RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 ELL2O00472 640 aaPredicted RBP15.95■□□□□ 0.14
LMO3-221ENST00000539534 BAG6P46379 1132 aa15.95■□□□□ 0.14
LMO3-221ENST00000539534 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
LMO3-221ENST00000539534 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
LMO3-221ENST00000539534 STARD3NLO95772 234 aa15.94■□□□□ 0.14
LMO3-221ENST00000539534 MS4A1P11836 297 aa15.94■□□□□ 0.14
LMO3-221ENST00000539534 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
LMO3-221ENST00000539534 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
LMO3-221ENST00000539534 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
LMO3-221ENST00000539534 RGPD3A6NKT7 1758 aaPredicted RBP15.94■□□□□ 0.14
LMO3-221ENST00000539534 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
LMO3-221ENST00000539534 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
LMO3-221ENST00000539534 KCNQ4P56696 695 aa15.93■□□□□ 0.14
LMO3-221ENST00000539534 PDIA6Q15084 440 aa15.93■□□□□ 0.14
LMO3-221ENST00000539534 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
LMO3-221ENST00000539534 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
LMO3-221ENST00000539534 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
LMO3-221ENST00000539534 IPO8O15397 1037 aaKnown RBP15.92■□□□□ 0.14
LMO3-221ENST00000539534 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
LMO3-221ENST00000539534 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
LMO3-221ENST00000539534 LY75O60449 1722 aa15.91■□□□□ 0.14
LMO3-221ENST00000539534 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
LMO3-221ENST00000539534 LRP10Q7Z4F1 713 aa15.91■□□□□ 0.14
LMO3-221ENST00000539534 PTPRCP08575 1304 aa15.91■□□□□ 0.14
LMO3-221ENST00000539534 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
LMO3-221ENST00000539534 C5P01031 1676 aa15.9■□□□□ 0.14
LMO3-221ENST00000539534 NBPF26B4DH59 902 aa15.9■□□□□ 0.14
LMO3-221ENST00000539534 A1BGP04217 495 aa15.9■□□□□ 0.14
LMO3-221ENST00000539534 EIF2S2P20042 333 aaKnown RBP15.9■□□□□ 0.14
LMO3-221ENST00000539534 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
LMO3-221ENST00000539534 NBPF14Q5TI25 921 aa15.9■□□□□ 0.14
LMO3-221ENST00000539534 NBPF10Q6P3W6 841 aaKnown RBP15.9■□□□□ 0.14
LMO3-221ENST00000539534 NBPF15Q8N660 670 aa15.9■□□□□ 0.14
LMO3-221ENST00000539534 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
LMO3-221ENST00000539534 DBF4Q9UBU7 674 aaPredicted RBP15.9■□□□□ 0.14
LMO3-221ENST00000539534 SSH1Q8WYL5 1049 aa15.89■□□□□ 0.13
LMO3-221ENST00000539534 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
LMO3-221ENST00000539534 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
LMO3-221ENST00000539534 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
LMO3-221ENST00000539534 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
LMO3-221ENST00000539534 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
LMO3-221ENST00000539534 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 IL6STP40189 918 aaPredicted RBP15.87■□□□□ 0.13
LMO3-221ENST00000539534 EIF5P55010 431 aaKnown RBP15.87■□□□□ 0.13
LMO3-221ENST00000539534 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 PROSER3Q2NL68 480 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 MRPL50Q8N5N7 158 aaKnown RBP15.87■□□□□ 0.13
LMO3-221ENST00000539534 NECTIN2Q92692 538 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 CHPF2Q9P2E5 772 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 ZBTB1Q9Y2K1 713 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 TJP1Q07157 1748 aa15.87■□□□□ 0.13
LMO3-221ENST00000539534 RREB1Q92766 1687 aa15.86■□□□□ 0.13
LMO3-221ENST00000539534 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
LMO3-221ENST00000539534 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
LMO3-221ENST00000539534 NEFLP07196 543 aa15.86■□□□□ 0.13
LMO3-221ENST00000539534 ERICH6BQ5W0A0 696 aa15.86■□□□□ 0.13
LMO3-221ENST00000539534 ZKSCAN2Q63HK3 967 aa15.86■□□□□ 0.13
LMO3-221ENST00000539534 API5Q9BZZ5 524 aaKnown RBP15.86■□□□□ 0.13
LMO3-221ENST00000539534 AAMPQ13685 434 aa15.85■□□□□ 0.13
LMO3-221ENST00000539534 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
LMO3-221ENST00000539534 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
LMO3-221ENST00000539534 TCERG1O14776 1098 aaKnown RBP15.84■□□□□ 0.13
LMO3-221ENST00000539534 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
LMO3-221ENST00000539534 ZNF827Q17R98 1081 aa15.84■□□□□ 0.13
LMO3-221ENST00000539534 AMIGO3Q86WK7 504 aa15.84■□□□□ 0.13
LMO3-221ENST00000539534 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
LMO3-221ENST00000539534 RGL2O15211 777 aa15.83■□□□□ 0.12
LMO3-221ENST00000539534 BCAR3O75815 825 aa15.83■□□□□ 0.12
LMO3-221ENST00000539534 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
LMO3-221ENST00000539534 ANXA1P04083 346 aa15.83■□□□□ 0.12
LMO3-221ENST00000539534 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
LMO3-221ENST00000539534 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
LMO3-221ENST00000539534 AK7Q96M32 723 aa15.83■□□□□ 0.12
LMO3-221ENST00000539534 CHMP4BQ9H444 224 aaKnown RBP15.83■□□□□ 0.12
LMO3-221ENST00000539534 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
LMO3-221ENST00000539534 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
LMO3-221ENST00000539534 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
LMO3-221ENST00000539534 GNPATO15228 680 aa15.82■□□□□ 0.12
LMO3-221ENST00000539534 MYL6BP14649 208 aa15.82■□□□□ 0.12
LMO3-221ENST00000539534 SSFA2P28290 1259 aa15.82■□□□□ 0.12
LMO3-221ENST00000539534 SLC15A2Q16348 729 aa15.82■□□□□ 0.12
LMO3-221ENST00000539534 G2E3Q7L622 706 aa15.82■□□□□ 0.12
LMO3-221ENST00000539534 PHAXQ9H814 394 aaKnown RBP15.82■□□□□ 0.12
LMO3-221ENST00000539534 RTCBQ9Y3I0 505 aaKnown RBP15.82■□□□□ 0.12
LMO3-221ENST00000539534 A0A087WZG4 1122 aa15.81■□□□□ 0.12
LMO3-221ENST00000539534 C4BP0C0L5 1744 aa15.81■□□□□ 0.12
LMO3-221ENST00000539534 FLIIQ13045 1269 aa15.81■□□□□ 0.12
LMO3-221ENST00000539534 COPS6Q7L5N1 327 aa15.81■□□□□ 0.12
LMO3-221ENST00000539534 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
LMO3-221ENST00000539534 FLAD1Q8NFF5 587 aa15.8■□□□□ 0.12
LMO3-221ENST00000539534 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
LMO3-221ENST00000539534 ARHGEF1Q92888 912 aaKnown RBP15.8■□□□□ 0.12
LMO3-221ENST00000539534 BCL2L13Q9BXK5 485 aa15.8■□□□□ 0.12
LMO3-221ENST00000539534 STK32BQ9NY57 414 aa15.8■□□□□ 0.12
LMO3-221ENST00000539534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
LMO3-221ENST00000539534 SOCS7O14512 581 aa15.79■□□□□ 0.12
LMO3-221ENST00000539534 TTLL7Q6ZT98 887 aa15.79■□□□□ 0.12
LMO3-221ENST00000539534 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
LMO3-221ENST00000539534 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
LMO3-221ENST00000539534 TFCP2L1Q9NZI6 479 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms