RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
GPD2-213ENST00000540309 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
GPD2-213ENST00000540309 XRN1Q8IZH2 1706 aaKnown RBP12.33□□□□□ -0.44
GPD2-213ENST00000540309 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
GPD2-213ENST00000540309 TUBB4AP04350 444 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 IDI1Q13907 227 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
GPD2-213ENST00000540309 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPD2-213ENST00000540309 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
GPD2-213ENST00000540309 CRB1P82279 1406 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 SGSM2O43147 1006 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 PDCP20941 246 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 U2AF2P26368 475 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPD2-213ENST00000540309 DHX8Q14562 1220 aaKnown RBP12.32□□□□□ -0.44
GPD2-213ENST00000540309 MAP3K11Q16584 847 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 SIRT1Q96EB6 747 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 NEO1Q92859 1461 aa12.32□□□□□ -0.44
GPD2-213ENST00000540309 PLA2G4DQ86XP0 818 aa12.31□□□□□ -0.44
GPD2-213ENST00000540309 TDRD7Q8NHU6 1098 aaKnown RBP12.31□□□□□ -0.44
GPD2-213ENST00000540309 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
GPD2-213ENST00000540309 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
GPD2-213ENST00000540309 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
GPD2-213ENST00000540309 GGT6Q6P531 493 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 KRT222Q8N1A0 295 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 TSC1Q92574 1164 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 COG3Q96JB2 828 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 USP42Q9H9J4 1324 aaKnown RBP12.3□□□□□ -0.44
GPD2-213ENST00000540309 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 RBM6P78332 1123 aaKnown RBP12.3□□□□□ -0.44
GPD2-213ENST00000540309 KRT85P78386 507 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 SARM1Q6SZW1 724 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
GPD2-213ENST00000540309 KIF18AQ8NI77 898 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 SCAND2PQ9GZW5 306 aaPredicted RBP12.3□□□□□ -0.44
GPD2-213ENST00000540309 TSPYL1Q9H0U9 437 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
GPD2-213ENST00000540309 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 TERF2Q15554 542 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 GIMAP6Q6P9H5 292 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 ZNF771Q7L3S4 317 aaPredicted RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 ARID3AQ99856 593 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 NUP62CLQ9H1M0 184 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 DIP2CQ9Y2E4 1556 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 MAP3K5Q99683 1374 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 NPHP3Q7Z494 1330 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 AP5Z1O43299 807 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
GPD2-213ENST00000540309 C17orf53Q8N3J3 647 aaPredicted RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 UPF3BQ9BZI7 483 aaKnown RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
GPD2-213ENST00000540309 STK26Q9P289 416 aa12.29□□□□□ -0.44
GPD2-213ENST00000540309 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 TTC21BQ7Z4L5 1316 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 TNNT1P13805 278 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 AK2P54819 239 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 TYRO3Q06418 890 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 CNTROBQ8N137 903 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 RILPL2Q969X0 211 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 HYPKQ9NX55 129 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 MRVI1Q9Y6F6 885 aa12.28□□□□□ -0.44
GPD2-213ENST00000540309 FAM83GA6ND36 823 aa12.27□□□□□ -0.44
GPD2-213ENST00000540309 ZNF75DP51815 510 aa12.27□□□□□ -0.44
GPD2-213ENST00000540309 HSP90AB4PQ58FF6 505 aa12.27□□□□□ -0.44
GPD2-213ENST00000540309 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.44
GPD2-213ENST00000540309 ERO1AQ96HE7 468 aa12.27□□□□□ -0.44
GPD2-213ENST00000540309 MRFAP1L1Q96HT8 127 aa12.27□□□□□ -0.44
GPD2-213ENST00000540309 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.44
GPD2-213ENST00000540309 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 TTC21AQ8NDW8 1320 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 LRRC37A3O60309 1634 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 FIBPO43427 364 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 PPP6R1Q9UPN7 881 aa12.27□□□□□ -0.45
GPD2-213ENST00000540309 APBB1O00213 710 aa12.26□□□□□ -0.45
GPD2-213ENST00000540309 PTGS1P23219 599 aa12.26□□□□□ -0.45
GPD2-213ENST00000540309 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
GPD2-213ENST00000540309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.26□□□□□ -0.45
GPD2-213ENST00000540309 EXOC6BQ9Y2D4 811 aa12.26□□□□□ -0.45
GPD2-213ENST00000540309 GJB2P29033 226 aa12.25□□□□□ -0.45
GPD2-213ENST00000540309 KCNJ6P48051 423 aa12.25□□□□□ -0.45
GPD2-213ENST00000540309 POLA2Q14181 598 aa12.25□□□□□ -0.45
GPD2-213ENST00000540309 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
GPD2-213ENST00000540309 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms