RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 MLH3Q9UHC1 1453 aa12.28□□□□□ -0.44
POLR1B-217ENST00000541869 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
POLR1B-217ENST00000541869 ZNF804AQ7Z570 1209 aa12.28□□□□□ -0.44
POLR1B-217ENST00000541869 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
POLR1B-217ENST00000541869 STK11IPQ8N1F8 1099 aa12.28□□□□□ -0.44
POLR1B-217ENST00000541869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■■■■ 96.1
POLR1B-217ENST00000541869 EIF2AK4Q9P2K8 1649 aaKnown RBP12.27□□□□□ -0.44
POLR1B-217ENST00000541869 RBM6P78332 1123 aaKnown RBP12.27□□□□□ -0.44
POLR1B-217ENST00000541869 CCDC96Q2M329 555 aa12.27□□□□□ -0.44
POLR1B-217ENST00000541869 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.44
POLR1B-217ENST00000541869 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.44
POLR1B-217ENST00000541869 H7C1D1 291 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 TXLNAP40222 546 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 CUL5Q93034 780 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 MYO5CQ9NQX4 1742 aa12.27□□□□□ -0.45
POLR1B-217ENST00000541869 HOXC9P31274 260 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
POLR1B-217ENST00000541869 ADGRL2O95490 1459 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 NLRP1Q9C000 1473 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
POLR1B-217ENST00000541869 CCDC69A6NI79 296 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 PIK3C2GO75747 1445 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 MVPQ14764 893 aaKnown RBP12.26□□□□□ -0.45
POLR1B-217ENST00000541869 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
POLR1B-217ENST00000541869 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
POLR1B-217ENST00000541869 RFX1P22670 979 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 KIF1BPQ96EK5 621 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 PLEKHG1Q9ULL1 1385 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 BCAR3O75815 825 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 FLIIQ13045 1269 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 TRAF1Q13077 416 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 FOXD4L5Q5VV16 416 aaPredicted RBP12.25□□□□□ -0.45
POLR1B-217ENST00000541869 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
POLR1B-217ENST00000541869 FOXD4L4Q8WXT5 416 aaPredicted RBP12.25□□□□□ -0.45
POLR1B-217ENST00000541869 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 EPS15P42566 896 aa12.25□□□□□ -0.45
POLR1B-217ENST00000541869 PTPRCP08575 1304 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 SEC63Q9UGP8 760 aaKnown RBP12.24□□□□□ -0.45
POLR1B-217ENST00000541869 UGGT1Q9NYU2 1555 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 TRIM37O94972 964 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 SLC39A6Q13433 755 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 IPO7O95373 1038 aaKnown RBP12.24□□□□□ -0.45
POLR1B-217ENST00000541869 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
POLR1B-217ENST00000541869 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 FBLN1P23142 703 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 EFCAB6Q5THR3 1501 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 CA8P35219 290 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 POLKQ9UBT6 870 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 F8W031 263 aaPredicted RBP12.23□□□□□ -0.45
POLR1B-217ENST00000541869 ALDH1B1P30837 517 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
POLR1B-217ENST00000541869 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
POLR1B-217ENST00000541869 ZCCHC11Q5TAX3 1644 aaKnown RBP12.22□□□□□ -0.45
POLR1B-217ENST00000541869 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
POLR1B-217ENST00000541869 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
POLR1B-217ENST00000541869 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
POLR1B-217ENST00000541869 ANKRD2Q9GZV1 360 aa12.22□□□□□ -0.45
POLR1B-217ENST00000541869 MINDY4BA8MYZ0 360 aa12.22□□□□□ -0.45
POLR1B-217ENST00000541869 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.45
POLR1B-217ENST00000541869 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 EYA1Q99502 592 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 IL16Q14005 1332 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 DRC1Q96MC2 740 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 IL1RAPL2Q9NP60 686 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 IVNS1ABPQ9Y6Y0 642 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 ZFYVE9O95405 1425 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.45
POLR1B-217ENST00000541869 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.45
POLR1B-217ENST00000541869 ARHGEF5Q12774 1597 aa12.21□□□□□ -0.46
POLR1B-217ENST00000541869 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.46
POLR1B-217ENST00000541869 RIMBP2O15034 1052 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 PI4KAP2A4QPH2 592 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 MSL1Q68DK7 614 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 PI4KAP1Q8N8J0 262 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 NAPBQ9H115 298 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-217ENST00000541869 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
POLR1B-217ENST00000541869 AFF2P51816 1311 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
POLR1B-217ENST00000541869 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-217ENST00000541869 SBNO1A3KN83 1393 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms