RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 FKBP8Q14318 412 aa18.95■□□□□ 0.62
VPS37B-204ENST00000543590 ZPR1O75312 459 aa18.94■□□□□ 0.62
VPS37B-204ENST00000543590 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
VPS37B-204ENST00000543590 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
VPS37B-204ENST00000543590 COL15A1P39059 1388 aa18.93■□□□□ 0.62
VPS37B-204ENST00000543590 NFE2L2Q16236 605 aa18.93■□□□□ 0.62
VPS37B-204ENST00000543590 USPL1Q5W0Q7 1092 aa18.93■□□□□ 0.62
VPS37B-204ENST00000543590 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
VPS37B-204ENST00000543590 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
VPS37B-204ENST00000543590 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
VPS37B-204ENST00000543590 NARFQ9UHQ1 456 aa18.92■□□□□ 0.62
VPS37B-204ENST00000543590 CHD4Q14839 1912 aa18.91■□□□□ 0.62
VPS37B-204ENST00000543590 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
VPS37B-204ENST00000543590 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
VPS37B-204ENST00000543590 DDR1Q08345 913 aa18.9■□□□□ 0.62
VPS37B-204ENST00000543590 C10orf71Q711Q0 1435 aa18.9■□□□□ 0.62
VPS37B-204ENST00000543590 A1BGP04217 495 aa18.9■□□□□ 0.62
VPS37B-204ENST00000543590 TM4SF1P30408 202 aa18.9■□□□□ 0.62
VPS37B-204ENST00000543590 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
VPS37B-204ENST00000543590 KIF13BQ9NQT8 1826 aa18.89■□□□□ 0.61
VPS37B-204ENST00000543590 TGFB2P61812 414 aa18.89■□□□□ 0.61
VPS37B-204ENST00000543590 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.61
VPS37B-204ENST00000543590 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
VPS37B-204ENST00000543590 USP16Q9Y5T5 823 aa18.89■□□□□ 0.61
VPS37B-204ENST00000543590 A0A087WZG4 1122 aa18.88■□□□□ 0.61
VPS37B-204ENST00000543590 SNRPA1P09661 255 aaKnown RBP18.88■□□□□ 0.61
VPS37B-204ENST00000543590 THUMPD2Q9BTF0 503 aaKnown RBP18.88■□□□□ 0.61
VPS37B-204ENST00000543590 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
VPS37B-204ENST00000543590 PXDNLA1KZ92 1463 aa18.87■□□□□ 0.61
VPS37B-204ENST00000543590 PRAMEF22A3QJZ6 481 aa18.87■□□□□ 0.61
VPS37B-204ENST00000543590 POLRMTO00411 1230 aaKnown RBP18.87■□□□□ 0.61
VPS37B-204ENST00000543590 IL6STP40189 918 aaPredicted RBP18.87■□□□□ 0.61
VPS37B-204ENST00000543590 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
VPS37B-204ENST00000543590 A0A0G2JLW4 131 aa18.86■□□□□ 0.61
VPS37B-204ENST00000543590 NFIXQ14938 502 aa18.86■□□□□ 0.61
VPS37B-204ENST00000543590 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
VPS37B-204ENST00000543590 KIAA1551Q9HCM1 1747 aa18.85■□□□□ 0.61
VPS37B-204ENST00000543590 DPEP1P16444 411 aa18.84■□□□□ 0.61
VPS37B-204ENST00000543590 RIPK4P57078 832 aa18.84■□□□□ 0.61
VPS37B-204ENST00000543590 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
VPS37B-204ENST00000543590 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
VPS37B-204ENST00000543590 TBC1D2BQ9UPU7 963 aa18.84■□□□□ 0.61
VPS37B-204ENST00000543590 N4BP2Q86UW6 1770 aaPredicted RBP18.84■□□□□ 0.61
VPS37B-204ENST00000543590 TMPOP42166 694 aaKnown RBP18.84■□□□□ 0.61
VPS37B-204ENST00000543590 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
VPS37B-204ENST00000543590 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
VPS37B-204ENST00000543590 PIP4K2AP48426 406 aaPredicted RBP18.83■□□□□ 0.6
VPS37B-204ENST00000543590 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
VPS37B-204ENST00000543590 SERPINB2P05120 415 aa18.81■□□□□ 0.6
VPS37B-204ENST00000543590 KCNA3P22001 575 aa18.81■□□□□ 0.6
VPS37B-204ENST00000543590 EIF4A1P60842 406 aaKnown RBP18.81■□□□□ 0.6
VPS37B-204ENST00000543590 BICDL1Q6ZP65 573 aa18.81■□□□□ 0.6
VPS37B-204ENST00000543590 RUNDC1Q96C34 613 aa18.81■□□□□ 0.6
VPS37B-204ENST00000543590 RRP7AQ9Y3A4 280 aaKnown RBP18.81■□□□□ 0.6
VPS37B-204ENST00000543590 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
VPS37B-204ENST00000543590 NBPF26B4DH59 902 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 CAMTA2O94983 1202 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 TBC1D9BQ66K14 1250 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 NBPF10Q6P3W6 841 aaKnown RBP18.8■□□□□ 0.6
VPS37B-204ENST00000543590 DZIP3Q86Y13 1208 aaKnown RBP18.8■□□□□ 0.6
VPS37B-204ENST00000543590 NBPF15Q8N660 670 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 UTRNP46939 3433 aa18.8■□□□□ 0.6
VPS37B-204ENST00000543590 GIGYF1O75420 1035 aaPredicted RBP18.79■□□□□ 0.6
VPS37B-204ENST00000543590 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
VPS37B-204ENST00000543590 SCN7AQ01118 1682 aa18.79■□□□□ 0.6
VPS37B-204ENST00000543590 NRXN2Q9P2S2 1712 aa18.78■□□□□ 0.6
VPS37B-204ENST00000543590 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
VPS37B-204ENST00000543590 NEUROD2Q15784 382 aa18.78■□□□□ 0.6
VPS37B-204ENST00000543590 CHRNA5P30532 468 aa18.77■□□□□ 0.6
VPS37B-204ENST00000543590 PIM2Q9P1W9 311 aa18.77■□□□□ 0.6
VPS37B-204ENST00000543590 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
VPS37B-204ENST00000543590 GOLGB1Q14789 3259 aaKnown RBP18.76■□□□□ 0.59
VPS37B-204ENST00000543590 BRCA1P38398 1863 aaKnown RBP18.76■□□□□ 0.59
VPS37B-204ENST00000543590 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
VPS37B-204ENST00000543590 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
VPS37B-204ENST00000543590 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
VPS37B-204ENST00000543590 TRIM35Q9UPQ4 493 aa18.75■□□□□ 0.59
VPS37B-204ENST00000543590 CARMIL3Q8ND23 1372 aa18.75■□□□□ 0.59
VPS37B-204ENST00000543590 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
VPS37B-204ENST00000543590 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
VPS37B-204ENST00000543590 BCORQ6W2J9 1755 aa18.74■□□□□ 0.59
VPS37B-204ENST00000543590 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
VPS37B-204ENST00000543590 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
VPS37B-204ENST00000543590 PRR5LQ6MZQ0 368 aa18.72■□□□□ 0.59
VPS37B-204ENST00000543590 RGL2O15211 777 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 NGEFQ8N5V2 710 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 CHL1O00533 1208 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 C2CD5Q86YS7 1000 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 BRIP1Q9BX63 1249 aa18.71■□□□□ 0.59
VPS37B-204ENST00000543590 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
VPS37B-204ENST00000543590 ATP10DQ9P241 1426 aa18.7■□□□□ 0.58
VPS37B-204ENST00000543590 ADCY9O60503 1353 aa18.7■□□□□ 0.58
VPS37B-204ENST00000543590 H0YIN7 160 aa18.7■□□□□ 0.58
VPS37B-204ENST00000543590 MYL6BP14649 208 aa18.7■□□□□ 0.58
VPS37B-204ENST00000543590 CNBD1Q8NA66 436 aa18.7■□□□□ 0.58
VPS37B-204ENST00000543590 APAF1O14727 1248 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms