RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZBTB1Q9Y2K1 713 aa30.73■■■□□ 2.51
CHFR-222ENST00000544093 COL15A1P39059 1388 aa30.73■■■□□ 2.51
CHFR-222ENST00000544093 WDR43Q15061 677 aaKnown RBP eCLIP30.72■■■□□ 2.51
CHFR-222ENST00000544093 PNISRQ8TF01 805 aaKnown RBP30.72■■■□□ 2.51
CHFR-222ENST00000544093 A0A087WZG4 1122 aa30.7■■■□□ 2.51
CHFR-222ENST00000544093 PARP3Q9Y6F1 533 aa30.7■■■□□ 2.51
CHFR-222ENST00000544093 UTRNP46939 3433 aa30.69■■■□□ 2.5
CHFR-222ENST00000544093 CHD4Q14839 1912 aa30.69■■■□□ 2.5
CHFR-222ENST00000544093 KIF13BQ9NQT8 1826 aa30.69■■■□□ 2.5
CHFR-222ENST00000544093 NARFQ9UHQ1 456 aa30.69■■■□□ 2.5
CHFR-222ENST00000544093 GOLGB1Q14789 3259 aaKnown RBP30.68■■■□□ 2.5
CHFR-222ENST00000544093 ZNF316A6NFI3 1004 aaPredicted RBP30.68■■■□□ 2.5
CHFR-222ENST00000544093 KCNQ3O43525 872 aa30.68■■■□□ 2.5
CHFR-222ENST00000544093 YY1P25490 414 aa30.68■■■□□ 2.5
CHFR-222ENST00000544093 SRP68Q9UHB9 627 aaKnown RBP30.68■■■□□ 2.5
CHFR-222ENST00000544093 SNRPA1P09661 255 aaKnown RBP30.67■■■□□ 2.5
CHFR-222ENST00000544093 CANXP27824 592 aaKnown RBP30.67■■■□□ 2.5
CHFR-222ENST00000544093 LMOD3Q0VAK6 560 aa30.67■■■□□ 2.5
CHFR-222ENST00000544093 EIF5P55010 431 aaKnown RBP30.66■■■□□ 2.5
CHFR-222ENST00000544093 NPM2Q86SE8 214 aaKnown RBP30.66■■■□□ 2.5
CHFR-222ENST00000544093 PELP1Q8IZL8 1130 aaKnown RBP30.66■■■□□ 2.5
CHFR-222ENST00000544093 GRIN3BO60391 1043 aa30.65■■■□□ 2.5
CHFR-222ENST00000544093 IL6STP40189 918 aaPredicted RBP30.65■■■□□ 2.5
CHFR-222ENST00000544093 FKBP8Q14318 412 aa30.65■■■□□ 2.5
CHFR-222ENST00000544093 USPL1Q5W0Q7 1092 aa30.65■■■□□ 2.5
CHFR-222ENST00000544093 KDM3BQ7LBC6 1761 aa30.64■■■□□ 2.5
CHFR-222ENST00000544093 C10orf71Q711Q0 1435 aa30.64■■■□□ 2.49
CHFR-222ENST00000544093 RIPK4P57078 832 aa30.63■■■□□ 2.49
CHFR-222ENST00000544093 TGFB2P61812 414 aa30.62■■■□□ 2.49
CHFR-222ENST00000544093 RUNDC1Q96C34 613 aa30.62■■■□□ 2.49
CHFR-222ENST00000544093 TMPOP42166 694 aaKnown RBP30.61■■■□□ 2.49
CHFR-222ENST00000544093 TM4SF1P30408 202 aa30.59■■■□□ 2.49
CHFR-222ENST00000544093 LAMB4A4D0S4 1761 aa30.59■■■□□ 2.49
CHFR-222ENST00000544093 BABAM1Q9NWV8 329 aa30.58■■■□□ 2.49
CHFR-222ENST00000544093 ADAMTS8Q9UP79 889 aa30.58■■■□□ 2.49
CHFR-222ENST00000544093 USP16Q9Y5T5 823 aa30.58■■■□□ 2.49
CHFR-222ENST00000544093 A1BGP04217 495 aa30.57■■■□□ 2.48
CHFR-222ENST00000544093 DDR1Q08345 913 aa30.57■■■□□ 2.48
CHFR-222ENST00000544093 THUMPD2Q9BTF0 503 aaKnown RBP30.57■■■□□ 2.48
CHFR-222ENST00000544093 MIS18AQ9NYP9 233 aa30.57■■■□□ 2.48
CHFR-222ENST00000544093 SCN7AQ01118 1682 aa30.57■■■□□ 2.48
CHFR-222ENST00000544093 POLRMTO00411 1230 aaKnown RBP30.56■■■□□ 2.48
CHFR-222ENST00000544093 YBX3P16989 372 aaKnown RBP eCLIP30.56■■■□□ 2.48
CHFR-222ENST00000544093 CCDC146Q8IYE0 955 aa30.56■■■□□ 2.48
CHFR-222ENST00000544093 ZNF330Q9Y3S2 320 aaPredicted RBP30.56■■■□□ 2.48
CHFR-222ENST00000544093 PXDNLA1KZ92 1463 aa30.56■■■□□ 2.48
CHFR-222ENST00000544093 KIAA1551Q9HCM1 1747 aa30.54■■■□□ 2.48
CHFR-222ENST00000544093 NFIXQ14938 502 aa30.54■■■□□ 2.48
CHFR-222ENST00000544093 BCL2L12Q9HB09 334 aa30.53■■■□□ 2.48
CHFR-222ENST00000544093 PRAMEF22A3QJZ6 481 aa30.52■■■□□ 2.48
CHFR-222ENST00000544093 EIF4A1P60842 406 aaKnown RBP30.52■■■□□ 2.48
CHFR-222ENST00000544093 N4BP2Q86UW6 1770 aaPredicted RBP30.51■■■□□ 2.48
CHFR-222ENST00000544093 NRXN2Q9P2S2 1712 aa30.51■■■□□ 2.47
CHFR-222ENST00000544093 GIGYF1O75420 1035 aaPredicted RBP30.51■■■□□ 2.47
CHFR-222ENST00000544093 TSPYL4Q9UJ04 414 aa30.51■■■□□ 2.47
CHFR-222ENST00000544093 TBC1D2BQ9UPU7 963 aa30.51■■■□□ 2.47
CHFR-222ENST00000544093 AFDNP55196 1824 aaKnown RBP30.5■■■□□ 2.47
CHFR-222ENST00000544093 BCORQ6W2J9 1755 aa30.5■■■□□ 2.47
CHFR-222ENST00000544093 RGL2O15211 777 aa30.49■■■□□ 2.47
CHFR-222ENST00000544093 NEUROD2Q15784 382 aa30.49■■■□□ 2.47
CHFR-222ENST00000544093 DZIP3Q86Y13 1208 aaKnown RBP30.49■■■□□ 2.47
CHFR-222ENST00000544093 RRP7AQ9Y3A4 280 aaKnown RBP30.49■■■□□ 2.47
CHFR-222ENST00000544093 ANP32CO43423 234 aa30.48■■■□□ 2.47
CHFR-222ENST00000544093 BRCA1P38398 1863 aaKnown RBP30.47■■■□□ 2.47
CHFR-222ENST00000544093 A0A0G2JLW4 131 aa30.47■■■□□ 2.47
CHFR-222ENST00000544093 SERPINB2P05120 415 aa30.47■■■□□ 2.47
CHFR-222ENST00000544093 ZNF652Q9Y2D9 606 aa30.47■■■□□ 2.47
CHFR-222ENST00000544093 CARMIL3Q8ND23 1372 aa30.46■■■□□ 2.47
CHFR-222ENST00000544093 CAMTA2O94983 1202 aa30.46■■■□□ 2.47
CHFR-222ENST00000544093 DPEP1P16444 411 aa30.46■■■□□ 2.47
CHFR-222ENST00000544093 CLEC4GQ6UXB4 293 aa30.46■■■□□ 2.47
CHFR-222ENST00000544093 NBPF26B4DH59 902 aa30.44■■■□□ 2.46
CHFR-222ENST00000544093 NBPF10Q6P3W6 841 aaKnown RBP30.44■■■□□ 2.46
CHFR-222ENST00000544093 NBPF15Q8N660 670 aa30.44■■■□□ 2.46
CHFR-222ENST00000544093 TRIM35Q9UPQ4 493 aa30.44■■■□□ 2.46
CHFR-222ENST00000544093 ERBB4Q15303 1308 aa30.44■■■□□ 2.46
CHFR-222ENST00000544093 PIP4K2AP48426 406 aaPredicted RBP30.43■■■□□ 2.46
CHFR-222ENST00000544093 TBC1D9BQ66K14 1250 aa30.43■■■□□ 2.46
CHFR-222ENST00000544093 BICDL1Q6ZP65 573 aa30.43■■■□□ 2.46
CHFR-222ENST00000544093 SETDB2Q96T68 719 aa30.43■■■□□ 2.46
CHFR-222ENST00000544093 PIM2Q9P1W9 311 aa30.42■■■□□ 2.46
CHFR-222ENST00000544093 BCS1LQ9Y276 419 aa30.41■■■□□ 2.46
CHFR-222ENST00000544093 WWC3Q9ULE0 1092 aa30.4■■■□□ 2.46
CHFR-222ENST00000544093 ARFGEF1Q9Y6D6 1849 aa30.4■■■□□ 2.46
CHFR-222ENST00000544093 CHL1O00533 1208 aa30.39■■■□□ 2.46
CHFR-222ENST00000544093 KCNA3P22001 575 aa30.39■■■□□ 2.46
CHFR-222ENST00000544093 CALD1Q05682 793 aaKnown RBP30.39■■■□□ 2.46
CHFR-222ENST00000544093 PDZRN3Q9UPQ7 1066 aa30.39■■■□□ 2.46
CHFR-222ENST00000544093 APAF1O14727 1248 aa30.37■■■□□ 2.45
CHFR-222ENST00000544093 ZNF784Q8NCA9 323 aaPredicted RBP30.37■■■□□ 2.45
CHFR-222ENST00000544093 DALRD3Q5D0E6 543 aaKnown RBP30.36■■■□□ 2.45
CHFR-222ENST00000544093 DLEC1Q9Y238 1755 aa30.36■■■□□ 2.45
CHFR-222ENST00000544093 CNBD1Q8NA66 436 aa30.35■■■□□ 2.45
CHFR-222ENST00000544093 CFAP44Q96MT7 982 aa30.35■■■□□ 2.45
CHFR-222ENST00000544093 BRIP1Q9BX63 1249 aa30.35■■■□□ 2.45
CHFR-222ENST00000544093 ERVV-1B6SEH8 477 aa30.34■■■□□ 2.45
CHFR-222ENST00000544093 NPHP1O15259 732 aa30.34■■■□□ 2.45
CHFR-222ENST00000544093 CHRNA5P30532 468 aa30.34■■■□□ 2.45
CHFR-222ENST00000544093 KIF6Q6ZMV9 814 aa30.34■■■□□ 2.45
CHFR-222ENST00000544093 MRS2Q9HD23 443 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms