RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
CD4-211ENST00000543755 CA12O43570 354 aa12.37□□□□□ -0.43
CD4-211ENST00000543755 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
CD4-211ENST00000543755 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
CD4-211ENST00000543755 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
CD4-211ENST00000543755 H0YIN7 160 aa12.36□□□□□ -0.43
CD4-211ENST00000543755 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
CD4-211ENST00000543755 USP42Q9H9J4 1324 aaKnown RBP12.36□□□□□ -0.43
CD4-211ENST00000543755 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
CD4-211ENST00000543755 ZPR1O75312 459 aa12.35□□□□□ -0.43
CD4-211ENST00000543755 FBLN1P23142 703 aa12.35□□□□□ -0.43
CD4-211ENST00000543755 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
CD4-211ENST00000543755 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
CD4-211ENST00000543755 THSD7BQ9C0I4 1608 aa12.35□□□□□ -0.43
CD4-211ENST00000543755 CCDC88AQ3V6T2 1871 aa12.35□□□□□ -0.43
CD4-211ENST00000543755 A0A1W2PP64 1363 aa12.34□□□□□ -0.43
CD4-211ENST00000543755 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
CD4-211ENST00000543755 TAOK3Q9H2K8 898 aa12.34□□□□□ -0.43
CD4-211ENST00000543755 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
CD4-211ENST00000543755 KDRP35968 1356 aa12.33□□□□□ -0.44
CD4-211ENST00000543755 C21orf2O43822 256 aa12.33□□□□□ -0.44
CD4-211ENST00000543755 MAP2K2P36507 400 aa12.33□□□□□ -0.44
CD4-211ENST00000543755 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
CD4-211ENST00000543755 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
CD4-211ENST00000543755 ROCK2O75116 1388 aaKnown RBP12.32□□□□□ -0.44
CD4-211ENST00000543755 TM4SF1P30408 202 aa12.32□□□□□ -0.44
CD4-211ENST00000543755 EPHX2P34913 555 aa12.32□□□□□ -0.44
CD4-211ENST00000543755 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
CD4-211ENST00000543755 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
CD4-211ENST00000543755 INSRP06213 1382 aa12.31□□□□□ -0.44
CD4-211ENST00000543755 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
CD4-211ENST00000543755 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
CD4-211ENST00000543755 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.44
CD4-211ENST00000543755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
CD4-211ENST00000543755 CASP8AP2Q9UKL3 1982 aa12.3□□□□□ -0.44
CD4-211ENST00000543755 SCN4AP35499 1836 aa12.3□□□□□ -0.44
CD4-211ENST00000543755 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
CD4-211ENST00000543755 HSP90AB2PQ58FF8 381 aa12.3□□□□□ -0.44
CD4-211ENST00000543755 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
CD4-211ENST00000543755 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
CD4-211ENST00000543755 LTBP3Q9NS15 1303 aa12.3□□□□□ -0.44
CD4-211ENST00000543755 PHKG2P15735 406 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
CD4-211ENST00000543755 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 RNF123Q5XPI4 1314 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 FLT4P35916 1363 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
CD4-211ENST00000543755 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
CD4-211ENST00000543755 SERPINB2P05120 415 aa12.28□□□□□ -0.44
CD4-211ENST00000543755 TLL2Q9Y6L7 1015 aa12.28□□□□□ -0.44
CD4-211ENST00000543755 DICER1Q9UPY3 1922 aaKnown RBP12.28□□□□□ -0.44
CD4-211ENST00000543755 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
CD4-211ENST00000543755 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.45
CD4-211ENST00000543755 NFIXQ14938 502 aa12.27□□□□□ -0.45
CD4-211ENST00000543755 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.45
CD4-211ENST00000543755 DLEC1Q9Y238 1755 aa12.27□□□□□ -0.45
CD4-211ENST00000543755 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.45
CD4-211ENST00000543755 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
CD4-211ENST00000543755 PDE6BP35913 854 aa12.26□□□□□ -0.45
CD4-211ENST00000543755 TRAF5O00463 557 aa12.25□□□□□ -0.45
CD4-211ENST00000543755 CABP4P57796 275 aa12.25□□□□□ -0.45
CD4-211ENST00000543755 CST9Q5W186 159 aa12.25□□□□□ -0.45
CD4-211ENST00000543755 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
CD4-211ENST00000543755 ADAMTSL1Q8N6G6 1762 aa12.25□□□□□ -0.45
CD4-211ENST00000543755 CNKSR1Q969H4 720 aa12.24□□□□□ -0.45
CD4-211ENST00000543755 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
CD4-211ENST00000543755 CARMIL3Q8ND23 1372 aa12.23□□□□□ -0.45
CD4-211ENST00000543755 NPHP1O15259 732 aa12.23□□□□□ -0.45
CD4-211ENST00000543755 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
CD4-211ENST00000543755 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
CD4-211ENST00000543755 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
CD4-211ENST00000543755 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
CD4-211ENST00000543755 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
CD4-211ENST00000543755 FER1L6Q2WGJ9 1857 aa12.23□□□□□ -0.45
CD4-211ENST00000543755 TONSLQ96HA7 1378 aa12.22□□□□□ -0.45
CD4-211ENST00000543755 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
CD4-211ENST00000543755 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
CD4-211ENST00000543755 AFDNP55196 1824 aaKnown RBP12.21□□□□□ -0.45
CD4-211ENST00000543755 CTU1Q7Z7A3 348 aaKnown RBP12.21□□□□□ -0.45
CD4-211ENST00000543755 SAPCD2Q86UD0 394 aa12.21□□□□□ -0.45
CD4-211ENST00000543755 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
CD4-211ENST00000543755 FYB1O15117 783 aa12.2□□□□□ -0.46
CD4-211ENST00000543755 CELF2O95319 508 aaKnown RBP12.2□□□□□ -0.46
CD4-211ENST00000543755 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
CD4-211ENST00000543755 ZIC5Q96T25 663 aa12.2□□□□□ -0.46
CD4-211ENST00000543755 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
CD4-211ENST00000543755 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
CD4-211ENST00000543755 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
CD4-211ENST00000543755 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
CD4-211ENST00000543755 GPC2Q8N158 579 aa12.19□□□□□ -0.46
CD4-211ENST00000543755 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
CD4-211ENST00000543755 NCAPD2Q15021 1401 aa12.19□□□□□ -0.46
CD4-211ENST00000543755 COL15A1P39059 1388 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 NOGQ13253 232 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 CCDC24Q8N4L8 307 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 HHIPL1Q96JK4 782 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 EYA1Q99502 592 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms