RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
LMO3-225ENST00000541295 ZNF396Q96N95 335 aaPredicted RBP7.39□□□□□ -1.23
LMO3-225ENST00000541295 RSPH9Q9H1X1 276 aaPredicted RBP7.39□□□□□ -1.23
LMO3-225ENST00000541295 ADGRB3O60242 1522 aa7.38□□□□□ -1.23
LMO3-225ENST00000541295 BDNFP23560 247 aa7.38□□□□□ -1.23
LMO3-225ENST00000541295 GABPB1Q06547 395 aaPredicted RBP7.38□□□□□ -1.23
LMO3-225ENST00000541295 KIF2CQ99661 725 aa7.38□□□□□ -1.23
LMO3-225ENST00000541295 PHF8Q9UPP1 1060 aa7.38□□□□□ -1.23
LMO3-225ENST00000541295 SYNMO15061 1565 aa7.38□□□□□ -1.23
LMO3-225ENST00000541295 ATP6V1AP38606 617 aa7.38□□□□□ -1.23
LMO3-225ENST00000541295 CHAF1AQ13111 956 aaPredicted RBP7.38□□□□□ -1.23
LMO3-225ENST00000541295 PSMD2Q13200 908 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 DNAJC21Q5F1R6 531 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 DZIP3Q86Y13 1208 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 GABBR1Q9UBS5 961 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 KTN1Q86UP2 1357 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 CAND2O75155 1236 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 ECM2O94769 699 aaPredicted RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 HSP90AB1P08238 724 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 E2F5Q15329 346 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 RASSF4Q9H2L5 321 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 UTP6Q9NYH9 597 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 MYOM2P54296 1465 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 CLTCQ00610 1675 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 ZSCAN26Q16670 478 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 FAM161AQ3B820 660 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 KLHL10Q6JEL2 608 aa7.37□□□□□ -1.23
LMO3-225ENST00000541295 C1orf131Q8NDD1 294 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 CCDC47Q96A33 483 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 IQCGQ9H095 443 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 GNL3LQ9NVN8 582 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 CPSF2Q9P2I0 782 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 IQSEC3Q9UPP2 1182 aaPredicted RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 R3HCC1Q9Y3T6 440 aaKnown RBP7.37□□□□□ -1.23
LMO3-225ENST00000541295 CEBPAP49715 358 aaPredicted RBP7.36□□□□□ -1.23
LMO3-225ENST00000541295 ARHGEF40Q8TER5 1519 aa7.36□□□□□ -1.23
LMO3-225ENST00000541295 POU5F1Q01860 360 aaKnown RBP7.36□□□□□ -1.23
LMO3-225ENST00000541295 GJC2Q5T442 439 aaPredicted RBP7.36□□□□□ -1.23
LMO3-225ENST00000541295 AP1ARQ63HQ0 302 aa7.36□□□□□ -1.23
LMO3-225ENST00000541295 SREK1Q8WXA9 508 aaKnown RBP7.36□□□□□ -1.23
LMO3-225ENST00000541295 NINLQ9Y2I6 1382 aa7.36□□□□□ -1.23
LMO3-225ENST00000541295 PPFIA2O75334 1257 aa7.36□□□□□ -1.23
LMO3-225ENST00000541295 CCDC70Q6NSX1 233 aa7.36□□□□□ -1.23
LMO3-225ENST00000541295 C14orf93Q9H972 538 aaKnown RBP7.36□□□□□ -1.23
LMO3-225ENST00000541295 LAMC1P11047 1609 aa7.36□□□□□ -1.23
LMO3-225ENST00000541295 ERVK-7P63135 1459 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 IL16Q14005 1332 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 ZC3H13Q5T200 1668 aaKnown RBP7.35□□□□□ -1.23
LMO3-225ENST00000541295 ARHGAP31Q2M1Z3 1444 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 MS4A1P11836 297 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 MAGEA8P43361 318 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 HDLBPQ00341 1268 aaKnown RBP7.35□□□□□ -1.23
LMO3-225ENST00000541295 BARGINQ6ZT62 677 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 CCDC34Q96HJ3 373 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 TOMM22Q9NS69 142 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 PREX1Q8TCU6 1659 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 SHTN1A0MZ66 631 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 MCM6Q14566 821 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 GIMAP6Q6P9H5 292 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 RSPH1Q8WYR4 309 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 AGBL1Q96MI9 1066 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 IQGAP1P46940 1657 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 CCDC189A1A4V9 331 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 MRE11P49959 708 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 GYS2P54840 703 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 IFT88Q13099 833 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 TSR1Q2NL82 804 aaKnown RBP7.35□□□□□ -1.23
LMO3-225ENST00000541295 CCDC73Q6ZRK6 1079 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 STK11IPQ8N1F8 1099 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 CLUAP1Q96AJ1 413 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 TEX13AQ9BXU3 409 aaPredicted RBP7.35□□□□□ -1.23
LMO3-225ENST00000541295 POGKQ9P215 609 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 SUN2Q9UH99 717 aa7.35□□□□□ -1.23
LMO3-225ENST00000541295 PIK3C2GO75747 1445 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 MYBBP1AQ9BQG0 1328 aaKnown RBP7.34□□□□□ -1.23
LMO3-225ENST00000541295 KCNA2P16389 499 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 C11orf96Q7Z7L8 435 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 VPS37AQ8NEZ2 397 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 RABL2BQ9UNT1 228 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 MYO5BQ9ULV0 1848 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 MINK1Q8N4C8 1332 aaPredicted RBP7.34□□□□□ -1.23
LMO3-225ENST00000541295 ZMYM3Q14202 1370 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 CCDC194A0A1B0GVG4 234 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 ATICP31939 592 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 IQCF2Q8IXL9 164 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.34□□□□□ -1.23
LMO3-225ENST00000541295 C17orf50Q8WW18 174 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 FMNL2Q96PY5 1086 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 PPLO60437 1756 aa7.34□□□□□ -1.23
LMO3-225ENST00000541295 PIK3C2BO00750 1634 aa7.34□□□□□ -1.24
LMO3-225ENST00000541295 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 IRX1P78414 480 aaPredicted RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 C11orf91Q3C1V1 193 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 WWC2Q6AWC2 1192 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 LZTS2Q9BRK4 669 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 SWAP70Q9UH65 585 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 IFT172Q9UG01 1749 aa7.33□□□□□ -1.24
LMO3-225ENST00000541295 U2SURPO15042 1029 aaKnown RBP7.33□□□□□ -1.24
LMO3-225ENST00000541295 AMOTQ4VCS5 1084 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms