 GLTPD2A6NH11 291 aa18.53■□□□□ 0.56
SEMA4D-224ENST00000544513 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-224ENST00000544513 COL11A2P13942 1736 aaPredicted RBP18.53■□□□□ 0.56
SEMA4D-224ENST00000544513 RTF1Q92541 710 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-224ENST00000544513 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
SEMA4D-224ENST00000544513 CLEC4GQ6UXB4 293 aa18.52■□□□□ 0.56
SEMA4D-224ENST00000544513 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
SEMA4D-224ENST00000544513 CCDC24Q8N4L8 307 aa18.52■□□□□ 0.56
SEMA4D-224ENST00000544513 CNBD1Q8NA66 436 aa18.52■□□□□ 0.56
SEMA4D-224ENST00000544513 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.56
SEMA4D-224ENST00000544513 WDR90Q96KV7 1748 aa18.52■□□□□ 0.55
SEMA4D-224ENST00000544513 RGL2O15211 777 aa18.51■□□□□ 0.55
SEMA4D-224ENST00000544513 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
SEMA4D-224ENST00000544513 CCDC88AQ3V6T2 1871 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 C21orf2O43822 256 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 SRGNP10124 158 aa18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 VEGFAP15692 232 aaPredicted RBP18.5■□□□□ 0.55
SEMA4D-224ENST00000544513 PIP4K2AP48426 406 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms