RNA–Protein interactions for RNA: ENST00000539365.1

PTPN6-213, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-213ENST00000539365 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
PTPN6-213ENST00000539365 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
PTPN6-213ENST00000539365 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
PTPN6-213ENST00000539365 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
PTPN6-213ENST00000539365 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
PTPN6-213ENST00000539365 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
PTPN6-213ENST00000539365 TM4SF1P30408 202 aa18.22■□□□□ 0.51
PTPN6-213ENST00000539365 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
PTPN6-213ENST00000539365 DCTN1Q14203 1278 aa18.22■□□□□ 0.51
PTPN6-213ENST00000539365 COL15A1P39059 1388 aa18.21■□□□□ 0.51
PTPN6-213ENST00000539365 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
PTPN6-213ENST00000539365 KCNQ3O43525 872 aa18.21■□□□□ 0.51
PTPN6-213ENST00000539365 IL6STP40189 918 aaPredicted RBP18.21■□□□□ 0.51
PTPN6-213ENST00000539365 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
PTPN6-213ENST00000539365 ZNF784Q8NCA9 323 aaPredicted RBP18.21■□□□□ 0.51
PTPN6-213ENST00000539365 TJP1Q07157 1748 aa18.2■□□□□ 0.5
PTPN6-213ENST00000539365 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
PTPN6-213ENST00000539365 POLRMTO00411 1230 aaKnown RBP18.18■□□□□ 0.5
PTPN6-213ENST00000539365 A1BGP04217 495 aa18.18■□□□□ 0.5
PTPN6-213ENST00000539365 DDR1Q08345 913 aa18.18■□□□□ 0.5
PTPN6-213ENST00000539365 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
PTPN6-213ENST00000539365 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
PTPN6-213ENST00000539365 DPEP1P16444 411 aa18.17■□□□□ 0.5
PTPN6-213ENST00000539365 NFIXQ14938 502 aa18.17■□□□□ 0.5
PTPN6-213ENST00000539365 C10orf71Q711Q0 1435 aa18.16■□□□□ 0.5
PTPN6-213ENST00000539365 SERPINB2P05120 415 aa18.16■□□□□ 0.5
PTPN6-213ENST00000539365 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTPN6-213ENST00000539365 PIM2Q9P1W9 311 aa18.16■□□□□ 0.5
PTPN6-213ENST00000539365 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
PTPN6-213ENST00000539365 TBC1D2BQ9UPU7 963 aa18.16■□□□□ 0.5
PTPN6-213ENST00000539365 BCS1LQ9Y276 419 aa18.16■□□□□ 0.5
PTPN6-213ENST00000539365 RIPK4P57078 832 aa18.15■□□□□ 0.5
PTPN6-213ENST00000539365 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
PTPN6-213ENST00000539365 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
PTPN6-213ENST00000539365 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
PTPN6-213ENST00000539365 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.5
PTPN6-213ENST00000539365 CHD4Q14839 1912 aa18.14■□□□□ 0.49
PTPN6-213ENST00000539365 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
PTPN6-213ENST00000539365 C4AP0C0L4 1744 aa18.14■□□□□ 0.49
PTPN6-213ENST00000539365 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.49
PTPN6-213ENST00000539365 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.49
PTPN6-213ENST00000539365 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
PTPN6-213ENST00000539365 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
PTPN6-213ENST00000539365 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
PTPN6-213ENST00000539365 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 KCNA3P22001 575 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
PTPN6-213ENST00000539365 CLEC4GQ6UXB4 293 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 SETDB2Q96T68 719 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 BABAM1Q9NWV8 329 aa18.11■□□□□ 0.49
PTPN6-213ENST00000539365 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
PTPN6-213ENST00000539365 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
PTPN6-213ENST00000539365 TBC1D9BQ66K14 1250 aa18.1■□□□□ 0.49
PTPN6-213ENST00000539365 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
PTPN6-213ENST00000539365 PDZRN3Q9UPQ7 1066 aa18.1■□□□□ 0.49
PTPN6-213ENST00000539365 ZNF652Q9Y2D9 606 aa18.1■□□□□ 0.49
PTPN6-213ENST00000539365 RGL2O15211 777 aa18.09■□□□□ 0.49
PTPN6-213ENST00000539365 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
PTPN6-213ENST00000539365 CAMTA2O94983 1202 aa18.09■□□□□ 0.49
PTPN6-213ENST00000539365 H0YIN7 160 aa18.08■□□□□ 0.48
PTPN6-213ENST00000539365 NPHP1O15259 732 aa18.08■□□□□ 0.48
PTPN6-213ENST00000539365 CHRNA5P30532 468 aa18.08■□□□□ 0.48
PTPN6-213ENST00000539365 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.48
PTPN6-213ENST00000539365 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
PTPN6-213ENST00000539365 NBPF26B4DH59 902 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 PDE6BP35913 854 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 PIP4K2AP48426 406 aaPredicted RBP18.07■□□□□ 0.48
PTPN6-213ENST00000539365 NEUROD2Q15784 382 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
PTPN6-213ENST00000539365 CCDC146Q8IYE0 955 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 BRIP1Q9BX63 1249 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
PTPN6-213ENST00000539365 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
PTPN6-213ENST00000539365 C2CD5Q86YS7 1000 aa18.05■□□□□ 0.48
PTPN6-213ENST00000539365 GPBP1L1Q9HC44 474 aaPredicted RBP18.05■□□□□ 0.48
PTPN6-213ENST00000539365 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
PTPN6-213ENST00000539365 ST5P78524 1137 aa18.04■□□□□ 0.48
PTPN6-213ENST00000539365 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
PTPN6-213ENST00000539365 TTLL6Q8N841 843 aa18.04■□□□□ 0.48
PTPN6-213ENST00000539365 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
PTPN6-213ENST00000539365 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
PTPN6-213ENST00000539365 TPTE2Q6XPS3 522 aa18.03■□□□□ 0.48
PTPN6-213ENST00000539365 ERBB4Q15303 1308 aa18.02■□□□□ 0.48
PTPN6-213ENST00000539365 ERVV-1B6SEH8 477 aa18.02■□□□□ 0.48
PTPN6-213ENST00000539365 NBPF5PQ86XG9 351 aaPredicted RBP18.02■□□□□ 0.48
PTPN6-213ENST00000539365 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
PTPN6-213ENST00000539365 ATP10DQ9P241 1426 aa18.02■□□□□ 0.48
PTPN6-213ENST00000539365 NIP7Q9Y221 180 aaKnown RBP eCLIP18.02■□□□□ 0.48
PTPN6-213ENST00000539365 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
PTPN6-213ENST00000539365 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
PTPN6-213ENST00000539365 N4BP2Q86UW6 1770 aaPredicted RBP18.01■□□□□ 0.47
PTPN6-213ENST00000539365 UTRNP46939 3433 aa18■□□□□ 0.47
PTPN6-213ENST00000539365 CHL1O00533 1208 aa18■□□□□ 0.47
PTPN6-213ENST00000539365 MYL6BP14649 208 aa18■□□□□ 0.47
PTPN6-213ENST00000539365 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
PTPN6-213ENST00000539365 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
PTPN6-213ENST00000539365 EIF2S2P20042 333 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms