RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 MAPK8IP3Q9UPT6 1336 aa25.37■■□□□ 1.65
RAB35-204ENST00000540803 STARD3NLO95772 234 aa25.37■■□□□ 1.65
RAB35-204ENST00000540803 CHD4Q14839 1912 aa25.37■■□□□ 1.65
RAB35-204ENST00000540803 COL15A1P39059 1388 aa25.36■■□□□ 1.65
RAB35-204ENST00000540803 FKBP8Q14318 412 aa25.35■■□□□ 1.65
RAB35-204ENST00000540803 GPR162Q16538 588 aa25.35■■□□□ 1.65
RAB35-204ENST00000540803 TEX13AQ9BXU3 409 aaPredicted RBP25.35■■□□□ 1.65
RAB35-204ENST00000540803 KDM3BQ7LBC6 1761 aa25.35■■□□□ 1.65
RAB35-204ENST00000540803 CANXP27824 592 aaKnown RBP25.34■■□□□ 1.65
RAB35-204ENST00000540803 TAF7Q15545 349 aaPredicted RBP25.33■■□□□ 1.65
RAB35-204ENST00000540803 KIAA1551Q9HCM1 1747 aa25.33■■□□□ 1.65
RAB35-204ENST00000540803 YY1P25490 414 aa25.32■■□□□ 1.64
RAB35-204ENST00000540803 USPL1Q5W0Q7 1092 aa25.32■■□□□ 1.64
RAB35-204ENST00000540803 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
RAB35-204ENST00000540803 C10orf71Q711Q0 1435 aa25.31■■□□□ 1.64
RAB35-204ENST00000540803 ZPR1O75312 459 aa25.31■■□□□ 1.64
RAB35-204ENST00000540803 EIF5P55010 431 aaKnown RBP25.31■■□□□ 1.64
RAB35-204ENST00000540803 THUMPD2Q9BTF0 503 aaKnown RBP25.31■■□□□ 1.64
RAB35-204ENST00000540803 NARFQ9UHQ1 456 aa25.31■■□□□ 1.64
RAB35-204ENST00000540803 PRAMEF22A3QJZ6 481 aa25.3■■□□□ 1.64
RAB35-204ENST00000540803 YBX3P16989 372 aaKnown RBP eCLIP25.3■■□□□ 1.647e-12■■■■■ 36.7
RAB35-204ENST00000540803 MIS18AQ9NYP9 233 aa25.3■■□□□ 1.64
RAB35-204ENST00000540803 PARP3Q9Y6F1 533 aa25.3■■□□□ 1.64
RAB35-204ENST00000540803 N4BP2Q86UW6 1770 aaPredicted RBP25.29■■□□□ 1.64
RAB35-204ENST00000540803 ZNF316A6NFI3 1004 aaPredicted RBP25.29■■□□□ 1.64
RAB35-204ENST00000540803 DDR1Q08345 913 aa25.29■■□□□ 1.64
RAB35-204ENST00000540803 A1BGP04217 495 aa25.28■■□□□ 1.64
RAB35-204ENST00000540803 SNRPA1P09661 255 aaKnown RBP25.28■■□□□ 1.64
RAB35-204ENST00000540803 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
RAB35-204ENST00000540803 CCDC146Q8IYE0 955 aa25.28■■□□□ 1.64
RAB35-204ENST00000540803 BCL2L12Q9HB09 334 aa25.28■■□□□ 1.64
RAB35-204ENST00000540803 USP16Q9Y5T5 823 aa25.28■■□□□ 1.64
RAB35-204ENST00000540803 SCN7AQ01118 1682 aa25.28■■□□□ 1.64
RAB35-204ENST00000540803 LAMB4A4D0S4 1761 aa25.28■■□□□ 1.64
RAB35-204ENST00000540803 TM4SF1P30408 202 aa25.27■■□□□ 1.64
RAB35-204ENST00000540803 TMPOP42166 694 aaKnown RBP25.27■■□□□ 1.64
RAB35-204ENST00000540803 RIPK4P57078 832 aa25.27■■□□□ 1.64
RAB35-204ENST00000540803 AFDNP55196 1824 aaKnown RBP25.27■■□□□ 1.64
RAB35-204ENST00000540803 PXDNLA1KZ92 1463 aa25.27■■□□□ 1.64
RAB35-204ENST00000540803 IL6STP40189 918 aaPredicted RBP25.26■■□□□ 1.63
RAB35-204ENST00000540803 PNISRQ8TF01 805 aaKnown RBP25.26■■□□□ 1.63
RAB35-204ENST00000540803 ADAMTS8Q9UP79 889 aa25.26■■□□□ 1.63
RAB35-204ENST00000540803 A0A087WZG4 1122 aa25.25■■□□□ 1.63
RAB35-204ENST00000540803 POLRMTO00411 1230 aaKnown RBP25.25■■□□□ 1.63
RAB35-204ENST00000540803 NRXN2Q9P2S2 1712 aa25.24■■□□□ 1.63
RAB35-204ENST00000540803 BRCA1P38398 1863 aaKnown RBP25.23■■□□□ 1.63
RAB35-204ENST00000540803 BCORQ6W2J9 1755 aa25.23■■□□□ 1.63
RAB35-204ENST00000540803 TGFB2P61812 414 aa25.23■■□□□ 1.63
RAB35-204ENST00000540803 NFIXQ14938 502 aa25.23■■□□□ 1.63
RAB35-204ENST00000540803 RUNDC1Q96C34 613 aa25.23■■□□□ 1.63
RAB35-204ENST00000540803 RRP7AQ9Y3A4 280 aaKnown RBP25.23■■□□□ 1.63
RAB35-204ENST00000540803 ZNF330Q9Y3S2 320 aaPredicted RBP25.23■■□□□ 1.63
RAB35-204ENST00000540803 GRIN3BO60391 1043 aa25.22■■□□□ 1.63
RAB35-204ENST00000540803 PIP4K2AP48426 406 aaPredicted RBP25.22■■□□□ 1.63
RAB35-204ENST00000540803 WWC3Q9ULE0 1092 aa25.22■■□□□ 1.63
RAB35-204ENST00000540803 EIF4A1P60842 406 aaKnown RBP25.21■■□□□ 1.63
RAB35-204ENST00000540803 TBC1D2BQ9UPU7 963 aa25.21■■□□□ 1.63
RAB35-204ENST00000540803 LMOD3Q0VAK6 560 aa25.2■■□□□ 1.62
RAB35-204ENST00000540803 NEUROD2Q15784 382 aa25.19■■□□□ 1.62
RAB35-204ENST00000540803 A0A0G2JLW4 131 aa25.18■■□□□ 1.62
RAB35-204ENST00000540803 NBPF26B4DH59 902 aa25.18■■□□□ 1.62
RAB35-204ENST00000540803 GIGYF1O75420 1035 aaPredicted RBP25.18■■□□□ 1.62
RAB35-204ENST00000540803 NBPF10Q6P3W6 841 aaKnown RBP25.18■■□□□ 1.62
RAB35-204ENST00000540803 NBPF15Q8N660 670 aa25.18■■□□□ 1.62
RAB35-204ENST00000540803 CAMTA2O94983 1202 aa25.17■■□□□ 1.62
RAB35-204ENST00000540803 DPEP1P16444 411 aa25.17■■□□□ 1.62
RAB35-204ENST00000540803 NPM2Q86SE8 214 aaKnown RBP25.17■■□□□ 1.62
RAB35-204ENST00000540803 TSPYL4Q9UJ04 414 aa25.17■■□□□ 1.62
RAB35-204ENST00000540803 TRIM35Q9UPQ4 493 aa25.17■■□□□ 1.62
RAB35-204ENST00000540803 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
RAB35-204ENST00000540803 TBC1D9BQ66K14 1250 aa25.16■■□□□ 1.62
RAB35-204ENST00000540803 DZIP3Q86Y13 1208 aaKnown RBP25.16■■□□□ 1.62
RAB35-204ENST00000540803 SERPINB2P05120 415 aa25.15■■□□□ 1.62
RAB35-204ENST00000540803 BICDL1Q6ZP65 573 aa25.15■■□□□ 1.62
RAB35-204ENST00000540803 KCNA3P22001 575 aa25.14■■□□□ 1.62
RAB35-204ENST00000540803 BABAM1Q9NWV8 329 aa25.14■■□□□ 1.62
RAB35-204ENST00000540803 ARFGEF1Q9Y6D6 1849 aa25.12■■□□□ 1.61
RAB35-204ENST00000540803 DLEC1Q9Y238 1755 aa25.11■■□□□ 1.61
RAB35-204ENST00000540803 ANKRD31Q8N7Z5 1873 aa25.11■■□□□ 1.61
RAB35-204ENST00000540803 CARMIL3Q8ND23 1372 aa25.1■■□□□ 1.61
RAB35-204ENST00000540803 ZNF784Q8NCA9 323 aaPredicted RBP25.1■■□□□ 1.61
RAB35-204ENST00000540803 BCS1LQ9Y276 419 aa25.1■■□□□ 1.61
RAB35-204ENST00000540803 APAF1O14727 1248 aa25.09■■□□□ 1.61
RAB35-204ENST00000540803 CHRNA5P30532 468 aa25.09■■□□□ 1.61
RAB35-204ENST00000540803 ANP32CO43423 234 aa25.08■■□□□ 1.61
RAB35-204ENST00000540803 CHL1O00533 1208 aa25.07■■□□□ 1.6
RAB35-204ENST00000540803 CLEC4GQ6UXB4 293 aa25.07■■□□□ 1.6
RAB35-204ENST00000540803 SETDB2Q96T68 719 aa25.07■■□□□ 1.6
RAB35-204ENST00000540803 PIM2Q9P1W9 311 aa25.07■■□□□ 1.6
RAB35-204ENST00000540803 ZNF652Q9Y2D9 606 aa25.06■■□□□ 1.6
RAB35-204ENST00000540803 NUP98P52948 1817 aa25.06■■□□□ 1.6
RAB35-204ENST00000540803 RGL2O15211 777 aa25.05■■□□□ 1.6
RAB35-204ENST00000540803 PRR5LQ6MZQ0 368 aa25.05■■□□□ 1.6
RAB35-204ENST00000540803 LAS1LQ9Y4W2 734 aaKnown RBP25.05■■□□□ 1.6
RAB35-204ENST00000540803 ERBB4Q15303 1308 aa25.05■■□□□ 1.6
RAB35-204ENST00000540803 NGEFQ8N5V2 710 aa25.04■■□□□ 1.6
RAB35-204ENST00000540803 COL11A2P13942 1736 aaPredicted RBP25.03■■□□□ 1.6
RAB35-204ENST00000540803 MYL6BP14649 208 aa25.03■■□□□ 1.6
RAB35-204ENST00000540803 HLFQ16534 295 aa25.03■■□□□ 1.6
RAB35-204ENST00000540803 DALRD3Q5D0E6 543 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms