RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 HEG1Q9ULI3 1381 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 C1orf167Q5SNV9 1468 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 TEFQ10587 303 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
PTPRO-208ENST00000542557 PHAXQ9H814 394 aaKnown RBP8.03□□□□□ -1.12
PTPRO-208ENST00000542557 LGR6Q9HBX8 967 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 CRYBG1Q9Y4K1 1723 aa8.03□□□□□ -1.12
PTPRO-208ENST00000542557 IL17RAQ96F46 866 aa8.02□□□□□ -1.12
PTPRO-208ENST00000542557 GOLGA6L3A6NEY3 463 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 RNMTO43148 476 aaKnown RBP8.02□□□□□ -1.13
PTPRO-208ENST00000542557 BEND3Q5T5X7 828 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 DNAAF4Q8WXU2 420 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 RBM33Q96EV2 1170 aaKnown RBP8.02□□□□□ -1.13
PTPRO-208ENST00000542557 ESYT1Q9BSJ8 1104 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 CWC22Q9HCG8 908 aaKnown RBP8.02□□□□□ -1.13
PTPRO-208ENST00000542557 BTBD11A6QL63 1104 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 ANAPC15P60006 121 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 NUCB2P80303 420 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 C1orf141Q5JVX7 400 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 LRRC59Q96AG4 307 aaKnown RBP8.02□□□□□ -1.13
PTPRO-208ENST00000542557 ORAI2Q96SN7 254 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 CHPF2Q9P2E5 772 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 ADCY9O60503 1353 aa8.02□□□□□ -1.13
PTPRO-208ENST00000542557 DCCP43146 1447 aa8.01□□□□□ -1.13
PTPRO-208ENST00000542557 HSP90B1P14625 803 aaKnown RBP8.01□□□□□ -1.13
PTPRO-208ENST00000542557 ANKRD24Q8TF21 1146 aa8.01□□□□□ -1.13
PTPRO-208ENST00000542557 DNAJC5Q9H3Z4 198 aa8.01□□□□□ -1.13
PTPRO-208ENST00000542557 DBF4Q9UBU7 674 aaPredicted RBP8.01□□□□□ -1.13
PTPRO-208ENST00000542557 CYP2E1P05181 493 aaPredicted RBP8.01□□□□□ -1.13
PTPRO-208ENST00000542557 MCM2P49736 904 aa8.01□□□□□ -1.13
PTPRO-208ENST00000542557 MTX1Q13505 466 aa8.01□□□□□ -1.13
PTPRO-208ENST00000542557 HSP90AB4PQ58FF6 505 aa8.01□□□□□ -1.13
PTPRO-208ENST00000542557 GOLGA6L22H0YM25 854 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 ALDH1L1O75891 902 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 EIF2S2P20042 333 aaKnown RBP8□□□□□ -1.13
PTPRO-208ENST00000542557 MCCP23508 829 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 CHMLP26374 656 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 AK9Q5TCS8 1911 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 PPP1R42Q7Z4L9 355 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 KIF1BPQ96EK5 621 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 RGPD5Q99666 1765 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 SCN11AQ9UI33 1791 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 ERBB3P21860 1342 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 USP42Q9H9J4 1324 aaKnown RBP8□□□□□ -1.13
PTPRO-208ENST00000542557 PI4KAP2A4QPH2 592 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 KCNQ3O43525 872 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 SSFA2P28290 1259 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 MPRIPQ6WCQ1 1025 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 PI4KAP1Q8N8J0 262 aa8□□□□□ -1.13
PTPRO-208ENST00000542557 GIGYF1O75420 1035 aaPredicted RBP7.99□□□□□ -1.13
PTPRO-208ENST00000542557 MRE11P49959 708 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 KRT28Q7Z3Y7 464 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 RHPN1Q8TCX5 695 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 HDAC5Q9UQL6 1122 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 COL18A1P39060 1754 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 ZBTB7CA1YPR0 619 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 TSHZ3Q63HK5 1081 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 C19orf44Q9H6X5 657 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 MRC1P22897 1456 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 SRGAP3O43295 1099 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 SURF6O75683 361 aaKnown RBP7.99□□□□□ -1.13
PTPRO-208ENST00000542557 BAG4O95429 457 aaKnown RBP7.99□□□□□ -1.13
PTPRO-208ENST00000542557 NBPF7P0C2Y1 421 aaPredicted RBP7.99□□□□□ -1.13
PTPRO-208ENST00000542557 XRCC6P12956 609 aaKnown RBP eCLIP7.99□□□□□ -1.13
PTPRO-208ENST00000542557 FAM43AQ8N2R8 423 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 PI4K2BQ8TCG2 481 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 UBE2Q2Q8WVN8 375 aa7.99□□□□□ -1.13
PTPRO-208ENST00000542557 GZF1Q9H116 711 aaPredicted RBP7.99□□□□□ -1.13
PTPRO-208ENST00000542557 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 SAMD1Q6SPF0 538 aaPredicted RBP7.98□□□□□ -1.13
PTPRO-208ENST00000542557 PROSER2Q86WR7 435 aaPredicted RBP7.98□□□□□ -1.13
PTPRO-208ENST00000542557 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 TTC41PQ6P2S7 1318 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 PKD1L3Q7Z443 1732 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 XPCQ01831 940 aaPredicted RBP7.98□□□□□ -1.13
PTPRO-208ENST00000542557 KLHL40Q2TBA0 621 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 KSR2Q6VAB6 950 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 PAXIP1Q6ZW49 1069 aaPredicted RBP7.98□□□□□ -1.13
PTPRO-208ENST00000542557 RILPL2Q969X0 211 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 IL1RAPL2Q9NP60 686 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 AXIN2Q9Y2T1 843 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 C5P01031 1676 aa7.98□□□□□ -1.13
PTPRO-208ENST00000542557 PARP4Q9UKK3 1724 aaKnown RBP7.97□□□□□ -1.13
PTPRO-208ENST00000542557 UTYO14607 1347 aa7.97□□□□□ -1.13
PTPRO-208ENST00000542557 CUL4AQ13619 759 aa7.97□□□□□ -1.13
PTPRO-208ENST00000542557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRO-208ENST00000542557 UNC5CLQ8IV45 518 aa7.97□□□□□ -1.13
PTPRO-208ENST00000542557 ANO2Q9NQ90 1003 aa7.97□□□□□ -1.13
PTPRO-208ENST00000542557 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTPRO-208ENST00000542557 KDM6AO15550 1401 aaPredicted RBP7.97□□□□□ -1.13
PTPRO-208ENST00000542557 NEK4P51957 841 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 ERC1Q8IUD2 1116 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 CNTROBQ8N137 903 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 INTS4Q96HW7 963 aaKnown RBP7.96□□□□□ -1.13
PTPRO-208ENST00000542557 GRPEL1Q9HAV7 217 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 MAP3K2Q9Y2U5 619 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 NPHP3Q7Z494 1330 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 RAD50Q92878 1312 aa7.96□□□□□ -1.13
PTPRO-208ENST00000542557 DDX58O95786 925 aaKnown RBP7.96□□□□□ -1.14
PTPRO-208ENST00000542557 ANXA1P04083 346 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms