RNA–Protein interactions for RNA: ENST00000543134.5

SEC23IP-208, Transcript of SEC23 interacting protein, humanhuman

TSL 5 BASIC

Gene SEC23IP, Length 1,461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-208ENST00000543134 CT47B1P0C2W7 299 aaPredicted RBP9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 ZNF853P0CG23 659 aa9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 ZC3H6P61129 1189 aaKnown RBP9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 IRX6P78412 446 aaPredicted RBP9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 SLC15A2Q16348 729 aa9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 WDR70Q9NW82 654 aa9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 LMO7Q8WWI1 1683 aa9.4□□□□□ -0.91
SEC23IP-208ENST00000543134 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
SEC23IP-208ENST00000543134 VIRMAQ69YN4 1812 aaKnown RBP9.39□□□□□ -0.91
SEC23IP-208ENST00000543134 POLD1P28340 1107 aa9.39□□□□□ -0.91
SEC23IP-208ENST00000543134 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
SEC23IP-208ENST00000543134 PPP4R2Q9NY27 417 aa9.39□□□□□ -0.91
SEC23IP-208ENST00000543134 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
SEC23IP-208ENST00000543134 SBF2Q86WG5 1849 aa9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 CALD1Q05682 793 aaKnown RBP9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 NBPF6Q5VWK0 638 aa9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 NBPF4Q96M43 638 aa9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 CPDO75976 1380 aa9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 FAM208AQ9UK61 1670 aaKnown RBP9.38□□□□□ -0.91
SEC23IP-208ENST00000543134 FANCIQ9NVI1 1328 aa9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 DDB1Q16531 1140 aa9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 TXNRD1Q16881 649 aa9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 PIP4P2Q8N4L2 257 aa9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 IFT57Q9NWB7 429 aa9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
SEC23IP-208ENST00000543134 ZMYND10O75800 440 aa9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 MFAP1P55081 439 aaKnown RBP9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 GNAI1P63096 354 aa9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 MTHFSDQ2M296 383 aaKnown RBP9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 SGIP1Q9BQI5 828 aa9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 LRRC37A3O60309 1634 aa9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
SEC23IP-208ENST00000543134 PLIN1O60240 522 aa9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 BCAR3O75815 825 aa9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 APLP1P51693 650 aa9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 EXOSC9Q06265 439 aaKnown RBP9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 GAS2L2Q8NHY3 880 aa9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 TSR2Q969E8 191 aaKnown RBP9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 CRB1P82279 1406 aa9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 CACNA1FO60840 1977 aa9.35□□□□□ -0.91
SEC23IP-208ENST00000543134 CHL1O00533 1208 aa9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 ANKRD24Q8TF21 1146 aa9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 THUMPD2Q9BTF0 503 aaKnown RBP9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 ERBB3P21860 1342 aa9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 PDE3AQ14432 1141 aa9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 ZNF526Q8TF50 670 aaPredicted RBP9.34□□□□□ -0.91
SEC23IP-208ENST00000543134 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
SEC23IP-208ENST00000543134 PRELPP51888 382 aa9.33□□□□□ -0.92
SEC23IP-208ENST00000543134 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
SEC23IP-208ENST00000543134 C20orf194Q5TEA3 1177 aa9.33□□□□□ -0.92
SEC23IP-208ENST00000543134 EXOC6Q8TAG9 804 aa9.33□□□□□ -0.92
SEC23IP-208ENST00000543134 MBIPQ9NS73 344 aa9.33□□□□□ -0.92
SEC23IP-208ENST00000543134 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 GNAT3A8MTJ3 354 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 VAMP4O75379 141 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 ALDH1L2Q3SY69 923 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 MCM10Q7L590 875 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 USHBP1Q8N6Y0 703 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
SEC23IP-208ENST00000543134 SIPA1L3O60292 1781 aaPredicted RBP9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 AMOTQ4VCS5 1084 aa9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 TOM1L2Q6ZVM7 507 aa9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 IL17REQ8NFR9 667 aa9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 CRBNQ96SW2 442 aa9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
SEC23IP-208ENST00000543134 PKD1L3Q7Z443 1732 aa9.3□□□□□ -0.92
SEC23IP-208ENST00000543134 SCN11AQ9UI33 1791 aa9.3□□□□□ -0.92
SEC23IP-208ENST00000543134 PLEKHO1Q53GL0 409 aaPredicted RBP9.3□□□□□ -0.92
SEC23IP-208ENST00000543134 SSH1Q8WYL5 1049 aa9.3□□□□□ -0.92
SEC23IP-208ENST00000543134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.3□□□□□ -0.925e-7■■■□□ 16
SEC23IP-208ENST00000543134 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
SEC23IP-208ENST00000543134 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 PTF1AQ7RTS3 328 aa9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 TSPYL6Q8N831 410 aa9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 C8orf58Q8NAV2 365 aa9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 RTF1Q92541 710 aaKnown RBP9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 LAS1LQ9Y4W2 734 aaKnown RBP9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 BCL9O00512 1426 aa9.29□□□□□ -0.92
SEC23IP-208ENST00000543134 PYGBP11216 843 aa9.28□□□□□ -0.92
SEC23IP-208ENST00000543134 COL13A1Q5TAT6 717 aaPredicted RBP9.28□□□□□ -0.92
SEC23IP-208ENST00000543134 B4GALNT3Q6L9W6 998 aa9.28□□□□□ -0.92
SEC23IP-208ENST00000543134 NLGN2Q8NFZ4 835 aa9.28□□□□□ -0.92
SEC23IP-208ENST00000543134 KDM4CQ9H3R0 1056 aa9.28□□□□□ -0.92
SEC23IP-208ENST00000543134 STK25O00506 426 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms