RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 COL26A1Q96A83 441 aa6.23□□□□□ -1.41
SCFD1-207ENST00000544052 KIFC2Q96AC6 838 aa6.23□□□□□ -1.41
SCFD1-207ENST00000544052 SNRPBP14678 240 aaKnown RBP6.22□□□□□ -1.41
SCFD1-207ENST00000544052 MAPK1P28482 360 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 MTFR1Q15390 333 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 SH3PXD2AQ5TCZ1 1133 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 HELQQ8TDG4 1101 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 VTI1AQ96AJ9 217 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 AGBL1Q96MI9 1066 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 C2orf49Q9BVC5 232 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-207ENST00000544052 WASF2Q9Y6W5 498 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 RBM47A0AV96 593 aaKnown RBP6.22□□□□□ -1.41
SCFD1-207ENST00000544052 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
SCFD1-207ENST00000544052 TLR1Q15399 786 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 NPAS4Q8IUM7 802 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 XAGE2Q96GT9 111 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 KLF16Q9BXK1 252 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-207ENST00000544052 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
SCFD1-207ENST00000544052 IQSEC3Q9UPP2 1182 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-207ENST00000544052 ADH1AP07327 375 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 ERCC3P19447 782 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 MPSTP25325 297 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 TRIM52Q96A61 297 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 ESYT1Q9BSJ8 1104 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 BCL2L13Q9BXK5 485 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 HRH3Q9Y5N1 445 aa6.21□□□□□ -1.41
SCFD1-207ENST00000544052 WIPF1O43516 503 aa6.21□□□□□ -1.42
SCFD1-207ENST00000544052 ZIC2O95409 532 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-207ENST00000544052 TAGLNQ01995 201 aaKnown RBP6.21□□□□□ -1.42
SCFD1-207ENST00000544052 COX20Q5RI15 118 aa6.21□□□□□ -1.42
SCFD1-207ENST00000544052 C16orf46Q6P387 395 aa6.21□□□□□ -1.42
SCFD1-207ENST00000544052 ZNF395Q9H8N7 513 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-207ENST00000544052 DCTN4Q9UJW0 460 aa6.21□□□□□ -1.42
SCFD1-207ENST00000544052 LRFN2Q9ULH4 789 aa6.21□□□□□ -1.42
SCFD1-207ENST00000544052 TERTO14746 1132 aaKnown RBP6.2□□□□□ -1.42
SCFD1-207ENST00000544052 ZNF16P17020 682 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-207ENST00000544052 PSMA6P60900 246 aaKnown RBP6.2□□□□□ -1.42
SCFD1-207ENST00000544052 RELBQ01201 579 aa6.2□□□□□ -1.42
SCFD1-207ENST00000544052 CLN3Q13286 438 aa6.2□□□□□ -1.42
SCFD1-207ENST00000544052 Q6ZVU0 165 aa6.2□□□□□ -1.42
SCFD1-207ENST00000544052 QTRT2Q9H974 415 aaKnown RBP6.2□□□□□ -1.42
SCFD1-207ENST00000544052 PARP3Q9Y6F1 533 aa6.2□□□□□ -1.42
SCFD1-207ENST00000544052 WDR4P57081 412 aaKnown RBP6.19□□□□□ -1.42
SCFD1-207ENST00000544052 CENPCQ03188 943 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 FAM26DQ5JW98 314 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 GIPC2Q8TF65 315 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 MEN1O00255 615 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 CDK2AP1O14519 115 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 NPR3P17342 541 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 INSM1Q01101 510 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-207ENST00000544052 NGLY1Q96IV0 654 aa6.19□□□□□ -1.42
SCFD1-207ENST00000544052 KIAA1522Q9P206 1035 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-207ENST00000544052 TNFRSF10BO14763 440 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 ZBTB39O15060 712 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 FAM13AO94988 1023 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 PTGIRP43119 386 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 ZNF295-AS1Q8N0V1 137 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 ZDHHC1Q8WTX9 485 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 MRRFQ96E11 262 aaKnown RBP6.18□□□□□ -1.42
SCFD1-207ENST00000544052 ASB16Q96NS5 453 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 FHDC1Q9C0D6 1143 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-207ENST00000544052 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 HCN4Q9Y3Q4 1203 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 EML1O00423 815 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 TIMP2P16035 220 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 EIF1AXP47813 144 aaKnown RBP6.18□□□□□ -1.42
SCFD1-207ENST00000544052 STAG2Q8N3U4 1231 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 CCDC87Q9NVE4 849 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 CABP1Q9NZU7 370 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 ZNF232Q9UNY5 417 aa6.18□□□□□ -1.42
SCFD1-207ENST00000544052 SERTM1A2A2V5 107 aa6.17□□□□□ -1.42
SCFD1-207ENST00000544052 NOS2P35228 1153 aa6.17□□□□□ -1.42
SCFD1-207ENST00000544052 L3MBTL2Q969R5 705 aa6.17□□□□□ -1.42
SCFD1-207ENST00000544052 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.17□□□□□ -1.423e-6■■■■■ 28.8
SCFD1-207ENST00000544052 STIM2Q9P246 746 aa6.17□□□□□ -1.42
SCFD1-207ENST00000544052 CAPN5O15484 640 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-207ENST00000544052 AAMPQ13685 434 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 POTEAQ6S8J7 498 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 TMC7Q7Z402 723 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 ATCAYQ86WG3 371 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 ALDH16A1Q8IZ83 802 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 NLRP3Q96P20 1036 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 FBXO33Q7Z6M2 555 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 ZSCAN29Q8IWY8 852 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-207ENST00000544052 CHMP3Q9Y3E7 222 aa6.16□□□□□ -1.42
SCFD1-207ENST00000544052 FZD6O60353 706 aa6.15□□□□□ -1.42
SCFD1-207ENST00000544052 TEAD4Q15561 434 aa6.15□□□□□ -1.42
SCFD1-207ENST00000544052 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.42
SCFD1-207ENST00000544052 RGL4Q8IZJ4 473 aa6.15□□□□□ -1.42
SCFD1-207ENST00000544052 ZSCAN10Q96SZ4 725 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-207ENST00000544052 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 SLC16A10Q8TF71 515 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 MYO19Q96H55 970 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 KLK14Q9P0G3 267 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 BRPF3Q9ULD4 1205 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 BMP1P13497 986 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 DGKZQ13574 1117 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 TMEM214Q6NUQ4 689 aaKnown RBP6.14□□□□□ -1.43
SCFD1-207ENST00000544052 TRIM46Q7Z4K8 759 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 ETFBKMTQ8IXQ9 262 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms