RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 TEX13AQ9BXU3 409 aaPredicted RBP25.26■■□□□ 1.63
SPPL3-208ENST00000543854 COL15A1P39059 1388 aa25.26■■□□□ 1.63
SPPL3-208ENST00000543854 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
SPPL3-208ENST00000543854 SRP68Q9UHB9 627 aaKnown RBP25.24■■□□□ 1.63
SPPL3-208ENST00000543854 KCNQ3O43525 872 aa25.23■■□□□ 1.63
SPPL3-208ENST00000543854 ZPR1O75312 459 aa25.22■■□□□ 1.63
SPPL3-208ENST00000543854 CANXP27824 592 aaKnown RBP25.22■■□□□ 1.63
SPPL3-208ENST00000543854 TAF7Q15545 349 aaPredicted RBP25.22■■□□□ 1.63
SPPL3-208ENST00000543854 GPR162Q16538 588 aa25.22■■□□□ 1.63
SPPL3-208ENST00000543854 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
SPPL3-208ENST00000543854 KDM3BQ7LBC6 1761 aa25.22■■□□□ 1.63
SPPL3-208ENST00000543854 KIF13BQ9NQT8 1826 aa25.21■■□□□ 1.63
SPPL3-208ENST00000543854 PNISRQ8TF01 805 aaKnown RBP25.2■■□□□ 1.62
SPPL3-208ENST00000543854 PARP3Q9Y6F1 533 aa25.2■■□□□ 1.62
SPPL3-208ENST00000543854 FKBP8Q14318 412 aa25.19■■□□□ 1.62
SPPL3-208ENST00000543854 SCN7AQ01118 1682 aa25.19■■□□□ 1.62
SPPL3-208ENST00000543854 C10orf71Q711Q0 1435 aa25.19■■□□□ 1.62
SPPL3-208ENST00000543854 LAMB4A4D0S4 1761 aa25.18■■□□□ 1.62
SPPL3-208ENST00000543854 LMOD3Q0VAK6 560 aa25.18■■□□□ 1.62
SPPL3-208ENST00000543854 USPL1Q5W0Q7 1092 aa25.18■■□□□ 1.62
SPPL3-208ENST00000543854 CCDC146Q8IYE0 955 aa25.18■■□□□ 1.62
SPPL3-208ENST00000543854 THUMPD2Q9BTF0 503 aaKnown RBP25.18■■□□□ 1.62
SPPL3-208ENST00000543854 NARFQ9UHQ1 456 aa25.18■■□□□ 1.62
SPPL3-208ENST00000543854 SNRPA1P09661 255 aaKnown RBP25.17■■□□□ 1.62
SPPL3-208ENST00000543854 YY1P25490 414 aa25.17■■□□□ 1.62
SPPL3-208ENST00000543854 RIPK4P57078 832 aa25.17■■□□□ 1.62
SPPL3-208ENST00000543854 A0A087WZG4 1122 aa25.16■■□□□ 1.62
SPPL3-208ENST00000543854 TMPOP42166 694 aaKnown RBP25.16■■□□□ 1.62
SPPL3-208ENST00000543854 EIF5P55010 431 aaKnown RBP25.16■■□□□ 1.62
SPPL3-208ENST00000543854 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
SPPL3-208ENST00000543854 IL6STP40189 918 aaPredicted RBP25.15■■□□□ 1.62
SPPL3-208ENST00000543854 RUNDC1Q96C34 613 aa25.15■■□□□ 1.62
SPPL3-208ENST00000543854 MIS18AQ9NYP9 233 aa25.15■■□□□ 1.62
SPPL3-208ENST00000543854 CHD4Q14839 1912 aa25.15■■□□□ 1.62
SPPL3-208ENST00000543854 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.62
SPPL3-208ENST00000543854 ADAMTS8Q9UP79 889 aa25.14■■□□□ 1.62
SPPL3-208ENST00000543854 KIAA1551Q9HCM1 1747 aa25.13■■□□□ 1.61
SPPL3-208ENST00000543854 PRAMEF22A3QJZ6 481 aa25.13■■□□□ 1.61
SPPL3-208ENST00000543854 A1BGP04217 495 aa25.13■■□□□ 1.61
SPPL3-208ENST00000543854 DDR1Q08345 913 aa25.13■■□□□ 1.61
SPPL3-208ENST00000543854 PXDNLA1KZ92 1463 aa25.13■■□□□ 1.61
SPPL3-208ENST00000543854 YBX3P16989 372 aaKnown RBP eCLIP25.12■■□□□ 1.61
SPPL3-208ENST00000543854 RRP7AQ9Y3A4 280 aaKnown RBP25.12■■□□□ 1.61
SPPL3-208ENST00000543854 USP16Q9Y5T5 823 aa25.12■■□□□ 1.61
SPPL3-208ENST00000543854 BCORQ6W2J9 1755 aa25.1■■□□□ 1.61
SPPL3-208ENST00000543854 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
SPPL3-208ENST00000543854 GRIN3BO60391 1043 aa25.1■■□□□ 1.61
SPPL3-208ENST00000543854 BCL2L12Q9HB09 334 aa25.1■■□□□ 1.61
SPPL3-208ENST00000543854 N4BP2Q86UW6 1770 aaPredicted RBP25.1■■□□□ 1.61
SPPL3-208ENST00000543854 TM4SF1P30408 202 aa25.09■■□□□ 1.61
SPPL3-208ENST00000543854 TGFB2P61812 414 aa25.09■■□□□ 1.61
SPPL3-208ENST00000543854 NEUROD2Q15784 382 aa25.09■■□□□ 1.61
SPPL3-208ENST00000543854 TSPYL4Q9UJ04 414 aa25.09■■□□□ 1.61
SPPL3-208ENST00000543854 NFIXQ14938 502 aa25.08■■□□□ 1.61
SPPL3-208ENST00000543854 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
SPPL3-208ENST00000543854 NRXN2Q9P2S2 1712 aa25.07■■□□□ 1.6
SPPL3-208ENST00000543854 ANP32CO43423 234 aa25.07■■□□□ 1.6
SPPL3-208ENST00000543854 PIP4K2AP48426 406 aaPredicted RBP25.07■■□□□ 1.6
SPPL3-208ENST00000543854 EIF4A1P60842 406 aaKnown RBP25.07■■□□□ 1.6
SPPL3-208ENST00000543854 TBC1D2BQ9UPU7 963 aa25.07■■□□□ 1.6
SPPL3-208ENST00000543854 WWC3Q9ULE0 1092 aa25.06■■□□□ 1.6
SPPL3-208ENST00000543854 GIGYF1O75420 1035 aaPredicted RBP25.05■■□□□ 1.6
SPPL3-208ENST00000543854 DZIP3Q86Y13 1208 aaKnown RBP25.05■■□□□ 1.6
SPPL3-208ENST00000543854 BABAM1Q9NWV8 329 aa25.05■■□□□ 1.6
SPPL3-208ENST00000543854 BRCA1P38398 1863 aaKnown RBP25.04■■□□□ 1.6
SPPL3-208ENST00000543854 CAMTA2O94983 1202 aa25.03■■□□□ 1.6
SPPL3-208ENST00000543854 BICDL1Q6ZP65 573 aa25.03■■□□□ 1.6
SPPL3-208ENST00000543854 A0A0G2JLW4 131 aa25.02■■□□□ 1.6
SPPL3-208ENST00000543854 NBPF26B4DH59 902 aa25.02■■□□□ 1.6
SPPL3-208ENST00000543854 TBC1D9BQ66K14 1250 aa25.02■■□□□ 1.6
SPPL3-208ENST00000543854 NBPF10Q6P3W6 841 aaKnown RBP25.02■■□□□ 1.6
SPPL3-208ENST00000543854 NBPF15Q8N660 670 aa25.02■■□□□ 1.6
SPPL3-208ENST00000543854 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
SPPL3-208ENST00000543854 CARMIL3Q8ND23 1372 aa25.02■■□□□ 1.6
SPPL3-208ENST00000543854 SERPINB2P05120 415 aa25.01■■□□□ 1.59
SPPL3-208ENST00000543854 DPEP1P16444 411 aa25.01■■□□□ 1.59
SPPL3-208ENST00000543854 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
SPPL3-208ENST00000543854 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
SPPL3-208ENST00000543854 APAF1O14727 1248 aa24.98■■□□□ 1.59
SPPL3-208ENST00000543854 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
SPPL3-208ENST00000543854 BCS1LQ9Y276 419 aa24.98■■□□□ 1.59
SPPL3-208ENST00000543854 LAS1LQ9Y4W2 734 aaKnown RBP24.97■■□□□ 1.59
SPPL3-208ENST00000543854 DLEC1Q9Y238 1755 aa24.96■■□□□ 1.59
SPPL3-208ENST00000543854 ERBB4Q15303 1308 aa24.96■■□□□ 1.59
SPPL3-208ENST00000543854 RGL2O15211 777 aa24.96■■□□□ 1.59
SPPL3-208ENST00000543854 SETDB2Q96T68 719 aa24.96■■□□□ 1.59
SPPL3-208ENST00000543854 CHL1O00533 1208 aa24.95■■□□□ 1.58
SPPL3-208ENST00000543854 CLEC4GQ6UXB4 293 aa24.95■■□□□ 1.58
SPPL3-208ENST00000543854 PIM2Q9P1W9 311 aa24.95■■□□□ 1.58
SPPL3-208ENST00000543854 ARFGEF1Q9Y6D6 1849 aa24.95■■□□□ 1.58
SPPL3-208ENST00000543854 NPHP1O15259 732 aa24.94■■□□□ 1.58
SPPL3-208ENST00000543854 CHRNA5P30532 468 aa24.94■■□□□ 1.58
SPPL3-208ENST00000543854 MYL6BP14649 208 aa24.93■■□□□ 1.58
SPPL3-208ENST00000543854 KCNA3P22001 575 aa24.93■■□□□ 1.58
SPPL3-208ENST00000543854 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
SPPL3-208ENST00000543854 NGEFQ8N5V2 710 aa24.93■■□□□ 1.58
SPPL3-208ENST00000543854 CNBD1Q8NA66 436 aa24.93■■□□□ 1.58
SPPL3-208ENST00000543854 ANKRD31Q8N7Z5 1873 aa24.93■■□□□ 1.58
SPPL3-208ENST00000543854 DALRD3Q5D0E6 543 aaKnown RBP24.92■■□□□ 1.58
SPPL3-208ENST00000543854 KIF6Q6ZMV9 814 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms