RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ADAMTSL3P82987 1691 aa11.69□□□□□ -0.54
CDH13-204ENST00000539548 TCHHQ07283 1943 aa11.69□□□□□ -0.54
CDH13-204ENST00000539548 POLA2Q14181 598 aa11.69□□□□□ -0.54
CDH13-204ENST00000539548 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
CDH13-204ENST00000539548 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
CDH13-204ENST00000539548 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
CDH13-204ENST00000539548 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
CDH13-204ENST00000539548 RNF214Q8ND24 703 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 PIK3C2AO00443 1686 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 SGSM2O43147 1006 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
CDH13-204ENST00000539548 LTKP29376 864 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 IL25Q9H293 177 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 RGPD8O14715 1765 aaPredicted RBP11.68□□□□□ -0.54
CDH13-204ENST00000539548 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
CDH13-204ENST00000539548 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
CDH13-204ENST00000539548 IL1RAPL2Q9NP60 686 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 RAD50Q92878 1312 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
CDH13-204ENST00000539548 PPP1R42Q7Z4L9 355 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 TTC14Q96N46 770 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 MAP7D2Q96T17 732 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 SNX14Q9Y5W7 946 aa11.67□□□□□ -0.54
CDH13-204ENST00000539548 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
CDH13-204ENST00000539548 SURF6O75683 361 aaKnown RBP11.66□□□□□ -0.54
CDH13-204ENST00000539548 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
CDH13-204ENST00000539548 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
CDH13-204ENST00000539548 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.54
CDH13-204ENST00000539548 HOXC9P31274 260 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 KIF1BPQ96EK5 621 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 CCDC183Q5T5S1 534 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 HDGFL1Q5TGJ6 251 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 PHAXQ9H814 394 aaKnown RBP11.65□□□□□ -0.54
CDH13-204ENST00000539548 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 AMOTL2Q9Y2J4 779 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 CRYBG1Q9Y4K1 1723 aa11.65□□□□□ -0.54
CDH13-204ENST00000539548 USP54Q70EL1 1684 aa11.65□□□□□ -0.55
CDH13-204ENST00000539548 DIP2AQ14689 1571 aa11.65□□□□□ -0.55
CDH13-204ENST00000539548 USP42Q9H9J4 1324 aaKnown RBP11.64□□□□□ -0.55
CDH13-204ENST00000539548 MARF1Q9Y4F3 1742 aaKnown RBP11.64□□□□□ -0.55
CDH13-204ENST00000539548 UQCRHLA0A096LP55 91 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
CDH13-204ENST00000539548 UQCRHP07919 91 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 NLRP6P59044 892 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 SASS6Q6UVJ0 657 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
CDH13-204ENST00000539548 AK2P54819 239 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
CDH13-204ENST00000539548 HSP90AB4PQ58FF6 505 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
CDH13-204ENST00000539548 SLC26A8Q96RN1 970 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 TBX22Q9Y458 520 aa11.64□□□□□ -0.55
CDH13-204ENST00000539548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDH13-204ENST00000539548 SRGAP3O43295 1099 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 STX6O43752 255 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
CDH13-204ENST00000539548 SYT1P21579 422 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 UBE2HP62256 183 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 RBM10P98175 930 aaKnown RBP11.63□□□□□ -0.55
CDH13-204ENST00000539548 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 CNPY2Q9Y2B0 182 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 ATP6V1DQ9Y5K8 247 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
CDH13-204ENST00000539548 F13A1P00488 732 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 HOXB7P09629 217 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 BEND3Q5T5X7 828 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 MTERF4Q7Z6M4 381 aaKnown RBP11.62□□□□□ -0.55
CDH13-204ENST00000539548 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 CEMIPQ8WUJ3 1361 aa11.62□□□□□ -0.55
CDH13-204ENST00000539548 GLRX3O76003 335 aaKnown RBP11.61□□□□□ -0.55
CDH13-204ENST00000539548 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
CDH13-204ENST00000539548 RUFY2Q8WXA3 655 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 KCNB2Q92953 911 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 ANKARQ7Z5J8 1434 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
CDH13-204ENST00000539548 DNAAF4Q8WXU2 420 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
CDH13-204ENST00000539548 TM6SF1Q9BZW5 370 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 FAM13BQ9NYF5 915 aa11.61□□□□□ -0.55
CDH13-204ENST00000539548 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 MTX1Q13505 466 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 VPS53Q5VIR6 699 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms