RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 MX1P20591 662 aa15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 TMEM63CQ9P1W3 806 aa15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 NFAT5O94916 1531 aa15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 IL25Q9H293 177 aa15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 SETD1BQ9UPS6 1966 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 ZDHHC9Q9Y397 364 aa15.32■□□□□ 0.04
SFSWAP-208ENST00000539506 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 PPP1R9BQ96SB3 815 aa15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 PALD1Q9ULE6 856 aa15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 OFD1O75665 1012 aa15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 REC8O95072 547 aa15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 ANXA1P04083 346 aa15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 IL1RAPL2Q9NP60 686 aa15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-208ENST00000539506 UQCRHLA0A096LP55 91 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 UQCRHP07919 91 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 ESYT1Q9BSJ8 1104 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 TPM2P07951 284 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 NBPF7P0C2Y1 421 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 C17orf53Q8N3J3 647 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 PTMAP06454 111 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 NEK4P51957 841 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 PLCB2Q00722 1185 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 CHPF2Q9P2E5 772 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 ISY1Q9ULR0 285 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 RGPD2P0DJD1 1756 aa15.3■□□□□ 0.04
SFSWAP-208ENST00000539506 CHMLP26374 656 aa15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 UBTFL1P0CB47 393 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 SSH3Q8TE77 659 aa15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 RILPL2Q969X0 211 aa15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 CHD2O14647 1828 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 MED1Q15648 1581 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-208ENST00000539506 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 NUTM1Q86Y26 1132 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 PDCL3Q9H2J4 239 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 DNTTIP2Q5QJE6 756 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 MPRIPQ6WCQ1 1025 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 N4BP2Q86UW6 1770 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 SOS1Q07889 1333 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 PSME1Q06323 249 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-208ENST00000539506 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.04
SFSWAP-208ENST00000539506 ST18O60284 1047 aa15.27■□□□□ 0.04
SFSWAP-208ENST00000539506 POLA2Q14181 598 aa15.27■□□□□ 0.04
SFSWAP-208ENST00000539506 CACNA1FO60840 1977 aa15.27■□□□□ 0.03
SFSWAP-208ENST00000539506 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.03
SFSWAP-208ENST00000539506 BEND3Q5T5X7 828 aa15.27■□□□□ 0.03
SFSWAP-208ENST00000539506 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.03
SFSWAP-208ENST00000539506 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.03
SFSWAP-208ENST00000539506 MAP4K4O95819 1239 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 NUCB2P80303 420 aa15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 PXDNQ92626 1479 aa15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 PRAMEF22A3QJZ6 481 aa15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
SFSWAP-208ENST00000539506 SURF6O75683 361 aaKnown RBP15.25■□□□□ 0.03
SFSWAP-208ENST00000539506 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
SFSWAP-208ENST00000539506 ADCY9O60503 1353 aa15.25■□□□□ 0.03
SFSWAP-208ENST00000539506 GADD45BO75293 160 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 PI4K2BQ8TCG2 481 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 ANO2Q9NQ90 1003 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 ZNF445P59923 1031 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
SFSWAP-208ENST00000539506 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 GCP02774 474 aa15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 DNAAF4Q8WXU2 420 aa15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 CWC22Q9HCG8 908 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 ADGRL3Q9HAR2 1447 aa15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 NOL7Q9UMY1 257 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-208ENST00000539506 ARHGEF25Q86VW2 580 aa15.22■□□□□ 0.03
SFSWAP-208ENST00000539506 PTMSP20962 102 aa15.21■□□□□ 0.03
SFSWAP-208ENST00000539506 KCNH5Q8NCM2 988 aa15.21■□□□□ 0.03
SFSWAP-208ENST00000539506 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-208ENST00000539506 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-208ENST00000539506 TEFQ10587 303 aa15.21■□□□□ 0.02
SFSWAP-208ENST00000539506 ZHX1Q9UKY1 873 aaPredicted RBP15.21■□□□□ 0.02
SFSWAP-208ENST00000539506 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.02
SFSWAP-208ENST00000539506 HOXB7P09629 217 aa15.2■□□□□ 0.02
SFSWAP-208ENST00000539506 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
SFSWAP-208ENST00000539506 LRSAM1Q6UWE0 723 aa15.2■□□□□ 0.02
SFSWAP-208ENST00000539506 TTC12Q9H892 705 aaPredicted RBP15.2■□□□□ 0.02
SFSWAP-208ENST00000539506 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 CUL4AQ13619 759 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
SFSWAP-208ENST00000539506 AOX1Q06278 1338 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms