RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SPON1Q9HCB6 807 aa18.18■□□□□ 0.5
CYB561A3-216ENST00000540755 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 RLBP1P12271 317 aa18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 TNNQ9UQP3 1299 aa18.17■□□□□ 0.5
CYB561A3-216ENST00000540755 KCNQ3O43525 872 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 AAMPQ13685 434 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 UBR2Q8IWV8 1755 aa18.16■□□□□ 0.5
CYB561A3-216ENST00000540755 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
CYB561A3-216ENST00000540755 CABP4P57796 275 aa18.15■□□□□ 0.5
CYB561A3-216ENST00000540755 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
CYB561A3-216ENST00000540755 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
CYB561A3-216ENST00000540755 ITGB4P16144 1822 aa18.15■□□□□ 0.5
CYB561A3-216ENST00000540755 ZNF790Q6PG37 636 aa18.14■□□□□ 0.5
CYB561A3-216ENST00000540755 STK31Q9BXU1 1019 aa18.14■□□□□ 0.5
CYB561A3-216ENST00000540755 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.5
CYB561A3-216ENST00000540755 PTPRCP08575 1304 aa18.14■□□□□ 0.49
CYB561A3-216ENST00000540755 DOT1LQ8TEK3 1739 aa18.14■□□□□ 0.49
CYB561A3-216ENST00000540755 C5P01031 1676 aa18.13■□□□□ 0.49
CYB561A3-216ENST00000540755 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
CYB561A3-216ENST00000540755 ABCC4O15439 1325 aa18.12■□□□□ 0.49
CYB561A3-216ENST00000540755 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
CYB561A3-216ENST00000540755 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
CYB561A3-216ENST00000540755 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
CYB561A3-216ENST00000540755 HDGFL1Q5TGJ6 251 aa18.12■□□□□ 0.49
CYB561A3-216ENST00000540755 ZBTB7AO95365 584 aa18.11■□□□□ 0.49
CYB561A3-216ENST00000540755 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
CYB561A3-216ENST00000540755 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
CYB561A3-216ENST00000540755 DDX19BQ9UMR2 479 aa18.11■□□□□ 0.49
CYB561A3-216ENST00000540755 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
CYB561A3-216ENST00000540755 PTGER2P43116 358 aa18.1■□□□□ 0.49
CYB561A3-216ENST00000540755 SLC39A6Q13433 755 aa18.1■□□□□ 0.49
CYB561A3-216ENST00000540755 TMEM57Q8N5G2 664 aa18.1■□□□□ 0.49
CYB561A3-216ENST00000540755 PPP1R1BQ9UD71 204 aaPredicted RBP18.1■□□□□ 0.49
CYB561A3-216ENST00000540755 KAT6BQ8WYB5 2073 aa18.1■□□□□ 0.49
CYB561A3-216ENST00000540755 ZNF827Q17R98 1081 aa18.08■□□□□ 0.49
CYB561A3-216ENST00000540755 ITPRIPQ8IWB1 547 aa18.08■□□□□ 0.49
CYB561A3-216ENST00000540755 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.49
CYB561A3-216ENST00000540755 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.49
CYB561A3-216ENST00000540755 LY75O60449 1722 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 KCPQ6ZWJ8 1503 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 FLIIQ13045 1269 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 G2E3Q7L622 706 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 ZNF496Q96IT1 587 aaPredicted RBP18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 CHMP4BQ9H444 224 aaKnown RBP18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
CYB561A3-216ENST00000540755 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
CYB561A3-216ENST00000540755 TUBGCP6Q96RT7 1819 aa18.06■□□□□ 0.48
CYB561A3-216ENST00000540755 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
CYB561A3-216ENST00000540755 INTS3Q68E01 1043 aaKnown RBP18.05■□□□□ 0.48
CYB561A3-216ENST00000540755 CHPF2Q9P2E5 772 aa18.05■□□□□ 0.48
CYB561A3-216ENST00000540755 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
CYB561A3-216ENST00000540755 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
CYB561A3-216ENST00000540755 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
CYB561A3-216ENST00000540755 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
CYB561A3-216ENST00000540755 UTRNP46939 3433 aa18.04■□□□□ 0.48
CYB561A3-216ENST00000540755 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
CYB561A3-216ENST00000540755 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
CYB561A3-216ENST00000540755 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
CYB561A3-216ENST00000540755 PIGBQ92521 554 aa18.02■□□□□ 0.48
CYB561A3-216ENST00000540755 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
CYB561A3-216ENST00000540755 ZBTB40Q9NUA8 1239 aa18.02■□□□□ 0.48
CYB561A3-216ENST00000540755 COL24A1Q17RW2 1714 aa18.02■□□□□ 0.47
CYB561A3-216ENST00000540755 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 SYTL4Q96C24 671 aaPredicted RBP18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
CYB561A3-216ENST00000540755 ERBB4Q15303 1308 aa18■□□□□ 0.47
CYB561A3-216ENST00000540755 CCT4P50991 539 aaKnown RBP18■□□□□ 0.47
CYB561A3-216ENST00000540755 KCNQ4P56696 695 aa18■□□□□ 0.47
CYB561A3-216ENST00000540755 PDIA6Q15084 440 aa17.99■□□□□ 0.47
CYB561A3-216ENST00000540755 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
CYB561A3-216ENST00000540755 FHDC1Q9C0D6 1143 aaPredicted RBP17.99■□□□□ 0.47
CYB561A3-216ENST00000540755 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
CYB561A3-216ENST00000540755 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
CYB561A3-216ENST00000540755 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
CYB561A3-216ENST00000540755 PNPLA7Q6ZV29 1317 aa17.97■□□□□ 0.47
CYB561A3-216ENST00000540755 F6X3S4 739 aa17.97■□□□□ 0.47
CYB561A3-216ENST00000540755 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
CYB561A3-216ENST00000540755 ANXA1P04083 346 aa17.96■□□□□ 0.47
CYB561A3-216ENST00000540755 YY1P25490 414 aa17.96■□□□□ 0.47
CYB561A3-216ENST00000540755 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
CYB561A3-216ENST00000540755 ASAP1Q9ULH1 1129 aa17.96■□□□□ 0.47
CYB561A3-216ENST00000540755 CICQ96RK0 1608 aaPredicted RBP17.96■□□□□ 0.47
CYB561A3-216ENST00000540755 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms