RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
LDHB-210ENST00000544151 NEFMP07197 916 aa20.81■□□□□ 0.92
LDHB-210ENST00000544151 MCM10Q7L590 875 aa20.81■□□□□ 0.92
LDHB-210ENST00000544151 HEG1Q9ULI3 1381 aa20.81■□□□□ 0.92
LDHB-210ENST00000544151 SCN7AQ01118 1682 aa20.8■□□□□ 0.92
LDHB-210ENST00000544151 C10orf71Q711Q0 1435 aa20.8■□□□□ 0.92
LDHB-210ENST00000544151 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
LDHB-210ENST00000544151 ZNF496Q96IT1 587 aaPredicted RBP20.8■□□□□ 0.92
LDHB-210ENST00000544151 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.927e-24■□□□□ 8.2
LDHB-210ENST00000544151 LAMB4A4D0S4 1761 aa20.79■□□□□ 0.92
LDHB-210ENST00000544151 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
LDHB-210ENST00000544151 AFDNP55196 1824 aaKnown RBP20.78■□□□□ 0.92
LDHB-210ENST00000544151 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
LDHB-210ENST00000544151 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
LDHB-210ENST00000544151 MYBBP1AQ9BQG0 1328 aaKnown RBP20.78■□□□□ 0.92
LDHB-210ENST00000544151 PXDNLA1KZ92 1463 aa20.77■□□□□ 0.92
LDHB-210ENST00000544151 FMNL2Q96PY5 1086 aa20.77■□□□□ 0.92
LDHB-210ENST00000544151 WWC3Q9ULE0 1092 aa20.77■□□□□ 0.92
LDHB-210ENST00000544151 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
LDHB-210ENST00000544151 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.91
LDHB-210ENST00000544151 ZPR1O75312 459 aa20.76■□□□□ 0.91
LDHB-210ENST00000544151 STARD3NLO95772 234 aa20.76■□□□□ 0.91
LDHB-210ENST00000544151 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
LDHB-210ENST00000544151 FKBP8Q14318 412 aa20.76■□□□□ 0.91
LDHB-210ENST00000544151 BCORQ6W2J9 1755 aa20.76■□□□□ 0.91
LDHB-210ENST00000544151 KCNQ3O43525 872 aa20.75■□□□□ 0.91
LDHB-210ENST00000544151 HTATSF1O43719 755 aaKnown RBP20.75■□□□□ 0.91
LDHB-210ENST00000544151 USPL1Q5W0Q7 1092 aa20.75■□□□□ 0.91
LDHB-210ENST00000544151 PLEKHF1Q96S99 279 aa20.75■□□□□ 0.91
LDHB-210ENST00000544151 NRXN2Q9P2S2 1712 aa20.73■□□□□ 0.91
LDHB-210ENST00000544151 GRIN3BO60391 1043 aa20.73■□□□□ 0.91
LDHB-210ENST00000544151 TEX13AQ9BXU3 409 aaPredicted RBP20.73■□□□□ 0.91
LDHB-210ENST00000544151 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
LDHB-210ENST00000544151 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
LDHB-210ENST00000544151 DDR1Q08345 913 aa20.72■□□□□ 0.91
LDHB-210ENST00000544151 NARFQ9UHQ1 456 aa20.72■□□□□ 0.91
LDHB-210ENST00000544151 ZNF330Q9Y3S2 320 aaPredicted RBP20.72■□□□□ 0.91
LDHB-210ENST00000544151 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
LDHB-210ENST00000544151 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
LDHB-210ENST00000544151 POLRMTO00411 1230 aaKnown RBP20.69■□□□□ 0.9
LDHB-210ENST00000544151 EIF5P55010 431 aaKnown RBP20.69■□□□□ 0.9
LDHB-210ENST00000544151 DLEC1Q9Y238 1755 aa20.68■□□□□ 0.9
LDHB-210ENST00000544151 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
LDHB-210ENST00000544151 TGFB2P61812 414 aa20.68■□□□□ 0.9
LDHB-210ENST00000544151 TAF7Q15545 349 aaPredicted RBP20.68■□□□□ 0.9
LDHB-210ENST00000544151 ZNF784Q8NCA9 323 aaPredicted RBP20.68■□□□□ 0.9
LDHB-210ENST00000544151 A0A087WZG4 1122 aa20.67■□□□□ 0.9
LDHB-210ENST00000544151 A1BGP04217 495 aa20.67■□□□□ 0.9
LDHB-210ENST00000544151 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
LDHB-210ENST00000544151 THUMPD2Q9BTF0 503 aaKnown RBP20.67■□□□□ 0.9
LDHB-210ENST00000544151 BCL2L12Q9HB09 334 aa20.67■□□□□ 0.9
LDHB-210ENST00000544151 SNRPA1P09661 255 aaKnown RBP20.66■□□□□ 0.9
LDHB-210ENST00000544151 NFIXQ14938 502 aa20.66■□□□□ 0.9
LDHB-210ENST00000544151 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
LDHB-210ENST00000544151 PRKRIP1Q9H875 184 aaPredicted RBP20.66■□□□□ 0.9
LDHB-210ENST00000544151 MIS18AQ9NYP9 233 aa20.66■□□□□ 0.9
LDHB-210ENST00000544151 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
LDHB-210ENST00000544151 A0A0G2JLW4 131 aa20.65■□□□□ 0.9
LDHB-210ENST00000544151 TM4SF1P30408 202 aa20.65■□□□□ 0.9
LDHB-210ENST00000544151 PIP4K2AP48426 406 aaPredicted RBP20.65■□□□□ 0.9
LDHB-210ENST00000544151 WDR43Q15061 677 aaKnown RBP eCLIP20.65■□□□□ 0.9
LDHB-210ENST00000544151 DPEP1P16444 411 aa20.64■□□□□ 0.89
LDHB-210ENST00000544151 PNISRQ8TF01 805 aaKnown RBP20.64■□□□□ 0.89
LDHB-210ENST00000544151 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.89
LDHB-210ENST00000544151 ANKRD31Q8N7Z5 1873 aa20.63■□□□□ 0.89
LDHB-210ENST00000544151 BICDL1Q6ZP65 573 aa20.63■□□□□ 0.89
LDHB-210ENST00000544151 CCDC146Q8IYE0 955 aa20.63■□□□□ 0.89
LDHB-210ENST00000544151 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
LDHB-210ENST00000544151 RIPK4P57078 832 aa20.62■□□□□ 0.89
LDHB-210ENST00000544151 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
LDHB-210ENST00000544151 CARMIL3Q8ND23 1372 aa20.6■□□□□ 0.89
LDHB-210ENST00000544151 SERPINB2P05120 415 aa20.6■□□□□ 0.89
LDHB-210ENST00000544151 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
LDHB-210ENST00000544151 TBC1D9BQ66K14 1250 aa20.6■□□□□ 0.89
LDHB-210ENST00000544151 DZIP3Q86Y13 1208 aaKnown RBP20.6■□□□□ 0.89
LDHB-210ENST00000544151 RRP7AQ9Y3A4 280 aaKnown RBP20.6■□□□□ 0.89
LDHB-210ENST00000544151 CACNA1SQ13698 1873 aa20.6■□□□□ 0.89
LDHB-210ENST00000544151 CAMTA2O94983 1202 aa20.59■□□□□ 0.89
LDHB-210ENST00000544151 CHRNA5P30532 468 aa20.59■□□□□ 0.89
LDHB-210ENST00000544151 LMOD3Q0VAK6 560 aa20.59■□□□□ 0.89
LDHB-210ENST00000544151 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.89
LDHB-210ENST00000544151 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
LDHB-210ENST00000544151 ADCY9O60503 1353 aa20.58■□□□□ 0.88
LDHB-210ENST00000544151 KCNA3P22001 575 aa20.57■□□□□ 0.88
LDHB-210ENST00000544151 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
LDHB-210ENST00000544151 NEUROD2Q15784 382 aa20.57■□□□□ 0.88
LDHB-210ENST00000544151 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
LDHB-210ENST00000544151 PIM2Q9P1W9 311 aa20.57■□□□□ 0.88
LDHB-210ENST00000544151 NUP98P52948 1817 aa20.57■□□□□ 0.88
LDHB-210ENST00000544151 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
LDHB-210ENST00000544151 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
LDHB-210ENST00000544151 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
LDHB-210ENST00000544151 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
LDHB-210ENST00000544151 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
LDHB-210ENST00000544151 DALRD3Q5D0E6 543 aaKnown RBP20.55■□□□□ 0.88
LDHB-210ENST00000544151 ZNF652Q9Y2D9 606 aa20.54■□□□□ 0.88
LDHB-210ENST00000544151 NPHP1O15259 732 aa20.53■□□□□ 0.88
LDHB-210ENST00000544151 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
LDHB-210ENST00000544151 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
LDHB-210ENST00000544151 SBF1O95248 1867 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms