RNA–Protein interactions for RNA: ENST00000541189.5

MSRB3-210, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-210ENST00000541189 RPS6KA4O75676 772 aa18.02■□□□□ 0.48
MSRB3-210ENST00000541189 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
MSRB3-210ENST00000541189 TFCP2L1Q9NZI6 479 aa18.02■□□□□ 0.48
MSRB3-210ENST00000541189 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.47
MSRB3-210ENST00000541189 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
MSRB3-210ENST00000541189 RREB1Q92766 1687 aa18.01■□□□□ 0.47
MSRB3-210ENST00000541189 KDM3BQ7LBC6 1761 aa18.01■□□□□ 0.47
MSRB3-210ENST00000541189 GNPATO15228 680 aa18■□□□□ 0.47
MSRB3-210ENST00000541189 A1BGP04217 495 aa18■□□□□ 0.47
MSRB3-210ENST00000541189 FLAD1Q8NFF5 587 aa18■□□□□ 0.47
MSRB3-210ENST00000541189 RTCBQ9Y3I0 505 aaKnown RBP18■□□□□ 0.47
MSRB3-210ENST00000541189 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
MSRB3-210ENST00000541189 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
MSRB3-210ENST00000541189 TSPYL6Q8N831 410 aa17.99■□□□□ 0.47
MSRB3-210ENST00000541189 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
MSRB3-210ENST00000541189 EIF2S2P20042 333 aaKnown RBP17.98■□□□□ 0.47
MSRB3-210ENST00000541189 SSFA2P28290 1259 aa17.98■□□□□ 0.47
MSRB3-210ENST00000541189 R3HDM1Q15032 1099 aaKnown RBP17.98■□□□□ 0.47
MSRB3-210ENST00000541189 TWISTNBQ3B726 338 aaPredicted RBP17.98■□□□□ 0.47
MSRB3-210ENST00000541189 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
MSRB3-210ENST00000541189 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
MSRB3-210ENST00000541189 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
MSRB3-210ENST00000541189 ADRA2BP18089 450 aa17.97■□□□□ 0.47
MSRB3-210ENST00000541189 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
MSRB3-210ENST00000541189 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
MSRB3-210ENST00000541189 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
MSRB3-210ENST00000541189 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
MSRB3-210ENST00000541189 C5P01031 1676 aa17.96■□□□□ 0.47
MSRB3-210ENST00000541189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
MSRB3-210ENST00000541189 NBPF26B4DH59 902 aa17.96■□□□□ 0.47
MSRB3-210ENST00000541189 VAMP4O75379 141 aa17.96■□□□□ 0.47
MSRB3-210ENST00000541189 EIF5P55010 431 aaKnown RBP17.96■□□□□ 0.47
MSRB3-210ENST00000541189 NBPF10Q6P3W6 841 aaKnown RBP17.96■□□□□ 0.47
MSRB3-210ENST00000541189 AMIGO3Q86WK7 504 aa17.96■□□□□ 0.47
MSRB3-210ENST00000541189 NBPF15Q8N660 670 aa17.96■□□□□ 0.47
MSRB3-210ENST00000541189 PNPLA7Q6ZV29 1317 aa17.96■□□□□ 0.46
MSRB3-210ENST00000541189 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
MSRB3-210ENST00000541189 TJP1Q07157 1748 aa17.95■□□□□ 0.46
MSRB3-210ENST00000541189 A0A087WZG4 1122 aa17.94■□□□□ 0.46
MSRB3-210ENST00000541189 PDIA6Q15084 440 aa17.94■□□□□ 0.46
MSRB3-210ENST00000541189 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
MSRB3-210ENST00000541189 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
MSRB3-210ENST00000541189 COL23A1Q86Y22 540 aaPredicted RBP17.94■□□□□ 0.46
MSRB3-210ENST00000541189 NECTIN2Q92692 538 aa17.94■□□□□ 0.46
MSRB3-210ENST00000541189 ARHGEF1Q92888 912 aaKnown RBP17.94■□□□□ 0.46
MSRB3-210ENST00000541189 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
MSRB3-210ENST00000541189 PSDA5PKW4 1024 aaPredicted RBP17.93■□□□□ 0.46
MSRB3-210ENST00000541189 PHF14O94880 888 aa17.93■□□□□ 0.46
MSRB3-210ENST00000541189 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
MSRB3-210ENST00000541189 DDX21Q9NR30 783 aaKnown RBP eCLIP17.93■□□□□ 0.46
MSRB3-210ENST00000541189 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
MSRB3-210ENST00000541189 RFC4P35249 363 aa17.92■□□□□ 0.46
MSRB3-210ENST00000541189 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
MSRB3-210ENST00000541189 SLC16A10Q8TF71 515 aa17.92■□□□□ 0.46
MSRB3-210ENST00000541189 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
MSRB3-210ENST00000541189 TAF1LQ8IZX4 1826 aa17.92■□□□□ 0.46
MSRB3-210ENST00000541189 COL5A3P25940 1745 aaPredicted RBP17.92■□□□□ 0.46
MSRB3-210ENST00000541189 MSH5O43196 834 aa17.91■□□□□ 0.46
MSRB3-210ENST00000541189 MYL6BP14649 208 aa17.91■□□□□ 0.46
MSRB3-210ENST00000541189 LRP10Q7Z4F1 713 aa17.91■□□□□ 0.46
MSRB3-210ENST00000541189 ZNF428Q96B54 188 aa17.91■□□□□ 0.46
MSRB3-210ENST00000541189 HYPKQ9NX55 129 aa17.91■□□□□ 0.46
MSRB3-210ENST00000541189 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
MSRB3-210ENST00000541189 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
MSRB3-210ENST00000541189 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
MSRB3-210ENST00000541189 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
MSRB3-210ENST00000541189 ZNF330Q9Y3S2 320 aaPredicted RBP17.9■□□□□ 0.46
MSRB3-210ENST00000541189 COL15A1P39059 1388 aa17.9■□□□□ 0.46
MSRB3-210ENST00000541189 NARFQ9UHQ1 456 aa17.89■□□□□ 0.45
MSRB3-210ENST00000541189 ZPR1O75312 459 aa17.88■□□□□ 0.45
MSRB3-210ENST00000541189 ANXA1P04083 346 aa17.88■□□□□ 0.45
MSRB3-210ENST00000541189 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
MSRB3-210ENST00000541189 TBC1D2BQ9UPU7 963 aa17.88■□□□□ 0.45
MSRB3-210ENST00000541189 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
MSRB3-210ENST00000541189 RGL2O15211 777 aa17.87■□□□□ 0.45
MSRB3-210ENST00000541189 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
MSRB3-210ENST00000541189 COPS6Q7L5N1 327 aa17.87■□□□□ 0.45
MSRB3-210ENST00000541189 ARXQ96QS3 562 aa17.87■□□□□ 0.45
MSRB3-210ENST00000541189 MYH14Q7Z406 1995 aaKnown RBP17.87■□□□□ 0.45
MSRB3-210ENST00000541189 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
MSRB3-210ENST00000541189 NLGN1Q8N2Q7 840 aa17.86■□□□□ 0.45
MSRB3-210ENST00000541189 XAGE3Q8WTP9 111 aa17.86■□□□□ 0.45
MSRB3-210ENST00000541189 SRP68Q9UHB9 627 aaKnown RBP17.86■□□□□ 0.45
MSRB3-210ENST00000541189 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 ERVV-1B6SEH8 477 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 CAMTA2O94983 1202 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 GYS1P13807 737 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 ALDH1L2Q3SY69 923 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 KIF6Q6ZMV9 814 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 MTFR1LQ9H019 292 aa17.85■□□□□ 0.45
MSRB3-210ENST00000541189 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
MSRB3-210ENST00000541189 CLEC4GQ6UXB4 293 aa17.84■□□□□ 0.45
MSRB3-210ENST00000541189 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
MSRB3-210ENST00000541189 MAP3K15Q6ZN16 1313 aa17.83■□□□□ 0.44
MSRB3-210ENST00000541189 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
MSRB3-210ENST00000541189 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
MSRB3-210ENST00000541189 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
MSRB3-210ENST00000541189 BCL2L12Q9HB09 334 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms