RNA–Protein interactions for RNA: ENST00000543375.5

CADM1-215, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 668 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-215ENST00000543375 DDX21Q9NR30 783 aaKnown RBP eCLIP17.63■□□□□ 0.41
CADM1-215ENST00000543375 MYH14Q7Z406 1995 aaKnown RBP17.62■□□□□ 0.41
CADM1-215ENST00000543375 CUL9Q8IWT3 2517 aa17.62■□□□□ 0.41
CADM1-215ENST00000543375 ADAMTSL1Q8N6G6 1762 aa17.62■□□□□ 0.41
CADM1-215ENST00000543375 FXR1P51114 621 aaKnown RBP eCLIP17.62■□□□□ 0.41
CADM1-215ENST00000543375 L3MBTL3Q96JM7 780 aaPredicted RBP17.62■□□□□ 0.41
CADM1-215ENST00000543375 SBNO2Q9Y2G9 1366 aa17.62■□□□□ 0.41
CADM1-215ENST00000543375 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
CADM1-215ENST00000543375 ATG3Q9NT62 314 aa17.61■□□□□ 0.41
CADM1-215ENST00000543375 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
CADM1-215ENST00000543375 A0A0C4DFX4 3053 aa17.6■□□□□ 0.41
CADM1-215ENST00000543375 FBLN1P23142 703 aa17.6■□□□□ 0.41
CADM1-215ENST00000543375 EPHX2P34913 555 aa17.6■□□□□ 0.41
CADM1-215ENST00000543375 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
CADM1-215ENST00000543375 HACL1Q9UJ83 578 aa17.6■□□□□ 0.41
CADM1-215ENST00000543375 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
CADM1-215ENST00000543375 CNTNAP4Q9C0A0 1308 aa17.59■□□□□ 0.41
CADM1-215ENST00000543375 C21orf2O43822 256 aa17.59■□□□□ 0.41
CADM1-215ENST00000543375 TM4SF1P30408 202 aa17.59■□□□□ 0.41
CADM1-215ENST00000543375 FMR1Q06787 632 aaKnown RBP eCLIP17.59■□□□□ 0.41
CADM1-215ENST00000543375 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
CADM1-215ENST00000543375 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
CADM1-215ENST00000543375 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
CADM1-215ENST00000543375 H0YIN7 160 aa17.58■□□□□ 0.4
CADM1-215ENST00000543375 PNMA8AQ86V59 439 aaPredicted RBP17.58■□□□□ 0.4
CADM1-215ENST00000543375 SMG6Q86US8 1419 aaKnown RBP17.57■□□□□ 0.4
CADM1-215ENST00000543375 TRPM7Q96QT4 1865 aa17.57■□□□□ 0.4
CADM1-215ENST00000543375 NKX1-1Q15270 411 aaPredicted RBP17.57■□□□□ 0.4
CADM1-215ENST00000543375 SLC17A8Q8NDX2 589 aa17.57■□□□□ 0.4
CADM1-215ENST00000543375 TAOK3Q9H2K8 898 aa17.57■□□□□ 0.4
CADM1-215ENST00000543375 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
CADM1-215ENST00000543375 KDRP35968 1356 aa17.55■□□□□ 0.4
CADM1-215ENST00000543375 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
CADM1-215ENST00000543375 TLL2Q9Y6L7 1015 aa17.55■□□□□ 0.4
CADM1-215ENST00000543375 CST9Q5W186 159 aa17.53■□□□□ 0.4
CADM1-215ENST00000543375 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.4
CADM1-215ENST00000543375 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
CADM1-215ENST00000543375 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
CADM1-215ENST00000543375 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.4
CADM1-215ENST00000543375 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.4
CADM1-215ENST00000543375 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
CADM1-215ENST00000543375 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
CADM1-215ENST00000543375 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
CADM1-215ENST00000543375 ADAMTS7Q9UKP4 1686 aa17.5■□□□□ 0.39
CADM1-215ENST00000543375 NRXN2Q9P2S2 1712 aa17.5■□□□□ 0.39
CADM1-215ENST00000543375 ZNF541Q9H0D2 1346 aa17.49■□□□□ 0.39
CADM1-215ENST00000543375 ZPR1O75312 459 aa17.49■□□□□ 0.39
CADM1-215ENST00000543375 SERPINB2P05120 415 aa17.49■□□□□ 0.39
CADM1-215ENST00000543375 USPL1Q5W0Q7 1092 aa17.49■□□□□ 0.39
CADM1-215ENST00000543375 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
CADM1-215ENST00000543375 TRAF5O00463 557 aa17.48■□□□□ 0.39
CADM1-215ENST00000543375 CRKLP46109 303 aaKnown RBP17.48■□□□□ 0.39
CADM1-215ENST00000543375 NFIXQ14938 502 aa17.48■□□□□ 0.39
CADM1-215ENST00000543375 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
CADM1-215ENST00000543375 COG3Q96JB2 828 aa17.48■□□□□ 0.39
CADM1-215ENST00000543375 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
CADM1-215ENST00000543375 SAPCD2Q86UD0 394 aa17.47■□□□□ 0.39
CADM1-215ENST00000543375 HPS5Q9UPZ3 1129 aa17.47■□□□□ 0.39
CADM1-215ENST00000543375 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
CADM1-215ENST00000543375 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
CADM1-215ENST00000543375 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
CADM1-215ENST00000543375 CTU1Q7Z7A3 348 aaKnown RBP17.45■□□□□ 0.38
CADM1-215ENST00000543375 ZIC5Q96T25 663 aa17.45■□□□□ 0.38
CADM1-215ENST00000543375 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
CADM1-215ENST00000543375 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
CADM1-215ENST00000543375 MKI67P46013 3256 aaKnown RBP17.44■□□□□ 0.38
CADM1-215ENST00000543375 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
CADM1-215ENST00000543375 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
CADM1-215ENST00000543375 IFNL2Q8IZJ0 200 aa17.42■□□□□ 0.38
CADM1-215ENST00000543375 PHKG2P15735 406 aa17.41■□□□□ 0.38
CADM1-215ENST00000543375 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
CADM1-215ENST00000543375 HHIPL1Q96JK4 782 aa17.41■□□□□ 0.38
CADM1-215ENST00000543375 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
CADM1-215ENST00000543375 TRIOBPQ9H2D6 2365 aa17.4■□□□□ 0.38
CADM1-215ENST00000543375 PTCD1O75127 700 aaKnown RBP17.4■□□□□ 0.38
CADM1-215ENST00000543375 CELF2O95319 508 aaKnown RBP17.4■□□□□ 0.38
CADM1-215ENST00000543375 NOGQ13253 232 aa17.4■□□□□ 0.38
CADM1-215ENST00000543375 COL11A2P13942 1736 aaPredicted RBP17.4■□□□□ 0.38
CADM1-215ENST00000543375 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
CADM1-215ENST00000543375 AKAP11Q9UKA4 1901 aa17.39■□□□□ 0.37
CADM1-215ENST00000543375 PDE6BP35913 854 aa17.39■□□□□ 0.37
CADM1-215ENST00000543375 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
CADM1-215ENST00000543375 PITPNM2Q9BZ72 1349 aa17.39■□□□□ 0.37
CADM1-215ENST00000543375 COL6A3P12111 3177 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 TRPA1O75762 1119 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 INTS5Q6P9B9 1019 aaKnown RBP17.38■□□□□ 0.37
CADM1-215ENST00000543375 GPC2Q8N158 579 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
CADM1-215ENST00000543375 SAGE1Q9NXZ1 904 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 COLQQ9Y215 455 aaPredicted RBP17.38■□□□□ 0.37
CADM1-215ENST00000543375 INSRP06213 1382 aa17.38■□□□□ 0.37
CADM1-215ENST00000543375 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
CADM1-215ENST00000543375 CCDC24Q8N4L8 307 aa17.37■□□□□ 0.37
CADM1-215ENST00000543375 CNKSR1Q969H4 720 aa17.37■□□□□ 0.37
CADM1-215ENST00000543375 NARFQ9UHQ1 456 aa17.37■□□□□ 0.37
CADM1-215ENST00000543375 PRPF40BQ6NWY9 871 aaKnown RBP17.36■□□□□ 0.37
CADM1-215ENST00000543375 GJA3Q9Y6H8 435 aa17.36■□□□□ 0.37
CADM1-215ENST00000543375 ERVV-2B6SEH9 535 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms