RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
PHACTR3-209ENST00000541461 HMMRO75330 724 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 GCP02774 474 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 LRSAM1Q6UWE0 723 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 NOL7Q9UMY1 257 aaKnown RBP12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 EXOC6BQ9Y2D4 811 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 PEAK1Q9H792 1746 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 ARHGEF10O15013 1369 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 HS1BP3Q53T59 392 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 OSBPL3Q9H4L5 887 aa12.84□□□□□ -0.35
PHACTR3-209ENST00000541461 AMPHP49418 695 aa12.83□□□□□ -0.36
PHACTR3-209ENST00000541461 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
PHACTR3-209ENST00000541461 R3HCC1Q9Y3T6 440 aaKnown RBP12.83□□□□□ -0.36
PHACTR3-209ENST00000541461 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
PHACTR3-209ENST00000541461 MED1Q15648 1581 aaPredicted RBP12.83□□□□□ -0.36
PHACTR3-209ENST00000541461 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
PHACTR3-209ENST00000541461 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
PHACTR3-209ENST00000541461 CRB1P82279 1406 aa12.82□□□□□ -0.36
PHACTR3-209ENST00000541461 RBM10P98175 930 aaKnown RBP12.82□□□□□ -0.36
PHACTR3-209ENST00000541461 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
PHACTR3-209ENST00000541461 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
PHACTR3-209ENST00000541461 LTN1O94822 1766 aa12.81□□□□□ -0.36
PHACTR3-209ENST00000541461 ZNF500O60304 480 aaPredicted RBP12.81□□□□□ -0.36
PHACTR3-209ENST00000541461 BRD1O95696 1058 aa12.81□□□□□ -0.36
PHACTR3-209ENST00000541461 ZMYND15Q9H091 742 aa12.81□□□□□ -0.36
PHACTR3-209ENST00000541461 NFAT5O94916 1531 aa12.81□□□□□ -0.36
PHACTR3-209ENST00000541461 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 CHRNA2Q15822 529 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 RILPL2Q969X0 211 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 TSPYL4Q9UJ04 414 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 GNAI2P04899 355 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 HOXC9P31274 260 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 ANO2Q9NQ90 1003 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
PHACTR3-209ENST00000541461 TRIM6-TRIM34B2RNG4 842 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 CUL4AQ13619 759 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 MBD3O95983 291 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 MX1P20591 662 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 CHMLP26374 656 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 MTHFSDQ2M296 383 aaKnown RBP12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 LRRCC1Q9C099 1032 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 AXIN2Q9Y2T1 843 aa12.79□□□□□ -0.36
PHACTR3-209ENST00000541461 MCM2P49736 904 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 SLIT3O75094 1523 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 MCCP23508 829 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 HSPA1LP34931 641 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 TERF1P54274 439 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
PHACTR3-209ENST00000541461 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
PHACTR3-209ENST00000541461 FLT4P35916 1363 aa12.77□□□□□ -0.36
PHACTR3-209ENST00000541461 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.36
PHACTR3-209ENST00000541461 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.36
PHACTR3-209ENST00000541461 RGPD5Q99666 1765 aa12.77□□□□□ -0.37
PHACTR3-209ENST00000541461 GADD45BO75293 160 aaPredicted RBP12.77□□□□□ -0.37
PHACTR3-209ENST00000541461 ATP8B2P98198 1209 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 IL25Q9H293 177 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 TSPY26PQ9H489 355 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 FAM13BQ9NYF5 915 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 TCHHQ07283 1943 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 INTS4Q96HW7 963 aaKnown RBP12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
PHACTR3-209ENST00000541461 UQCRHLA0A096LP55 91 aa12.75□□□□□ -0.37
PHACTR3-209ENST00000541461 UQCRHP07919 91 aa12.75□□□□□ -0.37
PHACTR3-209ENST00000541461 ANAPC15P60006 121 aa12.75□□□□□ -0.37
PHACTR3-209ENST00000541461 FLIIQ13045 1269 aa12.75□□□□□ -0.37
PHACTR3-209ENST00000541461 IP6K1Q92551 441 aa12.75□□□□□ -0.37
PHACTR3-209ENST00000541461 PKNOX2Q96KN3 472 aa12.75□□□□□ -0.37
PHACTR3-209ENST00000541461 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 MCM5P33992 734 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 GNAI3P08754 354 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 MPNDQ8N594 471 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 EYA1Q99502 592 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 IL1RAPL2Q9NP60 686 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
PHACTR3-209ENST00000541461 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 PTMAP06454 111 aaKnown RBP12.73□□□□□ -0.37
PHACTR3-209ENST00000541461 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms