RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 PHLPP1O60346 1717 aa21.37■■□□□ 1.01
LTBR-207ENST00000539925 BEND3Q5T5X7 828 aa21.37■■□□□ 1.01
LTBR-207ENST00000539925 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
LTBR-207ENST00000539925 USP44Q9H0E7 712 aa21.36■■□□□ 1.01
LTBR-207ENST00000539925 THRAP3Q9Y2W1 955 aaKnown RBP21.36■■□□□ 1.01
LTBR-207ENST00000539925 DISP2A7MBM2 1401 aa21.35■■□□□ 1.01
LTBR-207ENST00000539925 BMP2KLQ5H9B9 411 aa21.35■■□□□ 1.01
LTBR-207ENST00000539925 ADCY9O60503 1353 aa21.34■■□□□ 1.01
LTBR-207ENST00000539925 PLCH1Q4KWH8 1693 aa21.34■■□□□ 1.01
LTBR-207ENST00000539925 LINS1Q8NG48 757 aa21.34■■□□□ 1.01
LTBR-207ENST00000539925 DDX54Q8TDD1 881 aaKnown RBP21.34■■□□□ 1.01
LTBR-207ENST00000539925 PDIA6Q15084 440 aa21.33■■□□□ 1
LTBR-207ENST00000539925 MAP3K2Q9Y2U5 619 aa21.32■■□□□ 1
LTBR-207ENST00000539925 NEXNQ0ZGT2 675 aa21.31■■□□□ 1
LTBR-207ENST00000539925 SHANK3Q9BYB0 1731 aa21.31■■□□□ 1
LTBR-207ENST00000539925 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
LTBR-207ENST00000539925 TNS2Q63HR2 1409 aa21.3■■□□□ 1
LTBR-207ENST00000539925 PROSER3Q2NL68 480 aa21.3■■□□□ 1
LTBR-207ENST00000539925 NPM2Q86SE8 214 aaKnown RBP21.3■■□□□ 1
LTBR-207ENST00000539925 TEX13AQ9BXU3 409 aaPredicted RBP21.3■■□□□ 1
LTBR-207ENST00000539925 LRRFIP2Q9Y608 721 aaKnown RBP21.3■■□□□ 1
LTBR-207ENST00000539925 LRP6O75581 1613 aa21.29■■□□□ 1
LTBR-207ENST00000539925 LAMB4A4D0S4 1761 aa21.29■■□□□ 1
LTBR-207ENST00000539925 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
LTBR-207ENST00000539925 EXOC5O00471 708 aa21.29■■□□□ 1
LTBR-207ENST00000539925 ANXA1P04083 346 aa21.29■■□□□ 1
LTBR-207ENST00000539925 HSP90AB4PQ58FF6 505 aa21.28■■□□□ 1
LTBR-207ENST00000539925 RIC3Q7Z5B4 369 aa21.28■■□□□ 1
LTBR-207ENST00000539925 SSH3Q8TE77 659 aa21.28■■□□□ 1
LTBR-207ENST00000539925 USP35Q9P2H5 1018 aa21.28■■□□□ 1
LTBR-207ENST00000539925 PAPPAQ13219 1627 aa21.28■■□□□ 1
LTBR-207ENST00000539925 C5P01031 1676 aa21.28■■□□□ 1
LTBR-207ENST00000539925 RAB11FIP3O75154 756 aa21.28■■□□□ 1
LTBR-207ENST00000539925 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
LTBR-207ENST00000539925 C9orf78Q9NZ63 289 aaPredicted RBP21.28■■□□□ 1
LTBR-207ENST00000539925 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
LTBR-207ENST00000539925 UTYO14607 1347 aa21.27■■□□□ 1
LTBR-207ENST00000539925 MTX1Q13505 466 aa21.27■■□□□ 1
LTBR-207ENST00000539925 USP16Q9Y5T5 823 aa21.27■■□□□ 1
LTBR-207ENST00000539925 ERICH6Q7L0X2 663 aa21.26■□□□□ 0.99
LTBR-207ENST00000539925 UBAP1LF5GYI3 381 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 PIP4K2BP78356 416 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 POLA2Q14181 598 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 ANKRD13DQ6ZTN6 518 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 PLEKHM2Q8IWE5 1019 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 XAGE3Q8WTP9 111 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 METTL22Q9BUU2 404 aaPredicted RBP21.25■□□□□ 0.99
LTBR-207ENST00000539925 LRRCC1Q9C099 1032 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 NWD2Q9ULI1 1742 aa21.25■□□□□ 0.99
LTBR-207ENST00000539925 COPS6Q7L5N1 327 aa21.24■□□□□ 0.99
LTBR-207ENST00000539925 LRP10Q7Z4F1 713 aa21.24■□□□□ 0.99
LTBR-207ENST00000539925 KCPQ6ZWJ8 1503 aa21.24■□□□□ 0.99
LTBR-207ENST00000539925 SPATA31A1Q5TZJ5 1347 aa21.24■□□□□ 0.99
LTBR-207ENST00000539925 NOP58Q9Y2X3 529 aaKnown RBP21.24■□□□□ 0.99
LTBR-207ENST00000539925 GLI3P10071 1580 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 JCADQ9P266 1359 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 GRM8O00222 908 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 ADAMTS2O95450 1211 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 MYL6BP14649 208 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 AIMP1Q12904 312 aaKnown RBP21.23■□□□□ 0.99
LTBR-207ENST00000539925 PLBD2Q8NHP8 589 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 OSBPL3Q9H4L5 887 aa21.23■□□□□ 0.99
LTBR-207ENST00000539925 PNMA6EA0A0J9YXQ4 647 aa21.22■□□□□ 0.99
LTBR-207ENST00000539925 BARGINQ6ZT62 677 aa21.22■□□□□ 0.99
LTBR-207ENST00000539925 SLIT2O94813 1529 aa21.22■□□□□ 0.99
LTBR-207ENST00000539925 NRAPQ86VF7 1730 aa21.22■□□□□ 0.99
LTBR-207ENST00000539925 NBPF7P0C2Y1 421 aaPredicted RBP21.21■□□□□ 0.99
LTBR-207ENST00000539925 PPP1R42Q7Z4L9 355 aa21.21■□□□□ 0.99
LTBR-207ENST00000539925 WNK3Q9BYP7 1800 aa21.21■□□□□ 0.99
LTBR-207ENST00000539925 TTC22Q5TAA0 569 aa21.21■□□□□ 0.99
LTBR-207ENST00000539925 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
LTBR-207ENST00000539925 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
LTBR-207ENST00000539925 COL15A1P39059 1388 aa21.2■□□□□ 0.98
LTBR-207ENST00000539925 MSH5O43196 834 aa21.2■□□□□ 0.98
LTBR-207ENST00000539925 SRGAP3O43295 1099 aa21.2■□□□□ 0.98
LTBR-207ENST00000539925 STARD3NLO95772 234 aa21.19■□□□□ 0.98
LTBR-207ENST00000539925 TBC1D32Q96NH3 1257 aa21.19■□□□□ 0.98
LTBR-207ENST00000539925 DAXXQ9UER7 740 aaPredicted RBP21.19■□□□□ 0.98
LTBR-207ENST00000539925 AOX1Q06278 1338 aa21.19■□□□□ 0.98
LTBR-207ENST00000539925 BCL9O00512 1426 aa21.19■□□□□ 0.98
LTBR-207ENST00000539925 NEURL1BA8MQ27 555 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 CDC45O75419 566 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 DDB1Q16531 1140 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 ERC1Q8IUD2 1116 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 PIGBQ92521 554 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 EXOC6BQ9Y2D4 811 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 GCKRQ14397 625 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 KIF1BPQ96EK5 621 aa21.18■□□□□ 0.98
LTBR-207ENST00000539925 NUTM2BA6NNL0 878 aaPredicted RBP21.17■□□□□ 0.98
LTBR-207ENST00000539925 NUTM2EB1AL46 878 aaPredicted RBP21.17■□□□□ 0.98
LTBR-207ENST00000539925 PTCD1O75127 700 aaKnown RBP21.17■□□□□ 0.98
LTBR-207ENST00000539925 CWF19L2Q2TBE0 894 aaKnown RBP21.17■□□□□ 0.98
LTBR-207ENST00000539925 NUTM2AQ8IVF1 878 aaPredicted RBP21.17■□□□□ 0.98
LTBR-207ENST00000539925 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
LTBR-207ENST00000539925 SURF6O75683 361 aaKnown RBP21.16■□□□□ 0.98
LTBR-207ENST00000539925 SEC24BO95487 1268 aa21.16■□□□□ 0.98
LTBR-207ENST00000539925 IGKV5-2P06315 115 aa21.16■□□□□ 0.98
LTBR-207ENST00000539925 MYD88Q99836 296 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms