RNA–Protein interactions for RNA: ENST00000540501.1

STIP1-208, Transcript of stress induced phosphoprotein 1, human

TSL 3

Gene STIP1, Length 880 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STIP1-208	ENST00000540501	TAF1L	Q8IZX4	1826 aa		33.02	■■■□□ 2.88
STIP1-208	ENST00000540501	ALDH1L2	Q3SY69	923 aa		33.02	■■■□□ 2.88
STIP1-208	ENST00000540501	CYP19A1	P11511	503 aa	Predicted RBP	33.01	■■■□□ 2.87
STIP1-208	ENST00000540501	EN1	Q05925	392 aa	Predicted RBP	33.01	■■■□□ 2.87
STIP1-208	ENST00000540501	ITPK1	Q13572	414 aa		33.01	■■■□□ 2.87
STIP1-208	ENST00000540501	RC3H1	Q5TC82	1133 aa	Known RBP	33.01	■■■□□ 2.87
STIP1-208	ENST00000540501	STK31	Q9BXU1	1019 aa		33.01	■■■□□ 2.87
STIP1-208	ENST00000540501	COL5A3	P25940	1745 aa	Predicted RBP	33.01	■■■□□ 2.87
STIP1-208	ENST00000540501	PRAMEF22	A3QJZ6	481 aa		33	■■■□□ 2.87
STIP1-208	ENST00000540501	CENPB	P07199	599 aa	Predicted RBP	32.99	■■■□□ 2.87
STIP1-208	ENST00000540501	PROM2	Q8N271	834 aa		32.99	■■■□□ 2.87
STIP1-208	ENST00000540501	DBF4	Q9UBU7	674 aa	Predicted RBP	32.99	■■■□□ 2.87
STIP1-208	ENST00000540501	CNTNAP4	Q9C0A0	1308 aa		32.99	■■■□□ 2.87
STIP1-208	ENST00000540501	LRRC4B	Q9NT99	713 aa		32.97	■■■□□ 2.87
STIP1-208	ENST00000540501	EZH2	Q15910	746 aa	Known RBP	32.96	■■■□□ 2.87
STIP1-208	ENST00000540501	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.96	■■■□□ 2.87
STIP1-208	ENST00000540501	CCDC87	Q9NVE4	849 aa		32.96	■■■□□ 2.87
STIP1-208	ENST00000540501	LINC00116	Q8NCU8	138 aa		32.95	■■■□□ 2.87
STIP1-208	ENST00000540501	CRKL	P46109	303 aa	Known RBP	32.94	■■■□□ 2.86
STIP1-208	ENST00000540501	RARS	P54136	660 aa	Known RBP	32.94	■■■□□ 2.86
STIP1-208	ENST00000540501	DEFB132	Q7Z7B7	95 aa		32.94	■■■□□ 2.86
STIP1-208	ENST00000540501	NPM2	Q86SE8	214 aa	Known RBP	32.93	■■■□□ 2.86
STIP1-208	ENST00000540501	HYPK	Q9NX55	129 aa		32.93	■■■□□ 2.86
STIP1-208	ENST00000540501	RCAN3	Q9UKA8	241 aa		32.93	■■■□□ 2.86
STIP1-208	ENST00000540501	RREB1	Q92766	1687 aa		32.93	■■■□□ 2.86
STIP1-208	ENST00000540501	C4B	P0C0L5	1744 aa		32.92	■■■□□ 2.86
STIP1-208	ENST00000540501	A1BG	P04217	495 aa		32.92	■■■□□ 2.86
STIP1-208	ENST00000540501	BRPF1	P55201	1214 aa	Predicted RBP	32.92	■■■□□ 2.86
STIP1-208	ENST00000540501	NECTIN2	Q92692	538 aa		32.92	■■■□□ 2.86
STIP1-208	ENST00000540501	MYH14	Q7Z406	1995 aa	Known RBP	32.92	■■■□□ 2.86
STIP1-208	ENST00000540501	IL6ST	P40189	918 aa	Predicted RBP	32.91	■■■□□ 2.86
STIP1-208	ENST00000540501	KCNQ4	P56696	695 aa		32.91	■■■□□ 2.86
STIP1-208	ENST00000540501	CHPF2	Q9P2E5	772 aa		32.91	■■■□□ 2.86
STIP1-208	ENST00000540501	SSH1	Q8WYL5	1049 aa		32.9	■■■□□ 2.86
STIP1-208	ENST00000540501	AK7	Q96M32	723 aa		32.9	■■■□□ 2.86
STIP1-208	ENST00000540501	SMC4	Q9NTJ3	1288 aa		32.9	■■■□□ 2.86
STIP1-208	ENST00000540501	SLC4A2	P04920	1241 aa		32.89	■■■□□ 2.86
STIP1-208	ENST00000540501	INTS5	Q6P9B9	1019 aa	Known RBP	32.89	■■■□□ 2.86
STIP1-208	ENST00000540501	PDIA6	Q15084	440 aa		32.88	■■■□□ 2.85
STIP1-208	ENST00000540501	ZBTB1	Q9Y2K1	713 aa		32.88	■■■□□ 2.85
STIP1-208	ENST00000540501	RPS6KA4	O75676	772 aa		32.87	■■■□□ 2.85
STIP1-208	ENST00000540501	CANX	P27824	592 aa	Known RBP	32.86	■■■□□ 2.85
STIP1-208	ENST00000540501	MRPL50	Q8N5N7	158 aa	Known RBP	32.86	■■■□□ 2.85
STIP1-208	ENST00000540501	RTCB	Q9Y3I0	505 aa	Known RBP	32.86	■■■□□ 2.85
STIP1-208	ENST00000540501	KIF16B	Q96L93	1317 aa		32.85	■■■□□ 2.85
STIP1-208	ENST00000540501		A0A087WZG4	1122 aa		32.85	■■■□□ 2.85
STIP1-208	ENST00000540501	NBPF26	B4DH59	902 aa		32.85	■■■□□ 2.85
STIP1-208	ENST00000540501	NBPF14	Q5TI25	921 aa		32.85	■■■□□ 2.85
STIP1-208	ENST00000540501	NBPF10	Q6P3W6	841 aa	Known RBP	32.85	■■■□□ 2.85
STIP1-208	ENST00000540501	NBPF15	Q8N660	670 aa		32.85	■■■□□ 2.85
STIP1-208	ENST00000540501	MYL6B	P14649	208 aa		32.84	■■■□□ 2.85
STIP1-208	ENST00000540501	NUP188	Q5SRE5	1749 aa		32.84	■■■□□ 2.85
STIP1-208	ENST00000540501	TCERG1	O14776	1098 aa	Known RBP	32.83	■■■□□ 2.85
STIP1-208	ENST00000540501	GNPAT	O15228	680 aa		32.83	■■■□□ 2.85
STIP1-208	ENST00000540501	ADRA2B	P18089	450 aa		32.83	■■■□□ 2.85
STIP1-208	ENST00000540501	EIF5	P55010	431 aa	Known RBP	32.83	■■■□□ 2.85
STIP1-208	ENST00000540501	STK32B	Q9NY57	414 aa		32.83	■■■□□ 2.85
STIP1-208	ENST00000540501	FLAD1	Q8NFF5	587 aa		32.82	■■■□□ 2.84
STIP1-208	ENST00000540501	AKT1S1	Q96B36	256 aa		32.82	■■■□□ 2.84
STIP1-208	ENST00000540501	IPO8	O15397	1037 aa	Known RBP	32.81	■■■□□ 2.84
STIP1-208	ENST00000540501	DDX58	O95786	925 aa	Known RBP	32.81	■■■□□ 2.84
STIP1-208	ENST00000540501	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.81	■■■□□ 2.84
STIP1-208	ENST00000540501	PTPRC	P08575	1304 aa		32.8	■■■□□ 2.84
STIP1-208	ENST00000540501	SSFA2	P28290	1259 aa		32.8	■■■□□ 2.84
STIP1-208	ENST00000540501	PROSER3	Q2NL68	480 aa		32.8	■■■□□ 2.84
STIP1-208	ENST00000540501	LRP10	Q7Z4F1	713 aa		32.8	■■■□□ 2.84
STIP1-208	ENST00000540501	BCL2L13	Q9BXK5	485 aa		32.8	■■■□□ 2.84
STIP1-208	ENST00000540501	UBR3	Q6ZT12	1888 aa		32.8	■■■□□ 2.84
STIP1-208	ENST00000540501	FLII	Q13045	1269 aa		32.79	■■■□□ 2.84
STIP1-208	ENST00000540501	BCAR3	O75815	825 aa		32.78	■■■□□ 2.84
STIP1-208	ENST00000540501	ANXA1	P04083	346 aa		32.78	■■■□□ 2.84
STIP1-208	ENST00000540501	PIP4K2A	P48426	406 aa	Predicted RBP	32.78	■■■□□ 2.84
STIP1-208	ENST00000540501	TRAPPC3L	Q5T215	181 aa		32.78	■■■□□ 2.84
STIP1-208	ENST00000540501	ARHGAP45	Q92619	1136 aa		32.78	■■■□□ 2.84
STIP1-208	ENST00000540501	TFCP2L1	Q9NZI6	479 aa		32.78	■■■□□ 2.84
STIP1-208	ENST00000540501	SLC15A2	Q16348	729 aa		32.77	■■■□□ 2.84
STIP1-208	ENST00000540501	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.77	■■■□□ 2.84
STIP1-208	ENST00000540501	COL15A1	P39059	1388 aa		32.77	■■■□□ 2.84
STIP1-208	ENST00000540501	KIF6	Q6ZMV9	814 aa		32.76	■■■□□ 2.83
STIP1-208	ENST00000540501	COPS6	Q7L5N1	327 aa		32.76	■■■□□ 2.83
STIP1-208	ENST00000540501	XAGE3	Q8WTP9	111 aa		32.76	■■■□□ 2.83
STIP1-208	ENST00000540501	PHAX	Q9H814	394 aa	Known RBP	32.76	■■■□□ 2.83
STIP1-208	ENST00000540501	QSER1	Q2KHR3	1735 aa		32.74	■■■□□ 2.83
STIP1-208	ENST00000540501	RGL2	O15211	777 aa		32.74	■■■□□ 2.83
STIP1-208	ENST00000540501	FKBP5	Q13451	457 aa	Predicted RBP	32.74	■■■□□ 2.83
STIP1-208	ENST00000540501	AIMP1	Q12904	312 aa	Known RBP	32.73	■■■□□ 2.83
STIP1-208	ENST00000540501	ZNF827	Q17R98	1081 aa		32.73	■■■□□ 2.83
STIP1-208	ENST00000540501	G2E3	Q7L622	706 aa		32.73	■■■□□ 2.83
STIP1-208	ENST00000540501	DZIP3	Q86Y13	1208 aa	Known RBP	32.73	■■■□□ 2.83
STIP1-208	ENST00000540501	API5	Q9BZZ5	524 aa	Known RBP	32.73	■■■□□ 2.83
STIP1-208	ENST00000540501	NOB1	Q9ULX3	412 aa	Known RBP	32.73	■■■□□ 2.83
STIP1-208	ENST00000540501	MS4A1	P11836	297 aa		32.72	■■■□□ 2.83
STIP1-208	ENST00000540501	ZKSCAN2	Q63HK3	967 aa		32.72	■■■□□ 2.83
STIP1-208	ENST00000540501	ANKRD13D	Q6ZTN6	518 aa		32.72	■■■□□ 2.83
STIP1-208	ENST00000540501	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.71	■■■□□ 2.83
STIP1-208	ENST00000540501	ERVV-1	B6SEH8	477 aa		32.71	■■■□□ 2.83
STIP1-208	ENST00000540501	PLBD2	Q8NHP8	589 aa		32.71	■■■□□ 2.83
STIP1-208	ENST00000540501	ARX	Q96QS3	562 aa		32.71	■■■□□ 2.83
STIP1-208	ENST00000540501	RFC4	P35249	363 aa		32.7	■■■□□ 2.83
STIP1-208	ENST00000540501	KSR2	Q6VAB6	950 aa		32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms