RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SIRT2Q8IXJ6 389 aa19.08■□□□□ 0.65
CLPTM1-202ENST00000541297 NRAPQ86VF7 1730 aa19.08■□□□□ 0.64
CLPTM1-202ENST00000541297 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.64
CLPTM1-202ENST00000541297 NKX1-1Q15270 411 aaPredicted RBP19.07■□□□□ 0.64
CLPTM1-202ENST00000541297 SEC24BO95487 1268 aa19.07■□□□□ 0.64
CLPTM1-202ENST00000541297 CHMP4AQ9BY43 222 aa19.07■□□□□ 0.64
CLPTM1-202ENST00000541297 WNK3Q9BYP7 1800 aa19.06■□□□□ 0.64
CLPTM1-202ENST00000541297 ERVV-2B6SEH9 535 aa19.06■□□□□ 0.64
CLPTM1-202ENST00000541297 DISP2A7MBM2 1401 aa19.06■□□□□ 0.64
CLPTM1-202ENST00000541297 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
CLPTM1-202ENST00000541297 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
CLPTM1-202ENST00000541297 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
CLPTM1-202ENST00000541297 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
CLPTM1-202ENST00000541297 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
CLPTM1-202ENST00000541297 N4BP2Q86UW6 1770 aaPredicted RBP19.05■□□□□ 0.64
CLPTM1-202ENST00000541297 MYL6BP14649 208 aa19.04■□□□□ 0.64
CLPTM1-202ENST00000541297 PIP4K2AP48426 406 aaPredicted RBP19.04■□□□□ 0.64
CLPTM1-202ENST00000541297 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
CLPTM1-202ENST00000541297 CERKQ8TCT0 537 aa19.04■□□□□ 0.64
CLPTM1-202ENST00000541297 SNRPA1P09661 255 aaKnown RBP19.03■□□□□ 0.64
CLPTM1-202ENST00000541297 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
CLPTM1-202ENST00000541297 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
CLPTM1-202ENST00000541297 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 PDIA6Q15084 440 aa19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 C8orf37Q96NL8 207 aa19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 SPATA31A1Q5TZJ5 1347 aa19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 ADCY9O60503 1353 aa19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 EXOC5O00471 708 aa19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 ITGB4P16144 1822 aa19.02■□□□□ 0.64
CLPTM1-202ENST00000541297 UBR2Q8IWV8 1755 aa19.02■□□□□ 0.63
CLPTM1-202ENST00000541297 CEP85Q6P2H3 762 aa19.02■□□□□ 0.63
CLPTM1-202ENST00000541297 DNAAF4Q8WXU2 420 aa19.02■□□□□ 0.63
CLPTM1-202ENST00000541297 GLI3P10071 1580 aa19.01■□□□□ 0.63
CLPTM1-202ENST00000541297 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
CLPTM1-202ENST00000541297 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
CLPTM1-202ENST00000541297 HYPKQ9NX55 129 aa19.01■□□□□ 0.63
CLPTM1-202ENST00000541297 TMOD3Q9NYL9 352 aa19.01■□□□□ 0.63
CLPTM1-202ENST00000541297 JCADQ9P266 1359 aa19.01■□□□□ 0.63
CLPTM1-202ENST00000541297 PAPPAQ13219 1627 aa19■□□□□ 0.63
CLPTM1-202ENST00000541297 EIF5BO60841 1220 aaKnown RBP19■□□□□ 0.63
CLPTM1-202ENST00000541297 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
CLPTM1-202ENST00000541297 SLIT2O94813 1529 aa19■□□□□ 0.63
CLPTM1-202ENST00000541297 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
CLPTM1-202ENST00000541297 LNPKQ9C0E8 428 aa19■□□□□ 0.63
CLPTM1-202ENST00000541297 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
CLPTM1-202ENST00000541297 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
CLPTM1-202ENST00000541297 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
CLPTM1-202ENST00000541297 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
CLPTM1-202ENST00000541297 ANKRD45Q5TZF3 282 aa18.99■□□□□ 0.63
CLPTM1-202ENST00000541297 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 GNAI2P04899 355 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 SYTL4Q96C24 671 aaPredicted RBP18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 USP44Q9H0E7 712 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 NUCB1Q02818 461 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 BECN1Q14457 450 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 BEND3Q5T5X7 828 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 RPAP2Q8IXW5 612 aaPredicted RBP18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 PIGBQ92521 554 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 GCC1Q96CN9 775 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
CLPTM1-202ENST00000541297 TNS2Q63HR2 1409 aa18.97■□□□□ 0.63
CLPTM1-202ENST00000541297 GNAI3P08754 354 aa18.97■□□□□ 0.63
CLPTM1-202ENST00000541297 DDB1Q16531 1140 aa18.97■□□□□ 0.63
CLPTM1-202ENST00000541297 KSR2Q6VAB6 950 aa18.97■□□□□ 0.63
CLPTM1-202ENST00000541297 ASAP1Q9ULH1 1129 aa18.97■□□□□ 0.63
CLPTM1-202ENST00000541297 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
CLPTM1-202ENST00000541297 XAGE3Q8WTP9 111 aa18.96■□□□□ 0.63
CLPTM1-202ENST00000541297 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
CLPTM1-202ENST00000541297 COPS6Q7L5N1 327 aa18.96■□□□□ 0.63
CLPTM1-202ENST00000541297 THRAP3Q9Y2W1 955 aaKnown RBP18.96■□□□□ 0.63
CLPTM1-202ENST00000541297 A0A0G2JS52 829 aa18.95■□□□□ 0.62
CLPTM1-202ENST00000541297 UBTFL1P0CB47 393 aaPredicted RBP18.95■□□□□ 0.62
CLPTM1-202ENST00000541297 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
CLPTM1-202ENST00000541297 APBB1O00213 710 aa18.95■□□□□ 0.62
CLPTM1-202ENST00000541297 DDX58O95786 925 aaKnown RBP18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 NBPF7P0C2Y1 421 aaPredicted RBP18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 LRP6O75581 1613 aa18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 HSPA1LP34931 641 aa18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 DCTPP1Q9H773 170 aa18.94■□□□□ 0.62
CLPTM1-202ENST00000541297 LRP10Q7Z4F1 713 aa18.93■□□□□ 0.62
CLPTM1-202ENST00000541297 CDCA7Q9BWT1 371 aaPredicted RBP18.93■□□□□ 0.62
CLPTM1-202ENST00000541297 BCL9LQ86UU0 1499 aa18.93■□□□□ 0.62
CLPTM1-202ENST00000541297 A1BGP04217 495 aa18.93■□□□□ 0.62
CLPTM1-202ENST00000541297 FAM98CQ17RN3 349 aaKnown RBP18.93■□□□□ 0.62
CLPTM1-202ENST00000541297 ATG3Q9NT62 314 aa18.93■□□□□ 0.62
CLPTM1-202ENST00000541297 PNMA6EA0A0J9YXQ4 647 aa18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 NBPF26B4DH59 902 aa18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 NBPF14Q5TI25 921 aa18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 NBPF10Q6P3W6 841 aaKnown RBP18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 NBPF15Q8N660 670 aa18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
CLPTM1-202ENST00000541297 HMMRO75330 724 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms