RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SBF2Q86WG5 1849 aa9.82□□□□□ -0.84
CCDC60-204ENST00000539847 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
CCDC60-204ENST00000539847 EXOC5O00471 708 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 GABBR2O75899 941 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 SLC15A2Q16348 729 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 TXNRD1Q16881 649 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
CCDC60-204ENST00000539847 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 DDX12PQ92771 950 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 LAS1LQ9Y4W2 734 aaKnown RBP9.81□□□□□ -0.84
CCDC60-204ENST00000539847 TNS2Q63HR2 1409 aa9.81□□□□□ -0.84
CCDC60-204ENST00000539847 QRICH2Q9H0J4 1663 aa9.8□□□□□ -0.84
CCDC60-204ENST00000539847 TRPM1Q7Z4N2 1603 aa9.8□□□□□ -0.84
CCDC60-204ENST00000539847 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
CCDC60-204ENST00000539847 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 SBNO2Q9Y2G9 1366 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 SEC24BO95487 1268 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 FLIIQ13045 1269 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
CCDC60-204ENST00000539847 ZNF784Q8NCA9 323 aaPredicted RBP9.79□□□□□ -0.84
CCDC60-204ENST00000539847 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 SYT17Q9BSW7 474 aa9.79□□□□□ -0.84
CCDC60-204ENST00000539847 NPC1L1Q9UHC9 1359 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 NFAT5O94916 1531 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 WNK3Q9BYP7 1800 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 ZBTB7AO95365 584 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
CCDC60-204ENST00000539847 PTF1AQ7RTS3 328 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 ERBB3P21860 1342 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 ZNF521Q96K83 1311 aa9.78□□□□□ -0.84
CCDC60-204ENST00000539847 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
CCDC60-204ENST00000539847 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
CCDC60-204ENST00000539847 FECHP22830 423 aa9.77□□□□□ -0.85
CCDC60-204ENST00000539847 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
CCDC60-204ENST00000539847 FRAT1Q92837 279 aaPredicted RBP9.77□□□□□ -0.85
CCDC60-204ENST00000539847 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
CCDC60-204ENST00000539847 FHDC1Q9C0D6 1143 aaPredicted RBP9.77□□□□□ -0.85
CCDC60-204ENST00000539847 PDGFDQ9GZP0 370 aaPredicted RBP9.77□□□□□ -0.85
CCDC60-204ENST00000539847 UTRNP46939 3433 aa9.77□□□□□ -0.85
CCDC60-204ENST00000539847 AKAP12Q02952 1782 aa9.76□□□□□ -0.85
CCDC60-204ENST00000539847 C8orf34Q49A92 452 aa9.76□□□□□ -0.85
CCDC60-204ENST00000539847 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
CCDC60-204ENST00000539847 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
CCDC60-204ENST00000539847 CDCA7LQ96GN5 454 aa9.76□□□□□ -0.85
CCDC60-204ENST00000539847 MYOM1P52179 1685 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 NHSQ6T4R5 1651 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 APBB1O00213 710 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 IRF6O14896 467 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 EVI5O60447 810 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 IL2RBP14784 551 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 HMGB2P26583 209 aaKnown RBP9.75□□□□□ -0.85
CCDC60-204ENST00000539847 TMF1P82094 1093 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 CDCA8Q53HL2 280 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 SLC27A3Q5K4L6 730 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 DUSP27Q5VZP5 1158 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 PUS7Q96PZ0 661 aaKnown RBP9.75□□□□□ -0.85
CCDC60-204ENST00000539847 TESK2Q96S53 571 aa9.75□□□□□ -0.85
CCDC60-204ENST00000539847 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 TBC1D12O60347 775 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 PDE3AQ14432 1141 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 BECN1Q14457 450 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 AMHR2Q16671 573 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 DCBLD2Q96PD2 775 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
CCDC60-204ENST00000539847 GNPATO15228 680 aa9.73□□□□□ -0.85
CCDC60-204ENST00000539847 SLFN5Q08AF3 891 aa9.73□□□□□ -0.85
CCDC60-204ENST00000539847 NLRP2Q9NX02 1062 aa9.73□□□□□ -0.85
CCDC60-204ENST00000539847 BRPF3Q9ULD4 1205 aa9.73□□□□□ -0.85
CCDC60-204ENST00000539847 MAPK8IP3Q9UPT6 1336 aa9.73□□□□□ -0.85
CCDC60-204ENST00000539847 FCHSD2O94868 740 aa9.72□□□□□ -0.85
CCDC60-204ENST00000539847 C1QTNF8P60827 252 aa9.72□□□□□ -0.85
CCDC60-204ENST00000539847 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
CCDC60-204ENST00000539847 PANK3Q9H999 370 aa9.72□□□□□ -0.85
CCDC60-204ENST00000539847 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
CCDC60-204ENST00000539847 CHD4Q14839 1912 aa9.72□□□□□ -0.85
CCDC60-204ENST00000539847 POLD1P28340 1107 aa9.71□□□□□ -0.86
CCDC60-204ENST00000539847 HIC1Q14526 733 aa9.71□□□□□ -0.86
CCDC60-204ENST00000539847 TERF2IPQ9NYB0 399 aa9.71□□□□□ -0.86
CCDC60-204ENST00000539847 ISY1Q9ULR0 285 aaKnown RBP9.71□□□□□ -0.86
CCDC60-204ENST00000539847 CGNL1Q0VF96 1302 aa9.71□□□□□ -0.86
CCDC60-204ENST00000539847 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 PLIN1O60240 522 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 HDGFL2Q7Z4V5 671 aaPredicted RBP9.7□□□□□ -0.86
CCDC60-204ENST00000539847 ANKRD24Q8TF21 1146 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 PTCD2Q8WV60 388 aaKnown RBP9.7□□□□□ -0.86
CCDC60-204ENST00000539847 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 IP6K1Q92551 441 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 LRRC4BQ9NT99 713 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 ADAMTS8Q9UP79 889 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 CD163L1Q9NR16 1453 aa9.7□□□□□ -0.86
CCDC60-204ENST00000539847 E9PSI1 815 aa9.69□□□□□ -0.86
CCDC60-204ENST00000539847 PTGDRQ13258 359 aa9.69□□□□□ -0.86
CCDC60-204ENST00000539847 WDR43Q15061 677 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC60-204ENST00000539847 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
CCDC60-204ENST00000539847 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
CCDC60-204ENST00000539847 QSER1Q2KHR3 1735 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms