RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 KDM3BQ7LBC6 1761 aa11.89□□□□□ -0.51
RTN4IP1-204ENST00000539449 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
RTN4IP1-204ENST00000539449 PLIN1O60240 522 aa11.88□□□□□ -0.51
RTN4IP1-204ENST00000539449 BCAR3O75815 825 aa11.88□□□□□ -0.51
RTN4IP1-204ENST00000539449 TOGARAM1Q9Y4F4 1720 aa11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 KCNQ3O43525 872 aa11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 RRP1P56182 461 aaKnown RBP11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 FKBP8Q14318 412 aa11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 TAF7Q15545 349 aaPredicted RBP11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
RTN4IP1-204ENST00000539449 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
RTN4IP1-204ENST00000539449 VAMP4O75379 141 aa11.86□□□□□ -0.51
RTN4IP1-204ENST00000539449 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
RTN4IP1-204ENST00000539449 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
RTN4IP1-204ENST00000539449 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
RTN4IP1-204ENST00000539449 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
RTN4IP1-204ENST00000539449 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
RTN4IP1-204ENST00000539449 BCL2L13Q9BXK5 485 aa11.85□□□□□ -0.51
RTN4IP1-204ENST00000539449 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
RTN4IP1-204ENST00000539449 BTAF1O14981 1849 aa11.85□□□□□ -0.51
RTN4IP1-204ENST00000539449 PNPLA7Q6ZV29 1317 aa11.85□□□□□ -0.51
RTN4IP1-204ENST00000539449 ITGB4P16144 1822 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 SSH1Q8WYL5 1049 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 PCDH11XQ9BZA7 1347 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 PCDH11YQ9BZA8 1340 aa11.84□□□□□ -0.51
RTN4IP1-204ENST00000539449 PCNTO95613 3336 aa11.83□□□□□ -0.52
RTN4IP1-204ENST00000539449 TOMM70O94826 608 aa11.83□□□□□ -0.52
RTN4IP1-204ENST00000539449 TEFQ10587 303 aa11.83□□□□□ -0.52
RTN4IP1-204ENST00000539449 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
RTN4IP1-204ENST00000539449 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
RTN4IP1-204ENST00000539449 MRC1P22897 1456 aa11.83□□□□□ -0.52
RTN4IP1-204ENST00000539449 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 HTRA3P83110 453 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 ACSBG1Q96GR2 724 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
RTN4IP1-204ENST00000539449 TNS2Q63HR2 1409 aa11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 EXOC5O00471 708 aa11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 NEFLP07196 543 aa11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 EIF4A1P60842 406 aaKnown RBP11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
RTN4IP1-204ENST00000539449 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
RTN4IP1-204ENST00000539449 CABP4P57796 275 aa11.8□□□□□ -0.52
RTN4IP1-204ENST00000539449 C5P01031 1676 aa11.8□□□□□ -0.52
RTN4IP1-204ENST00000539449 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
RTN4IP1-204ENST00000539449 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
RTN4IP1-204ENST00000539449 EXOC6Q8TAG9 804 aa11.79□□□□□ -0.52
RTN4IP1-204ENST00000539449 FRAT1Q92837 279 aaPredicted RBP11.79□□□□□ -0.52
RTN4IP1-204ENST00000539449 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
RTN4IP1-204ENST00000539449 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
RTN4IP1-204ENST00000539449 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
RTN4IP1-204ENST00000539449 ALDH1L2Q3SY69 923 aa11.78□□□□□ -0.52
RTN4IP1-204ENST00000539449 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
RTN4IP1-204ENST00000539449 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
RTN4IP1-204ENST00000539449 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
RTN4IP1-204ENST00000539449 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.52
RTN4IP1-204ENST00000539449 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
RTN4IP1-204ENST00000539449 RLBP1P12271 317 aa11.77□□□□□ -0.53
RTN4IP1-204ENST00000539449 DSG3P32926 999 aa11.77□□□□□ -0.53
RTN4IP1-204ENST00000539449 G2E3Q7L622 706 aa11.77□□□□□ -0.53
RTN4IP1-204ENST00000539449 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
RTN4IP1-204ENST00000539449 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
RTN4IP1-204ENST00000539449 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
RTN4IP1-204ENST00000539449 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
RTN4IP1-204ENST00000539449 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
RTN4IP1-204ENST00000539449 BRPF1P55201 1214 aaPredicted RBP11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 PIGBQ92521 554 aa11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 CLUAP1Q96AJ1 413 aa11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 ZNF428Q96B54 188 aa11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 KCPQ6ZWJ8 1503 aa11.75□□□□□ -0.53
RTN4IP1-204ENST00000539449 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 TRIM27P14373 513 aa11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 ZKSCAN2Q63HK3 967 aa11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
RTN4IP1-204ENST00000539449 ANXA1P04083 346 aa11.73□□□□□ -0.53
RTN4IP1-204ENST00000539449 KCNQ4P56696 695 aa11.73□□□□□ -0.53
RTN4IP1-204ENST00000539449 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
RTN4IP1-204ENST00000539449 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms