RNA–Protein interactions for RNA: ENST00000541081.1

TM7SF3-209, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-209ENST00000541081 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
TM7SF3-209ENST00000541081 MMP10P09238 476 aa12.32□□□□□ -0.44
TM7SF3-209ENST00000541081 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
TM7SF3-209ENST00000541081 CCDC87Q9NVE4 849 aa12.32□□□□□ -0.44
TM7SF3-209ENST00000541081 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
TM7SF3-209ENST00000541081 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
TM7SF3-209ENST00000541081 CYP19A1P11511 503 aaPredicted RBP12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 GYS1P13807 737 aa12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 REM2Q8IYK8 340 aaPredicted RBP12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 UTRNP46939 3433 aa12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
TM7SF3-209ENST00000541081 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 ZPR1O75312 459 aa12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 STARD3NLO95772 234 aa12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 RALBP1Q15311 655 aa12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 SRP68Q9UHB9 627 aaKnown RBP12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 USP42Q9H9J4 1324 aaKnown RBP12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 HEG1Q9ULI3 1381 aa12.29□□□□□ -0.44
TM7SF3-209ENST00000541081 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 GRIN3BO60391 1043 aa12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 MCM10Q7L590 875 aa12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 FMNL2Q96PY5 1086 aa12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 DLG5Q8TDM6 1919 aa12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 SOS1Q07889 1333 aaPredicted RBP12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 COL15A1P39059 1388 aa12.28□□□□□ -0.44
TM7SF3-209ENST00000541081 KIF13BQ9NQT8 1826 aa12.27□□□□□ -0.44
TM7SF3-209ENST00000541081 HTATSF1O43719 755 aaKnown RBP12.27□□□□□ -0.45
TM7SF3-209ENST00000541081 CANXP27824 592 aaKnown RBP12.27□□□□□ -0.45
TM7SF3-209ENST00000541081 TEX13AQ9BXU3 409 aaPredicted RBP12.27□□□□□ -0.45
TM7SF3-209ENST00000541081 WWC3Q9ULE0 1092 aa12.27□□□□□ -0.45
TM7SF3-209ENST00000541081 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.45
TM7SF3-209ENST00000541081 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
TM7SF3-209ENST00000541081 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
TM7SF3-209ENST00000541081 FKBP8Q14318 412 aa12.26□□□□□ -0.45
TM7SF3-209ENST00000541081 USPL1Q5W0Q7 1092 aa12.26□□□□□ -0.45
TM7SF3-209ENST00000541081 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
TM7SF3-209ENST00000541081 ZEB1P37275 1124 aaPredicted RBP12.25□□□□□ -0.45
TM7SF3-209ENST00000541081 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
TM7SF3-209ENST00000541081 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
TM7SF3-209ENST00000541081 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
TM7SF3-209ENST00000541081 C10orf71Q711Q0 1435 aa12.25□□□□□ -0.45
TM7SF3-209ENST00000541081 A0A087WZG4 1122 aa12.24□□□□□ -0.45
TM7SF3-209ENST00000541081 KCNQ3O43525 872 aa12.24□□□□□ -0.45
TM7SF3-209ENST00000541081 TGFB2P61812 414 aa12.24□□□□□ -0.45
TM7SF3-209ENST00000541081 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
TM7SF3-209ENST00000541081 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
TM7SF3-209ENST00000541081 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
TM7SF3-209ENST00000541081 NFE2L2Q16236 605 aa12.23□□□□□ -0.45
TM7SF3-209ENST00000541081 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
TM7SF3-209ENST00000541081 PLEKHF1Q96S99 279 aa12.23□□□□□ -0.45
TM7SF3-209ENST00000541081 A0A0G2JLW4 131 aa12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 TM4SF1P30408 202 aa12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 DDR1Q08345 913 aa12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 AFDNP55196 1824 aaKnown RBP12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
TM7SF3-209ENST00000541081 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 A1BGP04217 495 aa12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 DPEP1P16444 411 aa12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 BCS1LQ9Y276 419 aa12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
TM7SF3-209ENST00000541081 KDM3BQ7LBC6 1761 aa12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 NFIXQ14938 502 aa12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 PNISRQ8TF01 805 aaKnown RBP12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
TM7SF3-209ENST00000541081 PRAMEF22A3QJZ6 481 aa12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 RIPK4P57078 832 aa12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 BCORQ6W2J9 1755 aa12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 NRXN2Q9P2S2 1712 aa12.19□□□□□ -0.46
TM7SF3-209ENST00000541081 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
TM7SF3-209ENST00000541081 SERPINB2P05120 415 aa12.18□□□□□ -0.46
TM7SF3-209ENST00000541081 PIP4K2AP48426 406 aaPredicted RBP12.18□□□□□ -0.46
TM7SF3-209ENST00000541081 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
TM7SF3-209ENST00000541081 PRKRIP1Q9H875 184 aaPredicted RBP12.18□□□□□ -0.46
TM7SF3-209ENST00000541081 PIM2Q9P1W9 311 aa12.18□□□□□ -0.46
TM7SF3-209ENST00000541081 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
TM7SF3-209ENST00000541081 NPHP1O15259 732 aa12.17□□□□□ -0.46
TM7SF3-209ENST00000541081 CHRNA5P30532 468 aa12.17□□□□□ -0.46
TM7SF3-209ENST00000541081 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
TM7SF3-209ENST00000541081 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
TM7SF3-209ENST00000541081 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
TM7SF3-209ENST00000541081 KCNA3P22001 575 aa12.16□□□□□ -0.46
TM7SF3-209ENST00000541081 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
TM7SF3-209ENST00000541081 NEUROD2Q15784 382 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms