RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
LMO3-230ENST00000544276 COL15A1P39059 1388 aa14.11□□□□□ -0.15
LMO3-230ENST00000544276 CEMIPQ8WUJ3 1361 aa14.11□□□□□ -0.15
LMO3-230ENST00000544276 TEFQ10587 303 aa14.11□□□□□ -0.15
LMO3-230ENST00000544276 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
LMO3-230ENST00000544276 EIF5P55010 431 aaKnown RBP14.1□□□□□ -0.15
LMO3-230ENST00000544276 DALRD3Q5D0E6 543 aaKnown RBP14.1□□□□□ -0.15
LMO3-230ENST00000544276 ARHGAP27Q6ZUM4 889 aa14.1□□□□□ -0.15
LMO3-230ENST00000544276 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
LMO3-230ENST00000544276 NUDCQ9Y266 331 aa14.1□□□□□ -0.15
LMO3-230ENST00000544276 A0A087WZG4 1122 aa14.09□□□□□ -0.15
LMO3-230ENST00000544276 NFIXQ14938 502 aa14.09□□□□□ -0.15
LMO3-230ENST00000544276 ZNF496Q96IT1 587 aaPredicted RBP14.09□□□□□ -0.15
LMO3-230ENST00000544276 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
LMO3-230ENST00000544276 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
LMO3-230ENST00000544276 KIF3CO14782 793 aa14.08□□□□□ -0.16
LMO3-230ENST00000544276 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
LMO3-230ENST00000544276 PRKAR2BP31323 418 aa14.08□□□□□ -0.16
LMO3-230ENST00000544276 ZNF526Q8TF50 670 aaPredicted RBP14.08□□□□□ -0.16
LMO3-230ENST00000544276 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
LMO3-230ENST00000544276 FMNL2Q96PY5 1086 aa14.08□□□□□ -0.16
LMO3-230ENST00000544276 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
LMO3-230ENST00000544276 IL6STP40189 918 aaPredicted RBP14.07□□□□□ -0.16
LMO3-230ENST00000544276 CNGB1Q14028 1251 aaPredicted RBP14.07□□□□□ -0.16
LMO3-230ENST00000544276 SERPINB2P05120 415 aa14.06□□□□□ -0.16
LMO3-230ENST00000544276 HSPA6P17066 643 aa14.06□□□□□ -0.16
LMO3-230ENST00000544276 CHRNA5P30532 468 aa14.06□□□□□ -0.16
LMO3-230ENST00000544276 CEP350Q5VT06 3117 aa14.06□□□□□ -0.16
LMO3-230ENST00000544276 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
LMO3-230ENST00000544276 HTATSF1O43719 755 aaKnown RBP14.05□□□□□ -0.16
LMO3-230ENST00000544276 PDZRN3Q9UPQ7 1066 aa14.05□□□□□ -0.16
LMO3-230ENST00000544276 UBR2Q8IWV8 1755 aa14.04□□□□□ -0.16
LMO3-230ENST00000544276 TOMM70O94826 608 aa14.04□□□□□ -0.16
LMO3-230ENST00000544276 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
LMO3-230ENST00000544276 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
LMO3-230ENST00000544276 C9orf131Q5VYM1 1079 aa14.04□□□□□ -0.16
LMO3-230ENST00000544276 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
LMO3-230ENST00000544276 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
LMO3-230ENST00000544276 ZC3H4Q9UPT8 1303 aaKnown RBP14.03□□□□□ -0.16
LMO3-230ENST00000544276 RGL2O15211 777 aa14.02□□□□□ -0.17
LMO3-230ENST00000544276 TTLL6Q8N841 843 aa14.02□□□□□ -0.17
LMO3-230ENST00000544276 BRIP1Q9BX63 1249 aa14.02□□□□□ -0.17
LMO3-230ENST00000544276 BRCA1P38398 1863 aaKnown RBP14.01□□□□□ -0.17
LMO3-230ENST00000544276 NRXN2Q9P2S2 1712 aa14.01□□□□□ -0.17
LMO3-230ENST00000544276 H0YIN7 160 aa14.01□□□□□ -0.17
LMO3-230ENST00000544276 A1BGP04217 495 aa14.01□□□□□ -0.17
LMO3-230ENST00000544276 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
LMO3-230ENST00000544276 TBC1D9BQ66K14 1250 aa14.01□□□□□ -0.17
LMO3-230ENST00000544276 NPM2Q86SE8 214 aaKnown RBP14.01□□□□□ -0.17
LMO3-230ENST00000544276 CARMIL3Q8ND23 1372 aa14□□□□□ -0.17
LMO3-230ENST00000544276 KDM2BQ8NHM5 1336 aa14□□□□□ -0.17
LMO3-230ENST00000544276 KCNQ3O43525 872 aa14□□□□□ -0.17
LMO3-230ENST00000544276 CAMTA2O94983 1202 aa14□□□□□ -0.17
LMO3-230ENST00000544276 PDE6BP35913 854 aa14□□□□□ -0.17
LMO3-230ENST00000544276 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
LMO3-230ENST00000544276 C2CD5Q86YS7 1000 aa14□□□□□ -0.17
LMO3-230ENST00000544276 RNF181Q9P0P0 153 aa14□□□□□ -0.17
LMO3-230ENST00000544276 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
LMO3-230ENST00000544276 USP16Q9Y5T5 823 aa14□□□□□ -0.17
LMO3-230ENST00000544276 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
LMO3-230ENST00000544276 MCM10Q7L590 875 aa13.99□□□□□ -0.17
LMO3-230ENST00000544276 RBM46Q8TBY0 533 aaKnown RBP13.99□□□□□ -0.17
LMO3-230ENST00000544276 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
LMO3-230ENST00000544276 NMRK2Q9NPI5 230 aa13.99□□□□□ -0.17
LMO3-230ENST00000544276 ARFGEF1Q9Y6D6 1849 aa13.99□□□□□ -0.17
LMO3-230ENST00000544276 LMNB1P20700 586 aa13.98□□□□□ -0.17
LMO3-230ENST00000544276 APLP1P51693 650 aa13.98□□□□□ -0.17
LMO3-230ENST00000544276 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
LMO3-230ENST00000544276 PRR5LQ6MZQ0 368 aa13.98□□□□□ -0.17
LMO3-230ENST00000544276 DZIP3Q86Y13 1208 aaKnown RBP13.98□□□□□ -0.17
LMO3-230ENST00000544276 SIPA1L3O60292 1781 aaPredicted RBP13.98□□□□□ -0.17
LMO3-230ENST00000544276 NEFMP07197 916 aa13.97□□□□□ -0.17
LMO3-230ENST00000544276 ZNF330Q9Y3S2 320 aaPredicted RBP13.97□□□□□ -0.17
LMO3-230ENST00000544276 FSTL1Q12841 308 aa13.96□□□□□ -0.17
LMO3-230ENST00000544276 CNBD1Q8NA66 436 aa13.96□□□□□ -0.17
LMO3-230ENST00000544276 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
LMO3-230ENST00000544276 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.17
LMO3-230ENST00000544276 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.17
LMO3-230ENST00000544276 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.17
LMO3-230ENST00000544276 PRAMEF22A3QJZ6 481 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 NFKBIEO00221 500 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 ST5P78524 1137 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 RASSF7Q02833 373 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 DCTN1Q14203 1278 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 STYK1Q6J9G0 422 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 C16orf71Q8IYS4 520 aaPredicted RBP13.95□□□□□ -0.18
LMO3-230ENST00000544276 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
LMO3-230ENST00000544276 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
LMO3-230ENST00000544276 PRELPP51888 382 aa13.94□□□□□ -0.18
LMO3-230ENST00000544276 CNKSR1Q969H4 720 aa13.94□□□□□ -0.18
LMO3-230ENST00000544276 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.18
LMO3-230ENST00000544276 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
LMO3-230ENST00000544276 LTBP3Q9NS15 1303 aa13.93□□□□□ -0.18
LMO3-230ENST00000544276 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
LMO3-230ENST00000544276 NBPF26B4DH59 902 aa13.93□□□□□ -0.18
LMO3-230ENST00000544276 SRGNP10124 158 aa13.93□□□□□ -0.18
LMO3-230ENST00000544276 SOGA3Q5TF21 947 aa13.93□□□□□ -0.18
LMO3-230ENST00000544276 NBPF10Q6P3W6 841 aaKnown RBP13.93□□□□□ -0.18
LMO3-230ENST00000544276 NBPF15Q8N660 670 aa13.93□□□□□ -0.18
LMO3-230ENST00000544276 RRAGCQ9HB90 399 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms