RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
CPSF7-219ENST00000539952 LMNB1P20700 586 aa8.2□□□□□ -1.1
CPSF7-219ENST00000539952 TM4SF1P30408 202 aa8.2□□□□□ -1.1
CPSF7-219ENST00000539952 CABP4P57796 275 aa8.2□□□□□ -1.1
CPSF7-219ENST00000539952 AMOTQ4VCS5 1084 aa8.2□□□□□ -1.1
CPSF7-219ENST00000539952 CICQ96RK0 1608 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-219ENST00000539952 UBR3Q6ZT12 1888 aa8.19□□□□□ -1.1
CPSF7-219ENST00000539952 ZPR1O75312 459 aa8.19□□□□□ -1.1
CPSF7-219ENST00000539952 RGPD2P0DJD1 1756 aa8.19□□□□□ -1.1
CPSF7-219ENST00000539952 PRR29P0C7W0 189 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 CHRNA5P30532 468 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 CRKLP46109 303 aaKnown RBP8.18□□□□□ -1.1
CPSF7-219ENST00000539952 MTHFSP49914 203 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 MNX1P50219 401 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-219ENST00000539952 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 CARD14Q9BXL6 1004 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 POLKQ9UBT6 870 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 ZBTB47Q9UFB7 747 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-219ENST00000539952 KCPQ6ZWJ8 1503 aa8.18□□□□□ -1.1
CPSF7-219ENST00000539952 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
CPSF7-219ENST00000539952 PTCD1O75127 700 aaKnown RBP8.17□□□□□ -1.1
CPSF7-219ENST00000539952 CHADLQ6NUI6 762 aa8.17□□□□□ -1.1
CPSF7-219ENST00000539952 NFATC2IPQ8NCF5 419 aa8.17□□□□□ -1.1
CPSF7-219ENST00000539952 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
CPSF7-219ENST00000539952 USP42Q9H9J4 1324 aaKnown RBP8.17□□□□□ -1.1
CPSF7-219ENST00000539952 NCAPD2Q15021 1401 aa8.17□□□□□ -1.1
CPSF7-219ENST00000539952 WDR90Q96KV7 1748 aa8.17□□□□□ -1.1
CPSF7-219ENST00000539952 ITGB4P16144 1822 aa8.17□□□□□ -1.1
CPSF7-219ENST00000539952 H0YIN7 160 aa8.16□□□□□ -1.1
CPSF7-219ENST00000539952 MAP2P11137 1827 aaKnown RBP8.16□□□□□ -1.1
CPSF7-219ENST00000539952 DDR1Q08345 913 aa8.16□□□□□ -1.1
CPSF7-219ENST00000539952 EIF4A2Q14240 407 aaKnown RBP8.16□□□□□ -1.1
CPSF7-219ENST00000539952 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
CPSF7-219ENST00000539952 CLSPNQ9HAW4 1339 aa8.16□□□□□ -1.1
CPSF7-219ENST00000539952 KIF13BQ9NQT8 1826 aa8.16□□□□□ -1.1
CPSF7-219ENST00000539952 PRDM10Q9NQV6 1147 aa8.16□□□□□ -1.1
CPSF7-219ENST00000539952 SRP68Q9UHB9 627 aaKnown RBP8.16□□□□□ -1.1
CPSF7-219ENST00000539952 KDRP35968 1356 aa8.15□□□□□ -1.1
CPSF7-219ENST00000539952 POTECB2RU33 542 aa8.15□□□□□ -1.1
CPSF7-219ENST00000539952 SERPINB2P05120 415 aa8.15□□□□□ -1.1
CPSF7-219ENST00000539952 USPL1Q5W0Q7 1092 aa8.15□□□□□ -1.1
CPSF7-219ENST00000539952 ZNF530Q6P9A1 599 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-219ENST00000539952 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
CPSF7-219ENST00000539952 NARFQ9UHQ1 456 aa8.15□□□□□ -1.1
CPSF7-219ENST00000539952 N4BP2Q86UW6 1770 aaPredicted RBP8.15□□□□□ -1.11
CPSF7-219ENST00000539952 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.11
CPSF7-219ENST00000539952 GTF3C3Q9Y5Q9 886 aa8.14□□□□□ -1.11
CPSF7-219ENST00000539952 C4AP0C0L4 1744 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 CTCFP49711 727 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-219ENST00000539952 NUBP1P53384 320 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 RASSF7Q02833 373 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 NFIXQ14938 502 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 ERFEQ4G0M1 354 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 C2CD5Q86YS7 1000 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 AIDAQ96BJ3 306 aa8.13□□□□□ -1.11
CPSF7-219ENST00000539952 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-219ENST00000539952 A0A087WZG4 1122 aa8.12□□□□□ -1.11
CPSF7-219ENST00000539952 RGL2O15211 777 aa8.12□□□□□ -1.11
CPSF7-219ENST00000539952 PDE6BP35913 854 aa8.12□□□□□ -1.11
CPSF7-219ENST00000539952 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
CPSF7-219ENST00000539952 CIZ1Q9ULV3 898 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-219ENST00000539952 ARFGEF1Q9Y6D6 1849 aa8.12□□□□□ -1.11
CPSF7-219ENST00000539952 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
CPSF7-219ENST00000539952 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 FOXN1O15353 648 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 CYP19A1P11511 503 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-219ENST00000539952 TNNT2P45379 298 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-219ENST00000539952 AKAP4Q5JQC9 854 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 DNAJC10Q8IXB1 793 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 VSIG10Q8N0Z9 540 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.112e-6■□□□□ 9.3
CPSF7-219ENST00000539952 BRIP1Q9BX63 1249 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 KIAA1551Q9HCM1 1747 aa8.11□□□□□ -1.11
CPSF7-219ENST00000539952 SOS1Q07889 1333 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-219ENST00000539952 TMEM88BA6NKF7 163 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 NFKBIEO00221 500 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 C21orf2O43822 256 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 ECM2O94769 699 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-219ENST00000539952 SOGA3Q5TF21 947 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 CNKSR1Q969H4 720 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 TEX13AQ9BXU3 409 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-219ENST00000539952 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 WBP1LQ9NX94 342 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 SBF1O95248 1867 aa8.1□□□□□ -1.11
CPSF7-219ENST00000539952 LTBP3Q9NS15 1303 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.11
CPSF7-219ENST00000539952 DDNO94850 711 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-219ENST00000539952 STARD3NLO95772 234 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-219ENST00000539952 DEFB115Q30KQ5 88 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 SULT6B1Q6IMI4 303 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 NPM2Q86SE8 214 aaKnown RBP8.09□□□□□ -1.11
CPSF7-219ENST00000539952 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 RASEFQ8IZ41 740 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
CPSF7-219ENST00000539952 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.11
CPSF7-219ENST00000539952 CNTNAP1P78357 1384 aa8.09□□□□□ -1.12
CPSF7-219ENST00000539952 TNRC6CQ9HCJ0 1690 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms