RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
DDB1-221ENST00000543162 ATF7IPQ6VMQ6 1270 aa13.62□□□□□ -0.23
DDB1-221ENST00000543162 PTF1AQ7RTS3 328 aa13.62□□□□□ -0.23
DDB1-221ENST00000543162 ARHGAP45Q92619 1136 aa13.62□□□□□ -0.23
DDB1-221ENST00000543162 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
DDB1-221ENST00000543162 C20orf194Q5TEA3 1177 aa13.61□□□□□ -0.23
DDB1-221ENST00000543162 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
DDB1-221ENST00000543162 API5Q9BZZ5 524 aaKnown RBP13.61□□□□□ -0.23
DDB1-221ENST00000543162 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDB1-221ENST00000543162 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
DDB1-221ENST00000543162 PTPRCP08575 1304 aa13.61□□□□□ -0.23
DDB1-221ENST00000543162 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 TRIM37O94972 964 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 STARD3NLO95772 234 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 TRIM27P14373 513 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 SIK1P57059 783 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 FLIIQ13045 1269 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 G2E3Q7L622 706 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
DDB1-221ENST00000543162 DZIP1LQ8IYY4 767 aaKnown RBP13.6□□□□□ -0.23
DDB1-221ENST00000543162 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 SLC4A9Q96Q91 983 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
DDB1-221ENST00000543162 ANXA1P04083 346 aa13.59□□□□□ -0.23
DDB1-221ENST00000543162 ATP6V1AP38606 617 aa13.59□□□□□ -0.23
DDB1-221ENST00000543162 PDIA6Q15084 440 aa13.59□□□□□ -0.23
DDB1-221ENST00000543162 PROSER3Q2NL68 480 aa13.59□□□□□ -0.23
DDB1-221ENST00000543162 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
DDB1-221ENST00000543162 TNNQ9UQP3 1299 aa13.59□□□□□ -0.23
DDB1-221ENST00000543162 A1BGP04217 495 aa13.58□□□□□ -0.24
DDB1-221ENST00000543162 MYL6BP14649 208 aa13.58□□□□□ -0.24
DDB1-221ENST00000543162 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.24
DDB1-221ENST00000543162 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
DDB1-221ENST00000543162 TJP1Q07157 1748 aa13.58□□□□□ -0.24
DDB1-221ENST00000543162 CYP19A1P11511 503 aaPredicted RBP13.57□□□□□ -0.24
DDB1-221ENST00000543162 RLBP1P12271 317 aa13.57□□□□□ -0.24
DDB1-221ENST00000543162 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
DDB1-221ENST00000543162 CICQ96RK0 1608 aaPredicted RBP13.57□□□□□ -0.24
DDB1-221ENST00000543162 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
DDB1-221ENST00000543162 ITPK1Q13572 414 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 NBPF14Q5TI25 921 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
DDB1-221ENST00000543162 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
DDB1-221ENST00000543162 DDX58O95786 925 aaKnown RBP13.55□□□□□ -0.24
DDB1-221ENST00000543162 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
DDB1-221ENST00000543162 EXOC6Q8TAG9 804 aa13.55□□□□□ -0.24
DDB1-221ENST00000543162 XAGE3Q8WTP9 111 aa13.55□□□□□ -0.24
DDB1-221ENST00000543162 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
DDB1-221ENST00000543162 ABCC4O15439 1325 aa13.55□□□□□ -0.24
DDB1-221ENST00000543162 LY75O60449 1722 aa13.55□□□□□ -0.24
DDB1-221ENST00000543162 F6X3S4 739 aa13.54□□□□□ -0.24
DDB1-221ENST00000543162 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
DDB1-221ENST00000543162 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
DDB1-221ENST00000543162 LRP10Q7Z4F1 713 aa13.54□□□□□ -0.24
DDB1-221ENST00000543162 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
DDB1-221ENST00000543162 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
DDB1-221ENST00000543162 CCDC87Q9NVE4 849 aa13.54□□□□□ -0.24
DDB1-221ENST00000543162 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
DDB1-221ENST00000543162 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
DDB1-221ENST00000543162 KCNQ4P56696 695 aa13.53□□□□□ -0.24
DDB1-221ENST00000543162 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
DDB1-221ENST00000543162 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
DDB1-221ENST00000543162 APBA3O96018 575 aa13.52□□□□□ -0.25
DDB1-221ENST00000543162 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
DDB1-221ENST00000543162 INTS3Q68E01 1043 aaKnown RBP13.52□□□□□ -0.25
DDB1-221ENST00000543162 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
DDB1-221ENST00000543162 KSR2Q6VAB6 950 aa13.52□□□□□ -0.25
DDB1-221ENST00000543162 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
DDB1-221ENST00000543162 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
DDB1-221ENST00000543162 DNAAF4Q8WXU2 420 aa13.52□□□□□ -0.25
DDB1-221ENST00000543162 DDX19BQ9UMR2 479 aa13.52□□□□□ -0.25
DDB1-221ENST00000543162 ZBTB1Q9Y2K1 713 aa13.52□□□□□ -0.25
DDB1-221ENST00000543162 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
DDB1-221ENST00000543162 COL5A3P25940 1745 aaPredicted RBP13.52□□□□□ -0.25
DDB1-221ENST00000543162 ADCY9O60503 1353 aa13.51□□□□□ -0.25
DDB1-221ENST00000543162 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
DDB1-221ENST00000543162 SLC27A3Q5K4L6 730 aa13.51□□□□□ -0.25
DDB1-221ENST00000543162 ANKRD13DQ6ZTN6 518 aa13.51□□□□□ -0.25
DDB1-221ENST00000543162 RIC3Q7Z5B4 369 aa13.51□□□□□ -0.25
DDB1-221ENST00000543162 MAP3K2Q9Y2U5 619 aa13.51□□□□□ -0.25
DDB1-221ENST00000543162 RREB1Q92766 1687 aa13.5□□□□□ -0.25
DDB1-221ENST00000543162 PXDNLA1KZ92 1463 aa13.5□□□□□ -0.25
DDB1-221ENST00000543162 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
DDB1-221ENST00000543162 PLSCR1O15162 318 aa13.5□□□□□ -0.25
DDB1-221ENST00000543162 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
DDB1-221ENST00000543162 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
DDB1-221ENST00000543162 TTLL7Q6ZT98 887 aa13.5□□□□□ -0.25
DDB1-221ENST00000543162 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
DDB1-221ENST00000543162 CHMP4BQ9H444 224 aaKnown RBP13.5□□□□□ -0.25
DDB1-221ENST00000543162 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
DDB1-221ENST00000543162 MYH14Q7Z406 1995 aaKnown RBP13.49□□□□□ -0.25
DDB1-221ENST00000543162 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
DDB1-221ENST00000543162 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
DDB1-221ENST00000543162 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
DDB1-221ENST00000543162 ARXQ96QS3 562 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms