RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 EIF2S2P20042 333 aaKnown RBP13.23□□□□□ -0.29
PPFIBP1-212ENST00000540503 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
PPFIBP1-212ENST00000540503 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
PPFIBP1-212ENST00000540503 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
PPFIBP1-212ENST00000540503 ITPK1Q13572 414 aa13.22□□□□□ -0.29
PPFIBP1-212ENST00000540503 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 USP16Q9Y5T5 823 aa13.21□□□□□ -0.29
PPFIBP1-212ENST00000540503 KIF16BQ96L93 1317 aa13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 CRKLP46109 303 aaKnown RBP13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 ILDR2Q71H61 639 aa13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 AK7Q96M32 723 aa13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
PPFIBP1-212ENST00000540503 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
PPFIBP1-212ENST00000540503 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
PPFIBP1-212ENST00000540503 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
PPFIBP1-212ENST00000540503 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
PPFIBP1-212ENST00000540503 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
PPFIBP1-212ENST00000540503 A0A087WZG4 1122 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 GNPATO15228 680 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 A1BGP04217 495 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 MYL6BP14649 208 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 KCNQ4P56696 695 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 COL15A1P39059 1388 aa13.17□□□□□ -0.3
PPFIBP1-212ENST00000540503 PTPRCP08575 1304 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 ADRA2BP18089 450 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 PROM2Q8N271 834 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 STK32BQ9NY57 414 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
PPFIBP1-212ENST00000540503 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 FLIIQ13045 1269 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 PDIA6Q15084 440 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
PPFIBP1-212ENST00000540503 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
PPFIBP1-212ENST00000540503 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.31
PPFIBP1-212ENST00000540503 BCAR3O75815 825 aa13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 ANXA1P04083 346 aa13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 SSFA2P28290 1259 aa13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 FKBP5Q13451 457 aaPredicted RBP13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 PROSER3Q2NL68 480 aa13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 PXDNLA1KZ92 1463 aa13.14□□□□□ -0.31
PPFIBP1-212ENST00000540503 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
PPFIBP1-212ENST00000540503 MS4A1P11836 297 aa13.13□□□□□ -0.31
PPFIBP1-212ENST00000540503 ZKSCAN2Q63HK3 967 aa13.13□□□□□ -0.31
PPFIBP1-212ENST00000540503 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
PPFIBP1-212ENST00000540503 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
PPFIBP1-212ENST00000540503 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
PPFIBP1-212ENST00000540503 AIMP1Q12904 312 aaKnown RBP13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 LRP10Q7Z4F1 713 aa13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
PPFIBP1-212ENST00000540503 PHF14O94880 888 aa13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
PPFIBP1-212ENST00000540503 ARXQ96QS3 562 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms