RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
SPARC-209ENST00000539687 ALDH1L1O75891 902 aa12.63□□□□□ -0.39
SPARC-209ENST00000539687 UBTFL1P0CB47 393 aaPredicted RBP12.63□□□□□ -0.39
SPARC-209ENST00000539687 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
SPARC-209ENST00000539687 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
SPARC-209ENST00000539687 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
SPARC-209ENST00000539687 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
SPARC-209ENST00000539687 ROBO1Q9Y6N7 1651 aa12.63□□□□□ -0.39
SPARC-209ENST00000539687 KDM6AO15550 1401 aaPredicted RBP12.62□□□□□ -0.39
SPARC-209ENST00000539687 F6X3S4 739 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
SPARC-209ENST00000539687 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPARC-209ENST00000539687 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
SPARC-209ENST00000539687 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
SPARC-209ENST00000539687 ATP8B2P98198 1209 aa12.61□□□□□ -0.39
SPARC-209ENST00000539687 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
SPARC-209ENST00000539687 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
SPARC-209ENST00000539687 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
SPARC-209ENST00000539687 ERVV-2B6SEH9 535 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
SPARC-209ENST00000539687 IL2RBP14784 551 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 CABP4P57796 275 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 EVA1CP58658 441 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 ZCRB1Q8TBF4 217 aaKnown RBP12.6□□□□□ -0.39
SPARC-209ENST00000539687 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
SPARC-209ENST00000539687 CDC45O75419 566 aa12.59□□□□□ -0.39
SPARC-209ENST00000539687 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
SPARC-209ENST00000539687 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
SPARC-209ENST00000539687 PHLPP1O60346 1717 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 BEND3Q5T5X7 828 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 OSBPL3Q9H4L5 887 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
SPARC-209ENST00000539687 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
SPARC-209ENST00000539687 AOX1Q06278 1338 aa12.58□□□□□ -0.4
SPARC-209ENST00000539687 PI4KAP2A4QPH2 592 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 CYP27B1O15528 508 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 KCNQ3O43525 872 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 LARP1Q6PKG0 1096 aaKnown RBP12.57□□□□□ -0.4
SPARC-209ENST00000539687 PI4KAP1Q8N8J0 262 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
SPARC-209ENST00000539687 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 USP44Q9H0E7 712 aa12.57□□□□□ -0.4
SPARC-209ENST00000539687 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
SPARC-209ENST00000539687 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
SPARC-209ENST00000539687 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
SPARC-209ENST00000539687 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
SPARC-209ENST00000539687 ADCY9O60503 1353 aa12.56□□□□□ -0.4
SPARC-209ENST00000539687 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
SPARC-209ENST00000539687 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
SPARC-209ENST00000539687 MTX1Q13505 466 aa12.55□□□□□ -0.4
SPARC-209ENST00000539687 ERC1Q8IUD2 1116 aa12.55□□□□□ -0.4
SPARC-209ENST00000539687 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
SPARC-209ENST00000539687 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
SPARC-209ENST00000539687 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
SPARC-209ENST00000539687 POLA2Q14181 598 aa12.54□□□□□ -0.4
SPARC-209ENST00000539687 IL27Q8NEV9 243 aa12.54□□□□□ -0.4
SPARC-209ENST00000539687 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
SPARC-209ENST00000539687 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
SPARC-209ENST00000539687 UTYO14607 1347 aa12.54□□□□□ -0.4
SPARC-209ENST00000539687 SEC24BO95487 1268 aa12.53□□□□□ -0.4
SPARC-209ENST00000539687 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
SPARC-209ENST00000539687 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
SPARC-209ENST00000539687 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
SPARC-209ENST00000539687 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
SPARC-209ENST00000539687 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
SPARC-209ENST00000539687 JCADQ9P266 1359 aa12.53□□□□□ -0.4
SPARC-209ENST00000539687 PAPPAQ13219 1627 aa12.52□□□□□ -0.4
SPARC-209ENST00000539687 ZNF496Q96IT1 587 aaPredicted RBP12.52□□□□□ -0.41
SPARC-209ENST00000539687 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
SPARC-209ENST00000539687 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
SPARC-209ENST00000539687 COL15A1P39059 1388 aa12.52□□□□□ -0.41
SPARC-209ENST00000539687 LRP6O75581 1613 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 C5P01031 1676 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 GRM8O00222 908 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 REC8O95072 547 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 MX1P20591 662 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
SPARC-209ENST00000539687 STAP2Q9UGK3 403 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
SPARC-209ENST00000539687 PNMA6EA0A0J9YXQ4 647 aa12.5□□□□□ -0.41
SPARC-209ENST00000539687 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
SPARC-209ENST00000539687 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
SPARC-209ENST00000539687 PDE1AP54750 535 aa12.5□□□□□ -0.41
SPARC-209ENST00000539687 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
SPARC-209ENST00000539687 PDIA6Q15084 440 aa12.5□□□□□ -0.41
SPARC-209ENST00000539687 ANKRD13DQ6ZTN6 518 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms