RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 PLEKHF1Q96S99 279 aa29.28■■■□□ 2.28
C2CD3-216ENST00000541922 PARP3Q9Y6F1 533 aa29.28■■■□□ 2.28
C2CD3-216ENST00000541922 MAPK8IP3Q9UPT6 1336 aa29.26■■■□□ 2.27
C2CD3-216ENST00000541922 KCNQ3O43525 872 aa29.26■■■□□ 2.27
C2CD3-216ENST00000541922 YBX3P16989 372 aaKnown RBP eCLIP29.26■■■□□ 2.27
C2CD3-216ENST00000541922 CANXP27824 592 aaKnown RBP29.26■■■□□ 2.27
C2CD3-216ENST00000541922 FKBP8Q14318 412 aa29.26■■■□□ 2.27
C2CD3-216ENST00000541922 COL15A1P39059 1388 aa29.26■■■□□ 2.27
C2CD3-216ENST00000541922 GRIN3BO60391 1043 aa29.25■■■□□ 2.27
C2CD3-216ENST00000541922 USPL1Q5W0Q7 1092 aa29.24■■■□□ 2.27
C2CD3-216ENST00000541922 KIF13BQ9NQT8 1826 aa29.24■■■□□ 2.27
C2CD3-216ENST00000541922 NFE2L2Q16236 605 aa29.23■■■□□ 2.27
C2CD3-216ENST00000541922 NARFQ9UHQ1 456 aa29.23■■■□□ 2.27
C2CD3-216ENST00000541922 TAF7Q15545 349 aaPredicted RBP29.21■■■□□ 2.27
C2CD3-216ENST00000541922 C10orf71Q711Q0 1435 aa29.2■■■□□ 2.27
C2CD3-216ENST00000541922 EIF5P55010 431 aaKnown RBP29.19■■■□□ 2.26
C2CD3-216ENST00000541922 TGFB2P61812 414 aa29.19■■■□□ 2.26
C2CD3-216ENST00000541922 A0A087WZG4 1122 aa29.18■■■□□ 2.26
C2CD3-216ENST00000541922 DDR1Q08345 913 aa29.18■■■□□ 2.26
C2CD3-216ENST00000541922 WWC3Q9ULE0 1092 aa29.18■■■□□ 2.26
C2CD3-216ENST00000541922 TM4SF1P30408 202 aa29.17■■■□□ 2.26
C2CD3-216ENST00000541922 PRKRIP1Q9H875 184 aaPredicted RBP29.17■■■□□ 2.26
C2CD3-216ENST00000541922 ZNF330Q9Y3S2 320 aaPredicted RBP29.17■■■□□ 2.26
C2CD3-216ENST00000541922 PXDNLA1KZ92 1463 aa29.17■■■□□ 2.26
C2CD3-216ENST00000541922 N4BP2Q86UW6 1770 aaPredicted RBP29.16■■■□□ 2.26
C2CD3-216ENST00000541922 A1BGP04217 495 aa29.16■■■□□ 2.26
C2CD3-216ENST00000541922 SNRPA1P09661 255 aaKnown RBP29.16■■■□□ 2.26
C2CD3-216ENST00000541922 NPM2Q86SE8 214 aaKnown RBP29.16■■■□□ 2.26
C2CD3-216ENST00000541922 KIAA1551Q9HCM1 1747 aa29.15■■■□□ 2.26
C2CD3-216ENST00000541922 IL6STP40189 918 aaPredicted RBP29.15■■■□□ 2.26
C2CD3-216ENST00000541922 USP16Q9Y5T5 823 aa29.15■■■□□ 2.26
C2CD3-216ENST00000541922 POLRMTO00411 1230 aaKnown RBP29.14■■■□□ 2.26
C2CD3-216ENST00000541922 PNISRQ8TF01 805 aaKnown RBP29.14■■■□□ 2.26
C2CD3-216ENST00000541922 BCL2L12Q9HB09 334 aa29.14■■■□□ 2.26
C2CD3-216ENST00000541922 MIS18AQ9NYP9 233 aa29.14■■■□□ 2.26
C2CD3-216ENST00000541922 A0A0G2JLW4 131 aa29.13■■■□□ 2.25
C2CD3-216ENST00000541922 WDR43Q15061 677 aaKnown RBP eCLIP29.13■■■□□ 2.25
C2CD3-216ENST00000541922 THUMPD2Q9BTF0 503 aaKnown RBP29.13■■■□□ 2.25
C2CD3-216ENST00000541922 UTRNP46939 3433 aa29.13■■■□□ 2.25
C2CD3-216ENST00000541922 PRAMEF22A3QJZ6 481 aa29.12■■■□□ 2.25
C2CD3-216ENST00000541922 NFIXQ14938 502 aa29.12■■■□□ 2.25
C2CD3-216ENST00000541922 RIPK4P57078 832 aa29.11■■■□□ 2.25
C2CD3-216ENST00000541922 ZNF784Q8NCA9 323 aaPredicted RBP29.11■■■□□ 2.25
C2CD3-216ENST00000541922 KDM3BQ7LBC6 1761 aa29.11■■■□□ 2.25
C2CD3-216ENST00000541922 DPEP1P16444 411 aa29.1■■■□□ 2.25
C2CD3-216ENST00000541922 TBC1D2BQ9UPU7 963 aa29.1■■■□□ 2.25
C2CD3-216ENST00000541922 AFDNP55196 1824 aaKnown RBP29.09■■■□□ 2.25
C2CD3-216ENST00000541922 TMPOP42166 694 aaKnown RBP29.08■■■□□ 2.25
C2CD3-216ENST00000541922 SCN7AQ01118 1682 aa29.08■■■□□ 2.25
C2CD3-216ENST00000541922 PIP4K2AP48426 406 aaPredicted RBP29.07■■■□□ 2.24
C2CD3-216ENST00000541922 CCDC146Q8IYE0 955 aa29.07■■■□□ 2.24
C2CD3-216ENST00000541922 SERPINB2P05120 415 aa29.06■■■□□ 2.24
C2CD3-216ENST00000541922 LMOD3Q0VAK6 560 aa29.06■■■□□ 2.24
C2CD3-216ENST00000541922 BICDL1Q6ZP65 573 aa29.06■■■□□ 2.24
C2CD3-216ENST00000541922 BCS1LQ9Y276 419 aa29.06■■■□□ 2.24
C2CD3-216ENST00000541922 GOLGB1Q14789 3259 aaKnown RBP29.05■■■□□ 2.24
C2CD3-216ENST00000541922 BRCA1P38398 1863 aaKnown RBP29.05■■■□□ 2.24
C2CD3-216ENST00000541922 NRXN2Q9P2S2 1712 aa29.05■■■□□ 2.24
C2CD3-216ENST00000541922 LAMB4A4D0S4 1761 aa29.04■■■□□ 2.24
C2CD3-216ENST00000541922 DZIP3Q86Y13 1208 aaKnown RBP29.04■■■□□ 2.24
C2CD3-216ENST00000541922 RUNDC1Q96C34 613 aa29.04■■■□□ 2.24
C2CD3-216ENST00000541922 ADAMTS8Q9UP79 889 aa29.04■■■□□ 2.24
C2CD3-216ENST00000541922 CAMTA2O94983 1202 aa29.03■■■□□ 2.24
C2CD3-216ENST00000541922 EIF4A1P60842 406 aaKnown RBP29.03■■■□□ 2.24
C2CD3-216ENST00000541922 TBC1D9BQ66K14 1250 aa29.03■■■□□ 2.24
C2CD3-216ENST00000541922 RRP7AQ9Y3A4 280 aaKnown RBP29.03■■■□□ 2.24
C2CD3-216ENST00000541922 KCNA3P22001 575 aa29.02■■■□□ 2.24
C2CD3-216ENST00000541922 NEUROD2Q15784 382 aa29.02■■■□□ 2.24
C2CD3-216ENST00000541922 PIM2Q9P1W9 311 aa29.02■■■□□ 2.24
C2CD3-216ENST00000541922 BCORQ6W2J9 1755 aa29.01■■■□□ 2.23
C2CD3-216ENST00000541922 GIGYF1O75420 1035 aaPredicted RBP29.01■■■□□ 2.23
C2CD3-216ENST00000541922 TSPYL4Q9UJ04 414 aa29.01■■■□□ 2.23
C2CD3-216ENST00000541922 NBPF26B4DH59 902 aa29■■■□□ 2.23
C2CD3-216ENST00000541922 CHRNA5P30532 468 aa29■■■□□ 2.23
C2CD3-216ENST00000541922 NBPF10Q6P3W6 841 aaKnown RBP29■■■□□ 2.23
C2CD3-216ENST00000541922 NBPF15Q8N660 670 aa29■■■□□ 2.23
C2CD3-216ENST00000541922 ZNF316A6NFI3 1004 aaPredicted RBP28.99■■■□□ 2.23
C2CD3-216ENST00000541922 CARMIL3Q8ND23 1372 aa28.98■■■□□ 2.23
C2CD3-216ENST00000541922 ARFGEF1Q9Y6D6 1849 aa28.97■■■□□ 2.23
C2CD3-216ENST00000541922 DALRD3Q5D0E6 543 aaKnown RBP28.97■■■□□ 2.23
C2CD3-216ENST00000541922 SETDB2Q96T68 719 aa28.97■■■□□ 2.23
C2CD3-216ENST00000541922 BABAM1Q9NWV8 329 aa28.97■■■□□ 2.23
C2CD3-216ENST00000541922 ZNF652Q9Y2D9 606 aa28.96■■■□□ 2.23
C2CD3-216ENST00000541922 CLEC4GQ6UXB4 293 aa28.95■■■□□ 2.22
C2CD3-216ENST00000541922 ARHGAP27Q6ZUM4 889 aa28.94■■■□□ 2.22
C2CD3-216ENST00000541922 NPHP1O15259 732 aa28.92■■■□□ 2.22
C2CD3-216ENST00000541922 PRR5LQ6MZQ0 368 aa28.92■■■□□ 2.22
C2CD3-216ENST00000541922 TRIM35Q9UPQ4 493 aa28.92■■■□□ 2.22
C2CD3-216ENST00000541922 C2CD5Q86YS7 1000 aa28.91■■■□□ 2.22
C2CD3-216ENST00000541922 NGEFQ8N5V2 710 aa28.91■■■□□ 2.22
C2CD3-216ENST00000541922 DLEC1Q9Y238 1755 aa28.9■■■□□ 2.22
C2CD3-216ENST00000541922 H0YIN7 160 aa28.9■■■□□ 2.22
C2CD3-216ENST00000541922 RGL2O15211 777 aa28.9■■■□□ 2.22
C2CD3-216ENST00000541922 CNBD1Q8NA66 436 aa28.9■■■□□ 2.22
C2CD3-216ENST00000541922 ATP10DQ9P241 1426 aa28.9■■■□□ 2.22
C2CD3-216ENST00000541922 ANKRD31Q8N7Z5 1873 aa28.89■■■□□ 2.22
C2CD3-216ENST00000541922 BRIP1Q9BX63 1249 aa28.89■■■□□ 2.22
C2CD3-216ENST00000541922 ADCY9O60503 1353 aa28.88■■■□□ 2.21
C2CD3-216ENST00000541922 MYL6BP14649 208 aa28.88■■■□□ 2.21
C2CD3-216ENST00000541922 PDE6BP35913 854 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms