RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 KCPQ6ZWJ8 1503 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 GNAI2P04899 355 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
CNOT4-212ENST00000541284 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
CNOT4-212ENST00000541284 CUL4AQ13619 759 aa11.71□□□□□ -0.53
CNOT4-212ENST00000541284 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
CNOT4-212ENST00000541284 NWD2Q9ULI1 1742 aa11.71□□□□□ -0.53
CNOT4-212ENST00000541284 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.54
CNOT4-212ENST00000541284 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.54
CNOT4-212ENST00000541284 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.54
CNOT4-212ENST00000541284 REC8O95072 547 aa11.71□□□□□ -0.54
CNOT4-212ENST00000541284 USP44Q9H0E7 712 aa11.71□□□□□ -0.54
CNOT4-212ENST00000541284 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 ROBO1Q9Y6N7 1651 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 HMMRO75330 724 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 CHMLP26374 656 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 IP6K1Q92551 441 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 DDX49Q9Y6V7 483 aaKnown RBP11.7□□□□□ -0.54
CNOT4-212ENST00000541284 MEGF6O75095 1541 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-212ENST00000541284 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
CNOT4-212ENST00000541284 A0A1B0GUL6 1792 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 MX1P20591 662 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-212ENST00000541284 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 ST18O60284 1047 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 LRRCC1Q9C099 1032 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 RBSNQ9H1K0 784 aa11.69□□□□□ -0.54
CNOT4-212ENST00000541284 LAMB2P55268 1798 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 RTF1Q92541 710 aaKnown RBP11.68□□□□□ -0.54
CNOT4-212ENST00000541284 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 BRD1O95696 1058 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 NASPP49321 788 aaPredicted RBP11.68□□□□□ -0.54
CNOT4-212ENST00000541284 POLA2Q14181 598 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
CNOT4-212ENST00000541284 LRRFIP2Q9Y608 721 aaKnown RBP11.68□□□□□ -0.54
CNOT4-212ENST00000541284 CCDC173Q0VFZ6 552 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 CAVIN1Q6NZI2 390 aaKnown RBP11.68□□□□□ -0.54
CNOT4-212ENST00000541284 CASC1Q6TDU7 716 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 TMEM63CQ9P1W3 806 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 AOX1Q06278 1338 aa11.68□□□□□ -0.54
CNOT4-212ENST00000541284 PLPPR3Q6T4P5 718 aa11.67□□□□□ -0.54
CNOT4-212ENST00000541284 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
CNOT4-212ENST00000541284 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
CNOT4-212ENST00000541284 GNAI3P08754 354 aa11.67□□□□□ -0.54
CNOT4-212ENST00000541284 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
CNOT4-212ENST00000541284 TMEM94Q12767 1356 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 GOLGA6L22H0YM25 854 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 AMPHP49418 695 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
CNOT4-212ENST00000541284 ANAPC15P60006 121 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
CNOT4-212ENST00000541284 NEK4P51957 841 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-212ENST00000541284 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 TNS2Q63HR2 1409 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 PRPF40AO75400 957 aaKnown RBP11.66□□□□□ -0.54
CNOT4-212ENST00000541284 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
CNOT4-212ENST00000541284 STK31Q9BXU1 1019 aa11.65□□□□□ -0.54
CNOT4-212ENST00000541284 COL5A2P05997 1499 aaPredicted RBP11.65□□□□□ -0.54
CNOT4-212ENST00000541284 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.54
CNOT4-212ENST00000541284 BCORQ6W2J9 1755 aa11.65□□□□□ -0.55
CNOT4-212ENST00000541284 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-212ENST00000541284 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
CNOT4-212ENST00000541284 TCHHQ07283 1943 aa11.64□□□□□ -0.55
CNOT4-212ENST00000541284 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-212ENST00000541284 ARAP2Q8WZ64 1704 aa11.64□□□□□ -0.55
CNOT4-212ENST00000541284 INTS4Q96HW7 963 aaKnown RBP11.64□□□□□ -0.55
CNOT4-212ENST00000541284 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
CNOT4-212ENST00000541284 NLRP6P59044 892 aa11.64□□□□□ -0.55
CNOT4-212ENST00000541284 ADCY9O60503 1353 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 HSPA4P34932 840 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 USP42Q9H9J4 1324 aaKnown RBP11.63□□□□□ -0.55
CNOT4-212ENST00000541284 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-212ENST00000541284 EPB41L2O43491 1005 aaKnown RBP11.63□□□□□ -0.55
CNOT4-212ENST00000541284 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 TTC14Q96N46 770 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 ORAI2Q96SN7 254 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 SRCIN1Q9C0H9 1055 aa11.63□□□□□ -0.55
CNOT4-212ENST00000541284 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
CNOT4-212ENST00000541284 MCM2P49736 904 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 BEND3Q5T5X7 828 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 LRSAM1Q6UWE0 723 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 PPP1R42Q7Z4L9 355 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 C19orf44Q9H6X5 657 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 KCNQ3O43525 872 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 NBPF7P0C2Y1 421 aaPredicted RBP11.62□□□□□ -0.55
CNOT4-212ENST00000541284 LSG1Q9H089 658 aaKnown RBP11.62□□□□□ -0.55
CNOT4-212ENST00000541284 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms