RNA–Protein interactions for RNA: ENST00000544401.2

PPME1-209, Transcript of protein phosphatase methylesterase 1, human

TSL 4

Gene PPME1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-209	ENST00000544401	CANX	P27824	592 aa	Known RBP	13.85	□□□□□ -0.19
PPME1-209	ENST00000544401	CHRNA5	P30532	468 aa		13.85	□□□□□ -0.19
PPME1-209	ENST00000544401	RBM46	Q8TBY0	533 aa	Known RBP	13.85	□□□□□ -0.19
PPME1-209	ENST00000544401	PDZRN3	Q9UPQ7	1066 aa		13.85	□□□□□ -0.19
PPME1-209	ENST00000544401	CEP350	Q5VT06	3117 aa		13.85	□□□□□ -0.19
PPME1-209	ENST00000544401	GNAT3	A8MTJ3	354 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401		H0YIN7	160 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	SERPINB2	P05120	415 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	FSTL1	Q12841	308 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	CNGB1	Q14028	1251 aa	Predicted RBP	13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	NFIX	Q14938	502 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	NMRK2	Q9NPI5	230 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	C4A	P0C0L4	1744 aa		13.84	□□□□□ -0.19
PPME1-209	ENST00000544401	COL15A1	P39059	1388 aa		13.83	□□□□□ -0.19
PPME1-209	ENST00000544401	TTLL6	Q8N841	843 aa		13.83	□□□□□ -0.2
PPME1-209	ENST00000544401	NUDC	Q9Y266	331 aa		13.83	□□□□□ -0.2
PPME1-209	ENST00000544401	ZBTB1	Q9Y2K1	713 aa		13.83	□□□□□ -0.2
PPME1-209	ENST00000544401	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.83	□□□□□ -0.2
PPME1-209	ENST00000544401	C2CD5	Q86YS7	1000 aa		13.82	□□□□□ -0.2
PPME1-209	ENST00000544401	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.82	□□□□□ -0.2
PPME1-209	ENST00000544401	PER1	O15534	1290 aa	Predicted RBP	13.81	□□□□□ -0.2
PPME1-209	ENST00000544401	LMNB1	P20700	586 aa		13.81	□□□□□ -0.2
PPME1-209	ENST00000544401	BICDL1	Q6ZP65	573 aa		13.81	□□□□□ -0.2
PPME1-209	ENST00000544401	FMNL2	Q96PY5	1086 aa		13.81	□□□□□ -0.2
PPME1-209	ENST00000544401	PDE6B	P35913	854 aa		13.8	□□□□□ -0.2
PPME1-209	ENST00000544401	ZNF790	Q6PG37	636 aa		13.8	□□□□□ -0.2
PPME1-209	ENST00000544401	RTF1	Q92541	710 aa	Known RBP	13.8	□□□□□ -0.2
PPME1-209	ENST00000544401	RRAGC	Q9HB90	399 aa		13.8	□□□□□ -0.2
PPME1-209	ENST00000544401	DPY19L2	Q6NUT2	758 aa		13.79	□□□□□ -0.2
PPME1-209	ENST00000544401	SMC1B	Q8NDV3	1235 aa		13.79	□□□□□ -0.2
PPME1-209	ENST00000544401	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
PPME1-209	ENST00000544401	NPC1L1	Q9UHC9	1359 aa		13.79	□□□□□ -0.2
PPME1-209	ENST00000544401	BTBD11	A6QL63	1104 aa		13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	NEFM	P07197	916 aa		13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	VEGFA	P15692	232 aa	Predicted RBP	13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	IL6ST	P40189	918 aa	Predicted RBP	13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	EIF5	P55010	431 aa	Known RBP	13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	ZNF496	Q96IT1	587 aa	Predicted RBP	13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	SETDB2	Q96T68	719 aa		13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	BRIP1	Q9BX63	1249 aa		13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	COL5A3	P25940	1745 aa	Predicted RBP	13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	KIF13B	Q9NQT8	1826 aa		13.78	□□□□□ -0.2
PPME1-209	ENST00000544401	MRC1	P22897	1456 aa		13.77	□□□□□ -0.21
PPME1-209	ENST00000544401	ST5	P78524	1137 aa		13.77	□□□□□ -0.21
PPME1-209	ENST00000544401	HEG1	Q9ULI3	1381 aa		13.77	□□□□□ -0.21
PPME1-209	ENST00000544401	SOGA3	Q5TF21	947 aa		13.76	□□□□□ -0.21
PPME1-209	ENST00000544401	CNBD1	Q8NA66	436 aa		13.76	□□□□□ -0.21
PPME1-209	ENST00000544401	IL17RE	Q8NFR9	667 aa		13.76	□□□□□ -0.21
PPME1-209	ENST00000544401	TBC1D2B	Q9UPU7	963 aa		13.76	□□□□□ -0.21
PPME1-209	ENST00000544401	ZNF652	Q9Y2D9	606 aa		13.76	□□□□□ -0.21
PPME1-209	ENST00000544401	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.76	□□□□□ -0.21
PPME1-209	ENST00000544401	CARMIL3	Q8ND23	1372 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	GLTPD2	A6NH11	291 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	PRKAR2B	P31323	418 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	RASSF7	Q02833	373 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	TBC1D9B	Q66K14	1250 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	CNKSR1	Q969H4	720 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	BCL2L12	Q9HB09	334 aa		13.75	□□□□□ -0.21
PPME1-209	ENST00000544401	KCP	Q6ZWJ8	1503 aa		13.74	□□□□□ -0.21
PPME1-209	ENST00000544401	MYH14	Q7Z406	1995 aa	Known RBP	13.74	□□□□□ -0.21
PPME1-209	ENST00000544401	DNAJC5G	Q8N7S2	189 aa		13.74	□□□□□ -0.21
PPME1-209	ENST00000544401	KLRG1	Q96E93	195 aa		13.74	□□□□□ -0.21
PPME1-209	ENST00000544401	SNRPA1	P09661	255 aa	Known RBP	13.73	□□□□□ -0.21
PPME1-209	ENST00000544401	ERFE	Q4G0M1	354 aa		13.73	□□□□□ -0.21
PPME1-209	ENST00000544401	DZIP3	Q86Y13	1208 aa	Known RBP	13.73	□□□□□ -0.21
PPME1-209	ENST00000544401	SCN11A	Q9UI33	1791 aa		13.73	□□□□□ -0.21
PPME1-209	ENST00000544401	C21orf2	O43822	256 aa		13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	A1BG	P04217	495 aa		13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	STYK1	Q6J9G0	422 aa		13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	CLEC4G	Q6UXB4	293 aa		13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	TAOK3	Q9H2K8	898 aa		13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	TJP1	Q07157	1748 aa		13.72	□□□□□ -0.21
PPME1-209	ENST00000544401	HTATSF1	O43719	755 aa	Known RBP	13.71	□□□□□ -0.21
PPME1-209	ENST00000544401	GTF2E1	P29083	439 aa	Predicted RBP	13.71	□□□□□ -0.21
PPME1-209	ENST00000544401	PRR5L	Q6MZQ0	368 aa		13.71	□□□□□ -0.21
PPME1-209	ENST00000544401	MASTL	Q96GX5	879 aa		13.71	□□□□□ -0.21
PPME1-209	ENST00000544401	RSPH6A	Q9H0K4	717 aa		13.71	□□□□□ -0.21
PPME1-209	ENST00000544401	KIAA1551	Q9HCM1	1747 aa		13.7	□□□□□ -0.22
PPME1-209	ENST00000544401	CAMTA2	O94983	1202 aa		13.7	□□□□□ -0.22
PPME1-209	ENST00000544401	TPTE2	Q6XPS3	522 aa		13.7	□□□□□ -0.22
PPME1-209	ENST00000544401	PHACTR3	Q96KR7	559 aa		13.7	□□□□□ -0.22
PPME1-209	ENST00000544401	NFKBIE	O00221	500 aa		13.69	□□□□□ -0.22
PPME1-209	ENST00000544401	PNN	Q9H307	717 aa	Known RBP	13.69	□□□□□ -0.22
PPME1-209	ENST00000544401	CEMIP	Q8WUJ3	1361 aa		13.69	□□□□□ -0.22
PPME1-209	ENST00000544401	RGL2	O15211	777 aa		13.68	□□□□□ -0.22
PPME1-209	ENST00000544401	CCDC24	Q8N4L8	307 aa		13.68	□□□□□ -0.22
PPME1-209	ENST00000544401	PNISR	Q8TF01	805 aa	Known RBP	13.68	□□□□□ -0.22
PPME1-209	ENST00000544401	ARFGEF1	Q9Y6D6	1849 aa		13.68	□□□□□ -0.22
PPME1-209	ENST00000544401	LTBP3	Q9NS15	1303 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	IQCA1L	A6NCM1	817 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	KCNQ3	O43525	872 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	SRGN	P10124	158 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	NPR1	P16066	1061 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	PPP2R1A	P30153	589 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	HTRA3	P83110	453 aa		13.67	□□□□□ -0.22
PPME1-209	ENST00000544401	TAF7	Q15545	349 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms